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Volumn 85, Issue 1, 2011, Pages 28-32

Trinucleotide repeat sequence-based PCR as a potential approach for genotyping Mycobacterium gordonae strains

Author keywords

Epidemiology; ERIC; Genotyping; M. gordonae; TRS

Indexed keywords

GENOMIC DNA;

EID: 79952363973     PISSN: 01677012     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mimet.2011.01.001     Document Type: Article
Times cited : (9)

References (33)
  • 1
    • 71549129518 scopus 로고    scopus 로고
    • (CGG)4-based PCR as a novel tool for uropathogenic Escherichia coli discrimination: comparison with ERIC-PCR
    • Adamus-Bialek W., Wojtasik A., Majchrzak M., Sosnowski M., Parniewski P. (CGG)4-based PCR as a novel tool for uropathogenic Escherichia coli discrimination: comparison with ERIC-PCR. J. Clin. Microbiol. 2009, 47(12):3937-3944.
    • (2009) J. Clin. Microbiol. , vol.47 , Issue.12 , pp. 3937-3944
    • Adamus-Bialek, W.1    Wojtasik, A.2    Majchrzak, M.3    Sosnowski, M.4    Parniewski, P.5
  • 2
    • 0034879415 scopus 로고    scopus 로고
    • Identification of 54 mycobacterial species by PCR-restriction fragment length polymorphism analysis of the hsp65 gene
    • Brunello F., Ligozzi M., Cristelli E., Bonora S., Tortoli E., Fontana R. Identification of 54 mycobacterial species by PCR-restriction fragment length polymorphism analysis of the hsp65 gene. J. Clin. Microbiol. 2001, 39:2799-2806.
    • (2001) J. Clin. Microbiol. , vol.39 , pp. 2799-2806
    • Brunello, F.1    Ligozzi, M.2    Cristelli, E.3    Bonora, S.4    Tortoli, E.5    Fontana, R.6
  • 4
    • 0033965767 scopus 로고    scopus 로고
    • Clinical and chest radiographic findings among persons with sputum culture positive for Mycobacterium gordonae: a review of 19 cases
    • Eckburg P.B., Buadu E.O., Stark P., Sarinas P.S., Chitkara R.K., Kuschner W.G. Clinical and chest radiographic findings among persons with sputum culture positive for Mycobacterium gordonae: a review of 19 cases. Chest 2000, 117:96-102.
    • (2000) Chest , vol.117 , pp. 96-102
    • Eckburg, P.B.1    Buadu, E.O.2    Stark, P.3    Sarinas, P.S.4    Chitkara, R.K.5    Kuschner, W.G.6
  • 5
    • 1542712358 scopus 로고    scopus 로고
    • IS900/ERIC-PCR as a tool to distinguish Mycobacterium avium subsp. paratuberculosis from closely related mycobacteria
    • Englund S. IS900/ERIC-PCR as a tool to distinguish Mycobacterium avium subsp. paratuberculosis from closely related mycobacteria. Vet. Microbiol. 2003, 96:277-287.
    • (2003) Vet. Microbiol. , vol.96 , pp. 277-287
    • Englund, S.1
  • 6
    • 0028796385 scopus 로고
    • A novel insertion element from Mycobacterium avium, IS1245, is a specific target for analysis of strain relatedness
    • Guerrero C., Bernasconi C., Burki D., Bodmer T., Telenti A. A novel insertion element from Mycobacterium avium, IS1245, is a specific target for analysis of strain relatedness. J. Clin. Microbiol. 1995, 33:304-307.
    • (1995) J. Clin. Microbiol. , vol.33 , pp. 304-307
    • Guerrero, C.1    Bernasconi, C.2    Burki, D.3    Bodmer, T.4    Telenti, A.5
  • 7
    • 0020047116 scopus 로고
    • Synergistic effect of rifampin, streptomycin, ethionamide, and ethambutol on Mycobacterium intracellulare
    • Heifets L.B. Synergistic effect of rifampin, streptomycin, ethionamide, and ethambutol on Mycobacterium intracellulare. Am. Rev. Respir. Dis. 1982, 125:43-48.
    • (1982) Am. Rev. Respir. Dis. , vol.125 , pp. 43-48
    • Heifets, L.B.1
  • 8
    • 0023738045 scopus 로고
    • Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity
