Improvement of pesticide mineralization in on-farm biopurification systems by bioaugmentation with pesticide-primed soil

FEMS Microbiology Ecology

Volumn 76, Issue 1, 2011, Pages 64-73

  Sniegowski, Kristel ^a   Bers, Karolien ^a   Van Goetem, Kris ^a   Ryckeboer, Jaak ^a   Jaeken, Peter ^b   Spanoghe, Pieter ^c   Springael, Dirk ^a  

^a UNIVERSITY OF LEUVEN   (Belgium)

^b Ecology Department   (Belgium)

^c GHENT UNIVERSITY   (Belgium)

Author keywords

Bioaugmentation; Biopurification system; Linuron mineralization; Pesticide primed soil; Variovorax

Indexed keywords

BACTERIAL DNA; LINURON; PESTICIDE; RNA 16S;

BIOMINERALIZATION; ELECTROKINESIS; FARMING SYSTEM; MICROCOSM; PESTICIDE; POLYMERASE CHAIN REACTION; SOIL TEST;

AGRICULTURE; ARTICLE; BIOMASS; BIOREMEDIATION; CHEMISTRY; COMAMONADACEAE; COMPARATIVE STUDY; GENETICS; GROWTH, DEVELOPMENT AND AGING; METABOLISM; METHODOLOGY; MICROBIOLOGY; SOIL; SOIL POLLUTANT;

AGRICULTURE; BIODEGRADATION, ENVIRONMENTAL; BIOMASS; COMAMONADACEAE; DNA, BACTERIAL; LINURON; PESTICIDES; RNA, RIBOSOMAL, 16S; SOIL; SOIL MICROBIOLOGY; SOIL POLLUTANTS;

VARIOVORAX;

EID: 79952347231     PISSN: 01686496     EISSN: 15746941     Source Type: Journal    
DOI: 10.1111/j.1574-6941.2010.01031.x     Document Type: Article

References (38)

