Ultrabright planar optodes for luminescence life-time based microscopic imaging of O2 dynamics in biofilms

Journal of Microbiological Methods

Volumn 85, Issue 1, 2011, Pages 67-74

  Staal, M ^a   Borisov, S M ^b   Rickelt, L F ^a   Klimant, I ^b   Kuhl M ^a,c  

^a UNIVERSITY OF COPENHAGEN   (Denmark)

^b GRAZ UNIVERSITY OF TECHNOLOGY   (Austria)

^c UNIVERSITY OF TECHNOLOGY SYDNEY   (Australia)

Author keywords

Biofilm; Imaging; Luminescence; Microscopy; Optode; Oxygen

Indexed keywords

IRIDIUM; OXYGEN; RUTHENIUM;

ARTICLE; BACTERIAL GROWTH; BIOFILM; BIOGEOCHEMISTRY; BIOMASS; BIOMASS DISTRIBUTION; BIOTECHNOLOGY; FLOW RATE; HETEROTROPHY; MICROSCOPY; MOLECULAR DYNAMICS; NONHUMAN; PRIORITY JOURNAL; SIGNAL NOISE RATIO;

BACTERIA; BIOFILMS; BIOMASS; LUMINESCENT MEASUREMENTS; MICROSCOPY; OXYGEN;

BACTERIA (MICROORGANISMS);

EID: 79952363709     PISSN: 01677012     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mimet.2011.01.021     Document Type: Article

References (31)

1. Amao Y. Probes and polymers for optical sensing of oxygen. Microchim. Acta 2003, 143:1-12.
2. Bedlek-Anslow J.M., Hubner J.P., Carroll B.F., Schanze K.S. Micro-heterogeneous oxygen response in luminescence sensor films. Langmuir 2000, 16:9137-9141.
3. Borisov S.M., Klimant I. Ultrabright oxygen optodes based on cyclometalated lridium(III) coumarin complexes. Anal. Chem. 2007, 79:7501-7509.
4. Carraway E.R., Demas J.N., DeGraff B.A. Luminescence quenching mechanism for microheterogeneous systems. Anal. Chem. 1991, 63:332-336.
5. DeBeer D., Stoodley P., Roe F., Lewandowski Z. Effects of biofilom structures on oxygen distribution and mass-transport. Biotechnol. Bioeng. 1994, 43:1131-1138.
6. DeGraff B.A., Demas J.N. Luminescence-based oxygen sensors. Rev. Fluoresc. 2005, 125-151.
7. DeRosa M.C., Hodgson D.J., Enright G.D., Dawson B., Evans C.E.B., Crutchley R.J. Iridium luminophore complexes for unimolecular oxygen sensors. J. Am. Chem. Soc. 2004, 126:7619-7626.
8. Eaton K., Douglas B., Douglas P. Luminescent oxygen sensors: time-resolved studies and modelling of heterogeneous oxygen quenching of luminescence emission from Pt and Pd octaethylporphyrins in thin polymer films. Sens. Act. B Chem. 2004, 97:2-12.
9. Fenchel T., Finlay B. Oxygen and the spatial structure of microbial communities. Biol. Rev. 2008, 83:553-569.
10. Gerritsen H., Sanders R., Draaijer A., Ince C., Levine Y. Fluorescence lifetime imaging of oxygen in living cells. J. Fluoresc. 1997, 7:11-15.
11. Glud R.N. Oxygen dynamics of marine sediments. Mar. Biol. Res. 2008, 4:243-289.
12. 2 distribution in benthic communities. Mar. Ecol. Prog. Ser. 1996, 140:217-226.
13. Glud R.N., Kühl M., Kohls O., Ramsing N.B. Heterogeneity of oxygen production and consumption in a photosynthetic microbial mat as studied by planar optodes. J. Phycol. 1999, 35:270-279.
14. Holst G., Grunwald B. Luminescence lifetime imaging with transparent oxygen optodes. Sens. Acta B Chem. 2001, 74:78-90.
15. Holst G., Kohls O., Klimant I., König B., Kühl M., Richter T. A modular luminescence lifetime imaging system for mapping oxygen distribution in biological samples. Sens. Acta B Chem. 1998, 51:163-170.
16. Jimenez I.M., Kühl M., Larkum A.W.D., Ralph P.J. Heat budget and thermal microenvironment of shallow-water corals: do massive corals get warmer than branching corals?. Limnol. Oceanogr. 2008, 53:1548-1561.
17. Klimant I., Wolfbeis O.S. Oxygen-sensitive luminescent materials based on silicone-soluble ruthenium diimine complexes. Anal. Chem. 1995, 67:3160-3166.
18. Klimant I., Meyer V., Kühl M. Fiberoptic oxygen microsensors, a new tool in aquatic biology. Limnol. Oceanogr. 1995, 40:1159-1165.
19. Klimant I., Kühl M., Glud R.N., Holst G. Optical measurement of oxygen and temperature in microscale: strategies and biological applications. Sens. Acta B Chem. 1997, 38:29-37.
20. Kühl M. Optical microsensors for analysis of microbial communities. Meth. Enzymol. 2005, 397:166-199.
21. Kühl M., Polerecky L. Functional and structural imaging of phototrophic microbial communities and symbioses. Aquat. Microb. Ecol. 2008, 53:99-118.
22. Kühl M., Rickelt L.F., Thar R. Combined imaging of bacteria and oxygen in biofilms. Appl. Environ. Microbiol. 2007, 73:6289-6295.
23. Liebsch G., Klimant I., Frank B., Holst G., Wolfbeis O.S. Luminescence lifetime imaging of oxygen, pH, and carbon dioxide distribution using optical sensors. Appl. Spectrosc. 2000, 54:548-559.
24. 2 depleted environments. Mar. Chem. 2006, 100:95-107.
25. Pamp S.J., Sternberg C., Tolker-Nielsen T. Insight into the microbial multicellular lifestyle via flow-cell technology and confocal microscopy. Cytom. A 2009, 75A:90-103.
26. Polerecky L., Franke U., Werner U., Grunwald B., de Beer D. High spatial resolution measurement of oxygen consumption rates in permeable sediments. Limnol. Oceanogr. Meth. 2005, 3:75-85.
27. Precht E., Franke U., Polerecky L., Hüttel M. Oxygen dynamics in permeable sediments with wave-driven pore water exchange. Limnol. Oceanogr. 2004, 49:693-705.
28. Rasmussen K., Lewandowski Z. Microelectrode measurements of local mass transport rates in heterogeneous biofilms. Biotechnol. Bioeng. 1998, 59:302-309.
29. Revsbech N.P. Analysis of microbial communities with electrochemical microsensors and microscale biosensors. Meth. Enzymol. 2005, 397:147-166.
30. Schramm A., Larsen L.H., Revsbech N.P., Ramsing N.B., Amann R., Schleifer K.H. Structure and function of a nitrifying biofilm as determined by in situ hybridization and the use of microelectrodes. Appl. Environ. Microbiol. 1996, 62:4641-4647.
31. Wolfbeis O.S. Materials for fluorescence-based optical chemical sensors. J. Mater. Chem. 2005, 15:2657-2669.