    • Hunter P.R., Gaston M.A. Numerical index of the discriminatory ability of typing systems: an application of Simpson's index of diversity. J. Clin. Microbiol. 1988, 26:2465-2466.
    • (1988) J. Clin. Microbiol. , vol.26 , pp. 2465-2466
    • Hunter, P.R.1    Gaston, M.A.2
  • 9
    • 0034095046 scopus 로고    scopus 로고
    • Improved repetitive-element PCR fingerprinting for resolving pathogenic and nonpathogenic phylogenetic groups within Escherichia coli
    • Johnson J.R., O'Bryan T.T. Improved repetitive-element PCR fingerprinting for resolving pathogenic and nonpathogenic phylogenetic groups within Escherichia coli. Clin. Diagn. Lab. Immunol. 2000, 7:265-273.
    • (2000) Clin. Diagn. Lab. Immunol. , vol.7 , pp. 265-273
    • Johnson, J.R.1    O'Bryan, T.T.2
  • 10
    • 8644226072 scopus 로고    scopus 로고
    • Infections due to non-tuberculous mycobacteria (NTM)
    • Katoch V.M. Infections due to non-tuberculous mycobacteria (NTM). Indian J. Med. Res. 2004, 120:290-304.
    • (2004) Indian J. Med. Res. , vol.120 , pp. 290-304
    • Katoch, V.M.1
  • 11
    • 0026524473 scopus 로고
    • Microheterogeneity within rRNA of Mycobacterium gordonae
    • Kirschner P., Bottger E.C. Microheterogeneity within rRNA of Mycobacterium gordonae. J. Clin. Microbiol. 1992, 30:1049-1050.
    • (1992) J. Clin. Microbiol. , vol.30 , pp. 1049-1050
    • Kirschner, P.1    Bottger, E.C.2
  • 12
    • 31544479243 scopus 로고    scopus 로고
    • Diagnosis and treatment of nontuberculous mycobacterial pulmonary diseases: a Korean perspective
    • Koh W.J., Kwon O.J., Lee K.S. Diagnosis and treatment of nontuberculous mycobacterial pulmonary diseases: a Korean perspective. J. Korean Med. Sci. 2005, 20:913-925.
    • (2005) J. Korean Med. Sci. , vol.20 , pp. 913-925
    • Koh, W.J.1    Kwon, O.J.2    Lee, K.S.3
  • 13
    • 0032843724 scopus 로고    scopus 로고
    • The dnaA gene region of Mycobacterium avium and the autonomous replication activities of its 5' and 3' flanking regions
    • Madiraju M.V., Qin M.H., Yamamoto K., Atkinson M.A., Rajagopalan M. The dnaA gene region of Mycobacterium avium and the autonomous replication activities of its 5' and 3' flanking regions. Microbiology 1999, 145:2913-2921.
    • (1999) Microbiology , vol.145 , pp. 2913-2921
    • Madiraju, M.V.1    Qin, M.H.2    Yamamoto, K.3    Atkinson, M.A.4    Rajagopalan, M.5
  • 14
    • 0036740665 scopus 로고    scopus 로고
    • Epidemiology of human pulmonary infection with nontuberculous mycobacteria
    • Marras T.K., Daley C.L. Epidemiology of human pulmonary infection with nontuberculous mycobacteria. Clin. Chest Med. 2002, 23:553-567.
    • (2002) Clin. Chest Med. , vol.23 , pp. 553-567
    • Marras, T.K.1    Daley, C.L.2
  • 15
    • 0037231954 scopus 로고    scopus 로고
    • Identification of Mycobacterium avium genotypes with distinctive traits by combination of IS1245-based restriction fragment length polymorphism and restriction analysis of hsp65
    • Oliveira R.S., Sircili M.P., Oliveira E.M., Balian S.C., Ferreira-Neto J.S., Leao S.C. Identification of Mycobacterium avium genotypes with distinctive traits by combination of IS1245-based restriction fragment length polymorphism and restriction analysis of hsp65. J. Clin. Microbiol. 2003, 41:44-49.
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 44-49
    • Oliveira, R.S.1    Sircili, M.P.2    Oliveira, E.M.3    Balian, S.C.4    Ferreira-Neto, J.S.5    Leao, S.C.6
  • 17
    • 0031863892 scopus 로고    scopus 로고
    • Characterization of IS1245 for strain typing of Mycobacterium avium
