Kinetic measurements on single-molecule disulfide bond cleavage

Journal of the American Chemical Society

Volumn 133, Issue 10, 2011, Pages 3528-3534

  Liang, Jian ^a,b   Fernández, Julio M ^a  

^a Och Spine at New York Presbyterian Hospitals   (United States)

^b TEMPLE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACCELERATING EFFECT; ARRHENIUS KINETIC PARAMETERS; CONTROLLED TEMPERATURE; DISULFIDE BONDS; DITHIOTHREITOL; FORCE CLAMP; KINETIC MEASUREMENT; MECHANICAL AND THERMAL EFFECTS; MECHANICAL FORCE; NUCLEOPHILIC SUBSTITUTIONS; NUCLEOPHILICITIES; ROOM TEMPERATURE; SINGLE BOND; SINGLE-MOLECULE; TRANSITION STATE THEORIES; TRIS(2-CARBOXYETHYL) PHOSPHINE; TWO PARAMETER;

ACTIVATION ENERGY; CHEMICAL REACTIONS; COVALENT BONDS; HYDRAULIC STRUCTURES; PHOSPHORUS COMPOUNDS; REACTION RATES;

MOLECULES;

DITHIOTHREITOL; PHOSPHINE DERIVATIVE; POLYPEPTIDE;

ANALYTICAL PARAMETERS; ARTICLE; ATOM; CHEMICAL REACTION KINETICS; CHEMICAL STRUCTURE; DISULFIDE BOND; ENERGY; FORCE; NUCLEOPHILICITY; PREDICTION; ROOM TEMPERATURE; SINGLE MOLECULE FORCE CLAMP SPECTROSCOPY; SPECTROSCOPY; SUBSTITUTION REACTION;

DISULFIDES; DITHIOTHREITOL; KINETICS; PHOSPHINES; PROTEIN FOLDING; PROTEINS; SPECTRUM ANALYSIS;

EID: 79952584786     PISSN: 00027863     EISSN: 15205126     Source Type: Journal    
DOI: 10.1021/ja109684q     Document Type: Article

References (42)

