Identification of bacteria in culture negative and polymerase chain reaction (PCR) positive intraocular specimen from patients with infectious endopthalmitis

Journal of Microbiological Methods

Volumn 85, Issue 1, 2011, Pages 47-52

  Aarthi, Pasupathi ^a   Harini, Rajagopal ^a   Sowmiya, Murali ^a   Malathi, Jambulingam ^a   Therese, K Lily ^a   Madhavan, Hajib N ^a  

^a Sankara Nethralaya   (India)

Author keywords

DHPLC; DNA sequencing; Infectious endophthalmitis

Indexed keywords

BACTERIAL DNA;

AQUEOUS HUMOR; ARTICLE; BACTERIAL INFECTION; BACTERIUM CULTURE; BACTERIUM DETECTION; BACTERIUM IDENTIFICATION; CONTROLLED STUDY; DNA SEQUENCE; ENDOPHTHALMITIS; EUBACTERIUM; GENE AMPLIFICATION; GRAM NEGATIVE BACTERIUM; GRAM POSITIVE BACTERIUM; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; HUMAN; NONHUMAN; PRIORITY JOURNAL; VITREOUS BODY;

BACTERIA; BACTERIOLOGICAL TECHNIQUES; CHROMATOGRAPHY, HIGH PRESSURE LIQUID; DNA, BACTERIAL; EYE INFECTIONS, BACTERIAL; HUMANS; POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA;

BACTERIA (MICROORGANISMS); POSIBACTERIA;

EID: 79952444214     PISSN: 01677012     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mimet.2011.01.010     Document Type: Article

References (22)

1. Callegan Michelle C., Michael Engelbert, Parke David W., Jett Bradley D., Gilmore Michael S. Bacterial endophthalmitis: epidemiology, therapeutics, and bacterium host interactions. Clin. Microbiol. Rev. 2002, 15:111-124. Jan.
2. Cristina Viana-Niero, Perini Guilherme F., Carolina Kassab, Martino Marinês D.V., Jacyr Pasternak Bacteremia possibly caused by Curtobacterium spp found in a blood culture from a central venous line of a pediatric leukemia patient who underwent bone marrow transplantation. Rev. Bras. Hematol. Hemoter. 2009, 31(3):205-206.
3. Cruciani M., Malena M., Amalfitano G., et al. Molecular epidemiology in a cluster of cases of postoperative Pseudomonas aeruginosa endophthalmitis. Clin. Infect. Dis. Feb 1998, 26(2):330-333.
4. Goldenberg O., Herrmann S., Marjoram G., Noyer-Weidner M., Hong G., Bereswill S., Göbel U.B. Molecular monitoring of the intestinal flora by denaturing high performance liquid chromatography. J. Microbiol. Methods 2007, 68:94-105.
5. Guido Funke, Max Aravena-Roman, Reinhard Frodl First description of Curtobacterium spp. isolated from human clinical specimens. J. Clin. Microbiol. March 2005, 43(3):1032-1036.
6. Holmes Barry, Segers Paul, Coenye Tom, Vancanneyt Marc, Vandamme Peter Pannonibacter phragmitetus, described from a Hungarian soda lake in 2003, had been recognized several decades earlier from human blood cultures as Achromobacter groups B and E. Int. J. Syst. Evol. Microbiol. 2006, 56:2945-2948.
7. Huber C.G., Oefner P.J., Bonn G.K. Anal. Biochem. 1993, 212:351.
8. Huber, C.G., Oefner, P.J. and Bonn, G.K., U.S. 1996,Patent No. 5,585,236.
9. Hykin P.G., Tobal K., McIntyre G., et al. The diagnosis of delayed post-operative endophthalmitis by polymerase chain reaction of bacterial DNA in vitreous samples. J. Med. Microbiol. 1994, 40:408-415.
10. Julien Loubinoux, Bernard Rio, Liliana Mihaila, Elena Fois, Anne Le Fleche, Grimont Patrick A.D., Jean-Pierre Marie, Anne Bouvet Bacteremia caused by an undescribed species of Janibacter. J. Clin. Microbiol. 2005, 3564-3566. july.
11. Le Maréchal C., Audrézet M.P., Quéré I., Raguénès O., Langonné S., Férec C. Complete and rapid scanning of the cystic fibrosis transmembrane conductance regulator (CFTR) gene by denaturing high-performance liquid chromatography (D-HPLC): major implications for genetic counseling. Hum. Genet 2001, 108:290-298.
12. Martin K., Schumann P., Rainey F.A., Schuetze B., Groth I. Janibacter limosus gen. nov., sp. nov., a new actinomycete with meso-diaminopimelic acid in the cell wall. Int. J. Syst. Bacteriol. 1997, 47:529-534.
13. Premstaller A., Oefner P.J. Denaturing high performance liquid chromatography. Methods. Mol. Biol. 2003, 212:15-35.
14. Reischl Udo, Melzl Holger, Kroppenstedt Reiner M., Miethke Thomas, Naumann Ludmila, Mariottini Alessandro, Mazzarelli Gianna, Tortoli Enrico Mycobacterium monacense sp. Int. J. Syst. Evol. Microbiol. 2006, 56:2575-2578. Nov.
15. Rudolph J.G., White S., Sokolsky C., Bozak D., Mazzanti C., Lipsky R.H., Goldman D. Determination of melting temperature for variant detection using dHPLC: a comparison between an empirical approach and DNA melting prediction software. Genet. Test. Fall 2002, 6(3):169-176.
16. Scola B.L., Raoult D. Molecular identification ofGemellaspecies from three patients with endocarditis. J. Clin. Microbiol. 1998, 36:866-871.
17. Scott I.U., Flynn H.W., Feuer W., et al. Endophthalmitis associated with microbial keratitis. Ophthalmology 1996, 103:1864-1870.
18. Therese K.L., Anand A.R., Madhavan H.N. Polymerase chain reaction in the diagnosis of bacterial endopthalmitis. Br. J. Ophthalmol. 1998, 82:1078-1082.
19. Therese K.L., Bartell J.G., Bagyalakshmi R., Dajcs J.G., Stroman D.W., Madhavan H.N. ARVO abstract, 1890-B251, etiology of endophthalmitis from culture-negative specimens 2006.
20. Vernazza, P.L., Bodmer, T., Galeazzi, R.L., Schweiz Med Wochenschr.1991 Jul Rhodococcus erythropolis infection in HIV-associated immunodeficiency 27;121(30):1095-8.
21. Vianna M.E., Horz H.P., Gomes B.P., Conrads G. Microarrays complement culture methods for identification of bacteria in endodontic infections. Oral Microbiol. Immunol. 2005, 20:253-258.
22. Vianna M.E., Conrads G., Gomes B.P.F.A., Horz H.P. Identification and quantification of archaea involved in primary endodontic infections. J. Clin. Microbiol. 2006 April, 44(4):1274-1282.