    • Pestel-Caron M., Arbeit R.D. Characterization of IS1245 for strain typing of Mycobacterium avium. J. Clin. Microbiol. 1998, 36:1859-1863.
    • (1998) J. Clin. Microbiol. , vol.36 , pp. 1859-1863
    • Pestel-Caron, M.1    Arbeit, R.D.2
  • 18
    • 0030929256 scopus 로고    scopus 로고
    • Identification and characterization of IS-like elements in Mycobacterium gordonae
    • Picardeau M., Bull T.J., Vincent V. Identification and characterization of IS-like elements in Mycobacterium gordonae. FEMS Microbiol. Lett. 1997, 154:95-102.
    • (1997) FEMS Microbiol. Lett. , vol.154 , pp. 95-102
    • Picardeau, M.1    Bull, T.J.2    Vincent, V.3
  • 19
    • 0026639504 scopus 로고
    • Differentiation of slowly growing Mycobacterium species, including Mycobacterium tuberculosis, by gene amplification and restriction fragment length polymorphism analysis
    • Plikaytis B.B., Plikaytis B.D., Yakrus M.A., Butler W.R., Woodley C.L., Silcox V.A., et al. Differentiation of slowly growing Mycobacterium species, including Mycobacterium tuberculosis, by gene amplification and restriction fragment length polymorphism analysis. J. Clin. Microbiol. 1992, 30:1815-1822.
    • (1992) J. Clin. Microbiol. , vol.30 , pp. 1815-1822
    • Plikaytis, B.B.1    Plikaytis, B.D.2    Yakrus, M.A.3    Butler, W.R.4    Woodley, C.L.5    Silcox, V.A.6
  • 20
    • 23744508419 scopus 로고    scopus 로고
    • Comparison of five repetitive-sequence-based PCR typing methods for molecular discrimination of Salmonella enterica isolates
    • Rasschaert G., Houf K., Imberechts H., Grijspeerdt K., De Zutter L., Heyndrickx M. Comparison of five repetitive-sequence-based PCR typing methods for molecular discrimination of Salmonella enterica isolates. J. Clin. Microbiol. 2005, 43:3615-3623.
    • (2005) J. Clin. Microbiol. , vol.43 , pp. 3615-3623
    • Rasschaert, G.1    Houf, K.2    Imberechts, H.3    Grijspeerdt, K.4    De Zutter, L.5    Heyndrickx, M.6
  • 21
    • 0031465701 scopus 로고    scopus 로고
    • Cutaneous infection caused by Mycobacterium gordonae in a human immunodeficiency virus-infected patient receiving antimycobacterial treatment
    • Rusconi S., Gori A., Vago L., Marchetti G., Franzetti F. Cutaneous infection caused by Mycobacterium gordonae in a human immunodeficiency virus-infected patient receiving antimycobacterial treatment. Clin. Infect. Dis. 1997, 25:1490-1491.
    • (1997) Clin. Infect. Dis. , vol.25 , pp. 1490-1491
    • Rusconi, S.1    Gori, A.2    Vago, L.3    Marchetti, G.4    Franzetti, F.5
  • 23
    • 0030768990 scopus 로고    scopus 로고
    • Detection of Mycobacterium tuberculosis by PCR analysis of urine and other clinical samples from AIDS and non-HIV-infected patients
    • Sechi L.A., Pinna M.P., Sanna A., Pirina P., Ginesu F., Saba F., et al. Detection of Mycobacterium tuberculosis by PCR analysis of urine and other clinical samples from AIDS and non-HIV-infected patients. Mol. Cell. Probes 1997, 11:281-285.
    • (1997) Mol. Cell. Probes , vol.11 , pp. 281-285
    • Sechi, L.A.1    Pinna, M.P.2    Sanna, A.3    Pirina, P.4    Ginesu, F.5    Saba, F.6
  • 24
    • 0031984589 scopus 로고    scopus 로고
    • Enterobacterial repetitive intergenic consensus sequences as molecular targets for typing of Mycobacterium tuberculosis strains
    • Sechi L.A., Zanetti S., Dupre I., Delogu G., Fadda G. Enterobacterial repetitive intergenic consensus sequences as molecular targets for typing of Mycobacterium tuberculosis strains. J. Clin. Microbiol. 1998, 36:128-132.
    • (1998) J. Clin. Microbiol. , vol.36 , pp. 128-132
    • Sechi, L.A.1    Zanetti, S.2    Dupre, I.3    Delogu, G.4    Fadda, G.5