1. Eigler, D. M.; Schweizer, E. K. Nature 1990, 344, 524
2. Rief, M.; Gautel, M.; Oesterhelt, F.; Fernández, J. M.; Gaub, H. E. Science 1997, 276, 1109
3. Xie, X. S.; Trautman, J. K. Annu. Rev. Phys. Chem. 1998, 49, 441
4. Weiss, S. Science 1999, 283, 1676
5. Zhuang, X.; Bartley, L. E.; Babcock, H. P.; Russell, R.; Ha, T.; Herschlag, D.; Chu, S. Science 2000, 288, 2048
6. Bustamante, C.; Smith, S. B.; Liphardt, J.; Smith, D. Curr. Opin. Struct. Biol. 2000, 10, 279
7. Abbondanzieri, E. A.; Greenleaf, W. J.; Shaevitz, J. W.; Landick, R.; Block, S. M. Nature 2005, 438, 460
8. Smith, S. B.; Finzi, L.; Bustamante, C. Science 1992, 258, 1122
9. Strick, T. R.; Croquette, V.; Bensimon, D. Nature 2000, 404, 901
10. Kneipp, K.; Wang, Y.; Kneipp, H.; Perelman, L. T.; Itzkan, I.; Dasari, R.; Feld, M. S. Phys. Rev. Lett. 1997, 78, 1667
11. Nie, S. M.; Emery, S. R. Science 1997, 275, 1102
12. Hla, S.-W.; Bartels, L.; Meyer, G.; Rieder, K.-H. Phys. Rev. Lett. 2000, 85, 2777
13. Schlierf, M.; Rief, M. J. Mol. Biol. 2005, 354, 497
14. Honciuc, A.; Howard, A. L.; Schwartz, D. K. J. Phys. Chem. C 2009, 113, 2078
15. Honciuc, A.; Harant, A. W.; Schwartz, D. K. Langmuir 2008, 24, 6562
16. Baber, A. E.; Tierney, H. L.; Sykes, E. C. H. ACS Nano 2008, 2, 2385
17. Wiita, A. P.; Ainavarapu, S. R. K.; Huang, H. H.; Fernández, J. M. Proc. Natl. Acad. Sci. U.S.A. 2006, 103, 7222
18. Wiita, A. P.; Perez-Jimenez, R.; Walther, K. A.; Gräter, F.; Berne, B. J.; Holmgren, A.; Sanchez-Ruiz, J. M.; Fernández, J. M. Nature 2007, 450, 124
19. Liang, J.; Fernández, J. M. ACS Nano 2009, 3, 1628
20. Bustanji, Y.; Samorì, B. Angew. Chem., Int. Ed. 2002, 41, 1546
21. Brown, A. E. X.; Litvinov, R. I.; Discher, D. E.; Weisel, J. W. Biophys. J. 2007, 92, L39
22. Peng, Q.; Li, H. B. J. Am. Chem. Soc. 2010, 131, 13347
23. Kersey, F. R.; Yount, W. C.; Craig, S. L. J. Am. Chem. Soc. 2006, 128, 3886
24. Guo, S. L.; Li, N.; Lad, N.; Ray, C.; Akhremitchev, B. B. J. Am. Chem. Soc. 2010, 132, 9681
25. Bell, G. I. Science 1978, 200, 618
26. Ainavarapu, S. R. K.; Wiita, A. P.; Dougan, L.; Uggerud, E.; Fernández, J. M. J. Am. Chem. Soc. 2008, 130, 6479
27. Sun, L. P.; Song, K. Y.; Hase, W. L. Science 2002, 296, 875
28. Mikosch, J.; Trippel, S.; Eichhorn, C.; Otto, R.; Lourderaj, U.; Zhang, J. X.; Hase, W. L.; Weidemuller, M.; Wester, R. Science 2008, 319, 183
29. Fernández, I.; Frenking, G.; Uggerud, E. Chem.-Eur. J. 2009, 15, 2166
30. Carrion-Vazquez, M.; Oberhauser, A. F.; Fisher, T. E.; Marszalek, P. E.; Li, H. B.; Fernández, J. M. Prog. Biophys. Mol. Biol. 2000, 74, 63
31. Ainavarapu, S. R. K.; Wiita, A. P.; Huang, H. H.; Fernández, J. M. J. Am. Chem. Soc. 2008, 130, 436
32. Schlierf, M.; Li, H.; Fernández, J. M. Proc. Natl. Acad. Sci. U.S.A. 2004, 101, 7299
33. Yang, Y.; Lin, F. C.; Yang, G. L. Rev. Sci. Instrum. 2006, 77, 5
34. Lide, D. R., Ed.; CRC Handbook of Chemistry and Physics, 90 th ed. (Internet Version 2010); CRC Press/Taylor and Francis: Boca Raton, FL, 2009; pp 8 - 40.
35. Laidler, K. J.; Glasston, S.; Eyring, H. J. Chem. Phys. 1940, 8, 659
36. Iglesia, E.; Boudart, M. J. Phys. Chem. 1986, 90, 5272
37. Zhdanov, V. P. Surf. Sci. Rep. 1991, 12, 183
38. Dmitrenko, O.; Thorpe, C.; Bach, R. D. J. Org. Chem. 2007, 72, 8298
39. Chandrasekhar, J.; Smith, S. F.; Jorgensen, W. L. J. Am. Chem. Soc. 1984, 106, 3049
40. Shaik, S. S. J. Am. Chem. Soc. 1984, 106, 1227
41. Tinoco, I., Jr.; Bustamante, C. Biophys. Chem. 2002, 101-102, 513
42. Garcia-Manyes, S.; Liang, J.; Szoszkiewicz, R.; Kuo, T.-L.; Fernández, J. M. Nat. Chem. 2009, 1, 236