Development of an RNA detection system using bioluminescence resonance energy transfer

Sensors and Actuators, B: Chemical

Volumn 152, Issue 2, 2011, Pages 277-284

  Andou, Takashi ^a   Endoh, Tamaki ^b   Mie, Masayasu ^a   Kobatake, Eiry ^a  

^a TOKYO INSTITUTE OF TECHNOLOGY   (Japan)

^b KONAN UNIVERSITY   (Japan)

Author keywords

Arginine Rich Motif peptide; Bioluminescence resonance energy transfer; Fluorescent protein; Renilla luciferase; RNA detection

Indexed keywords

BIOLUMINESCENCE RESONANCE ENERGY TRANSFER; CONFORMATIONAL TRANSITIONS; ENHANCED YELLOW FLUORESCENCE PROTEIN; FLUORESCENT PROTEIN; PEPTIDE BINDING; RECOMBINANT PROTEIN; RENILLA LUCIFERASE; RNA BINDING; RNA DETECTION; RNA MOTIFS; RNA SEQUENCES;

AMINO ACIDS; ARGININE; BINDING ENERGY; BIOLUMINESCENCE; ENERGY TRANSFER; FLUORESCENCE; PEPTIDES; PHOSPHORESCENCE; PROBES; RESONANCE; RNA;

NUCLEIC ACIDS;

EID: 79952456112     PISSN: 09254005     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.snb.2010.12.020     Document Type: Article

References (42)

1. S. Tyagi, and F.R. Kramer Nat. Biotechnol. 14 1996 303 308
2. J. Perlette, and W. Tan Anal. Chem. 73 2001 5544 5550
3. D.L. Sokol, X. Zhang, P. Lu, and A.M. Gewirtz Proc. Natl. Acad. Sci. U. S. A. 95 1998 11538 11543
4. D.P. Bratu, B.J. Cha, M.M. Mhlanga, F.R. Kramer, and S. Tyagi Proc. Natl. Acad. Sci. U. S. A. 100 2003 13308 13313
5. N. Nitin, P.J. Santangelo, G. Kim, S. Nie, and G. Bao Nucleic Acids Res. 32 2004 e58
6. A. Calapez, H.M. Pereira, A. Calado, J. Braga, J. Rino, C. Carvalho, J.P. Tavanez, E. Wahle, A.C. Rosa, and M. Carmo-Fonseca J. Cell Biol. 159 2002 795 805
7. L. Haim, G. Zipor, S. Aronov, and J.E. Gerst Nat. Methods 4 2007 409 412
8. S. Lange, Y. Katayama, M. Schmid, O. Burkacky, C. Brauchle, D.C. Lamb, and R.P. Jansen Traffic 9 2008 1256 1267
9. I. Golding, and E.C. Cox Proc. Natl. Acad. Sci. U. S. A. 101 2004 11310 11315
10. A.J. Rodriguez, J. Condeelis, R.H. Singer, and J.B. Dictenberg Semin. Cell Dev. Biol. 18 2007 202 208
11. E. Querido, and P. Chartrand Method Cell Biol. 85 2008 273 292
12. E. Bertrand, P. Chartrand, M. Schaefer, S.M. Shenoy, R.H. Singer, and R.M. Long Mol. Cell 2 1998 437 445
13. V.L. Zimyanin, K. Belaya, J. Pecreaux, M.J. Gilchrist, A. Clark, I. Davis, and D. St Johnston Cell 134 2008 843 853
14. D. Fusco, N. Accornero, B. Lavoie, S.M. Shenoy, J.M. Blanchard, R.H. Singer, and E. Bertrand Curr. Biol. 13 2003 161 167
15. M. Valencia-Burton, R.M. McCullough, C.R. Cantor, and N.E. Broude Nat. Methods 4 2007 421 427
16. O. Rackham, and C.M. Brown EMBO J. 23 2004 3346 3355
17. T. Ozawa, Y. Natori, M. Sato, and Y. Umezawa Nat. Methods 4 2007 413 419
18. G. Lu, S.J. Dolgner, and T.M. Hall Curr. Opin. Struct. Biol. 19 2009 110 115
19. C.G. Cheong, and T.M. Hall Proc. Natl. Acad. Sci. U. S. A. 103 2006 13635 13639
20. T. Andou, T. Endoh, M. Mie, and E. Kobatake Anal. Bioanal. Chem. 393 2009 661 668
21. T. Endoh, H. Funabashi, M. Mie, and E. Kobatake Anal. Chem. 77 2005 4308 4314
22. T. Endoh, M. Mie, H. Funabashi, T. Sawasaki, Y. Endo, and E. Kobatake Bioconjugate Chem. 18 2007 956 962
23. Y. Xu, D.W. Piston, and C.H. Johnson Proc. Natl. Acad. Sci. U. S. A. 96 1999 151 156
24. V. Baubet, H. Le Mouellic, A.K. Campbell, E. Lucas-Meunier, P. Fossier, and P. Brulet Proc. Natl. Acad. Sci. U. S. A. 97 2000 7260 7265
25. K.D. Pfleger, J.R. Dromey, M.B. Dalrymple, E.M. Lim, W.G. Thomas, and K.A. Eidne Cell. Signal. 18 2006 1664 1670
26. X. Xu, M. Soutto, Q. Xie, S. Servick, C. Subramanian, A.G. von Arnim, and C.H. Johnson Proc. Natl. Acad. Sci. U. S. A. 104 2007 10264 10269
27. A. De, and S.S. Gambhir FASB J. 19 2005 2017 2019
28. Z.F. Walls, and S.S. Gambhir Bioconjugate Chem. 19 2008 178 184
29. R. Tan, and A.D. Frankel Biochemistry 33 1994 14579 14585
30. J.L. Battiste, H. Mao, N.S. Rao, R. Tan, D.R. Muhandiram, L.E. Kay, A.D. Frankel, and J.R. Williamson Science 273 1996 1547 1551
31. W. Xu, and A.D. Ellington Proc. Natl. Acad. Sci. U. S. A. 93 1996 7475 7480
32. X. Ye, A. Gorin, R. Frederick, W. Hu, A. Majumdar, W. Xu, G. McLendon, A. Ellington, and D.J. Patel Chem. Biol. 6 1999 657 669
33. J.D. Puglisi, L. Chen, S. Blanchard, and A.D. Frankel Science 270 1995 1200 1203
34. V. Calabro, M.D. Daugherty, and A.D. Frankel Proc. Natl. Acad. Sci. U. S. A. 102 2005 6849 6854
35. L. Chen, and A.D. Frankel Proc. Natl. Acad. Sci. U. S. A. 92 1995 5077 5081
36. C.A. Smith, V. Calabro, and A.D. Frankel Mol. Cell 6 2000 1067 1076
37. J.Y. Su, R.S. Hodges, and C.M. Kay Biochemistry 33 1994 15501 15510
38. S. Marqusee, and R.L. Baldwin Proc. Natl. Acad. Sci. U. S. A. 84 1987 8898 8902
39. R. Arai, W. Wriggers, Y. Nishikawa, T. Nagamune, and T. Fujisawa Proteins 57 2004 829 838
40. W. Wriggers, S. Chakravarty, and P.A. Jennings Biopolymers 80 2005 736 746
41. T.H. Evers, E.M. van Dongen, A.C. Faesen, E.W. Meijer, and M. Merkx Biochemistry 45 2006 13183 13192
42. I. Schoen, H. Krammer, and D. Braun Proc. Natl. Acad. Sci. U. S. A. 106 2009 21649 21654