  • 25
    • 0027514742 scopus 로고
    • Rapid identification of mycobacteria to the species level by polymerase chain reaction and restriction enzyme analysis
    • Telenti A., Marchesi F., Balz M., Bally F., Bottger E.C., Bodmer T. Rapid identification of mycobacteria to the species level by polymerase chain reaction and restriction enzyme analysis. J. Clin. Microbiol. 1993, 31:175-178.
    • (1993) J. Clin. Microbiol. , vol.31 , pp. 175-178
    • Telenti, A.1    Marchesi, F.2    Balz, M.3    Bally, F.4    Bottger, E.C.5    Bodmer, T.6
  • 26
    • 34548080934 scopus 로고    scopus 로고
    • New variable-number tandem-repeat markers for typing Mycobacterium avium subsp. paratuberculosis and M. avium strains: comparison with IS900 and IS1245 restriction fragment length polymorphism typing
    • Thibault V.C., Grayon M., Boschiroli M.L., Hubbans C., Overduin P., Stevenson K., et al. New variable-number tandem-repeat markers for typing Mycobacterium avium subsp. paratuberculosis and M. avium strains: comparison with IS900 and IS1245 restriction fragment length polymorphism typing. J. Clin. Microbiol. 2007, 45:2404-2410.
    • (2007) J. Clin. Microbiol. , vol.45 , pp. 2404-2410
    • Thibault, V.C.1    Grayon, M.2    Boschiroli, M.L.3    Hubbans, C.4    Overduin, P.5    Stevenson, K.6
  • 27
    • 0026323259 scopus 로고
    • Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes
    • Versalovic J., Koeuth T., Lupski J.R. Distribution of repetitive DNA sequences in eubacteria and application to fingerprinting of bacterial genomes. Nucleic Acids Res. 1991, 19:6823-6831.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 6823-6831
    • Versalovic, J.1    Koeuth, T.2    Lupski, J.R.3
  • 29
    • 17344367024 scopus 로고    scopus 로고
    • Nosocomial outbreaks/pseudo-outbreaks caused by nontuberculous mycobacteria
    • 453-90
    • Wallace R.J., Brown B.A., Griffith D.E. Nosocomial outbreaks/pseudo-outbreaks caused by nontuberculous mycobacteria. Annu. Rev. Microbiol. 1998, 52:453-490. 453-90.
    • (1998) Annu. Rev. Microbiol. , vol.52 , pp. 453-490
    • Wallace, R.J.1    Brown, B.A.2    Griffith, D.E.3
  • 30
    • 0025993853 scopus 로고
    • Identification of Mycobacterium gordonae from culture by the Gen-Probe Rapid Diagnostic System: evaluation of 218 isolates and potential sources of false-negative results
    • Walton D.T., Valesco M. Identification of Mycobacterium gordonae from culture by the Gen-Probe Rapid Diagnostic System: evaluation of 218 isolates and potential sources of false-negative results. J. Clin. Microbiol. 1991, 29:1850-1854.
    • (1991) J. Clin. Microbiol. , vol.29 , pp. 1850-1854
    • Walton, D.T.1    Valesco, M.2
  • 31
    • 0026527471 scopus 로고
    • Agents of newly recognized or infrequently encountered mycobacterial diseases
    • Wayne L.G., Sramek H.A. Agents of newly recognized or infrequently encountered mycobacterial diseases. Clin. Microbiol. Rev. 1992, 5:1-25.
    • (1992) Clin. Microbiol. Rev. , vol.5 , pp. 1-25
    • Wayne, L.G.1    Sramek, H.A.2
  • 33
    • 0026045791 scopus 로고
    • Azithromycin for treatment of Mycobacterium avium-intracellulare complex infection in patients with AIDS
    • Young L.S., Wiviott L., Wu M., Kolonoski P., Bolan R., Inderlied C.B. Azithromycin for treatment of Mycobacterium avium-intracellulare complex infection in patients with AIDS. Lancet 1991, 338:1107-1109.
    • (1991) Lancet , vol.338 , pp. 1107-1109
    • Young, L.S.1    Wiviott, L.2    Wu, M.3    Kolonoski, P.4    Bolan, R.5    Inderlied, C.B.6


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