1. Aslan S & Türkman A (2005) Combined biological removal of nitrate and pesticides using wheat straw as substrates. Process Biochem 40: 934-943.
2. Barbeau C, Deschenes L, Karamanev D, Comeau Y & Samson R (1997) Bioremediation of pentachlorophenol-contaminated soil by bioaugmentation using activated soil. Appl Microbiol Biot 48: 745-752.
3. Bazot S & Lebeau T (2008) Simultaneous mineralization of glyphosate and diuron by a consortium of three bacteria as free- and/or immobilized-cells formulations. Appl Microbiol Biot 77: 1351-1358.
4. Bers K, Sniegowski K, Breugelmans P, Hendrickxs L, Mot RD & Springael D (2011) A molecular toolbox to estimate the number and diversity of Variovorax in the environment: application in soils treated with the phenylurea herbicide linuron. FEMS Microbiol Ecol DOI: DOI: 10.1111/j.1574-6941.2010.01028.x.
5. Breugelmans P, D'huys PJ, De Mot R & Springael D (2007) Characterization of novel linuron-mineralizing bacterial consortia enriched from long-term linuron-treated agricultural soils. FEMS Microbiol Ecol 62: 374-385.
6. Breugelmans P, Horemans B, Hofkens J & Springael D (2010) Response of the structure and activity of a linuron-degrading triple-species biofilm to mixed substrate feeds. Res Microbiol 161: 660-666.
7. ®. J Microbiol Meth 35: 157-161.
8. Broos K, Mertens J & Smolders E (2005) Toxicity of heavy metals in soil assessed with various soil microbial and plant growth assays: a comparative study. Environ Toxicol Chem 24: 634-640.
9. Chatterjee DK, Kilbane JJ & Chakrabarty AM (1982) Biodegradation of 2, 4, 5-trichlorophenoxyacetic acid in soil by a pure culture of Pseudomonas cepacia. Appl Environ Microb 44: 514-516.
10. Coppola L, Castillo MD, Monaci E & Vischetti C (2007) Adaptation of the biobed composition for chlorpyrifos degradation to Southern Europe conditions. J Agr Food Chem 55: 396-401.
11. Cullington JE & Walker A (1999) Rapid biodegradation of diuron and other phenylurea herbicides by a soil bacterium. Soil Biol Biochem 31: 677-686.
12. Dejonghe W, Berteloot E, Goris J, Boon N, Crul K, Maertens S, Hofte M, De Vos P, Verstraete W & Top EM (2003) Synergistic degradation of linuron by a bacterial consortium and isolation of a single linuron-degrading Variovorax strain. Appl Environ Microb 69: 1532-1541.
13. De Wilde T, Spanoghe P, Debaer C, Ryckeboer J, Springael D & Jaeken P (2007) Overview of on-farm bioremediation systems to reduce the occurrence of point source contamination. Pest Manag Sci 63: 111-128.
14. Dumont MG & Murrell JC (2005) Stable isotope probing - linking microbial identity to function. Nat Rev Microbial 3: 499-504.
15. El Fantroussi S, Verschuere L, Verstraete W & Top EM (1999) Effect of phenylurea herbicides on soil microbial communities estimated by analysis of 16S rRNA gene fingerprints and community-level physiological profiles. Appl Environ Microb 65: 982-988.
16. Fogg P, Boxall ABA & Walker A (2003a) Degradation of pesticides in biobeds: the effect of concentration and pesticide mixtures. J Agr Food Chem 51: 5344-5349.
17. Fogg P, Boxall ABA, Walker A & Jukes AA (2003b) Pesticide degradation in a 'biobed' composting substrate. Pest Manag Sci 59: 527-537.
18. Fogg P, Boxall ABA, Walker A & Jukes A (2004) Degradation and leaching potential of pesticides in biobed systems. Pest Manag Sci 60: 645-654.
19. Grigg BC, Assaf NA & Turco RF (1997) Removal of atrazine contamination in soil and liquid systems using bioaugmentation. Pestic Sci 50: 211-220.
20. Grundmann S, Fuss R, Schmid M, Laschinger M, Ruth B, Schulin R, Munch JC & Schroll R (2007) Application of microbial hot spots enhances pesticide degradation in soils. Chemosphere 68: 511-517.
21. Haest PJ, Philips J, Springael D & Smolders E (2010) The reactive transport of trichloroethene is influenced by residence time and microbial numbers. J Contam Hydrol 119: 89-98.
22. Henriksen VV, Helweg A, Spliid NH, Felding G & Stenvang L (2003) Capacity of model biobeds to retain and degrade mecoprop and isoproturon. Pest Manag Sci 59: 1076-1082.
23. Johannesen H, Sorensen SR & Aamand J (2003) Mineralization of soil-aged isoproturon and isoproturon metabolites by Sphingomonas sp strain SRS2. J Environ Qual 32: 1250-1257.
24. Johnsen A, Schmidt S, Hybholt T, Henriksen S, Jacobsen C & Andersen O (2007) Strong impact on the polycyclic aromatic hydrocarbon (PAH)-degrading community of a PAH-polluted soil but marginal effect on PAH degradation when priming with bioremediated soil dominated by mycobacteria. Appl Environ Microb 73: 1474-1480.
25. Mertens B, Boon N & Verstraete W (2006) Slow-release inoculation allows sustained biodegradation of gamma-hexachlorocyclohexane. Appl Environ Microb 72: 622-627.
26. Moran AC, Muller A, Manzano M & Gonzalez B (2006) Simazine treatment history determines a significant herbicide degradation potential in soils that is not improved by bioaugmentation with Pseudomonas sp. ADP. J Appl Microbiol 101: 26-35.
27. Muyzer G, Dewaal EC & Uitterlinden AG (1993) Profiling of complex microbial populations by denaturing gradient gel-electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S ribosomal-RNA. Appl Environ Microb 59: 695-700.
28. Pigeon O, De Vleeschouwer C, Cors F, Weickmans B, De Ruyckel B, Pussemier L, Debognie P & Culot M (2005) Development of biofilters to treat the pesticide wastes from spraying applications. Comm Agr Appl Biol Sci 70: 1003-1012.
29. Runes HB, Jenkins JJ & Bottomley PJ (2001) Atrazine degradation by bioaugmented sediment from constructed wetlands. Appl Microbiol Biot 57: 427-432.
30. Singh BK, Walker A & Wright DJ (2006) Bioremedial potential of fenamiphos and chlorpyrifos degrading isolates: influence of different environmental conditions. Soil Biol Biochem 38: 2682-2693.
31. Sniegowski K, Mertens J, Diels J, Smolders E & Springael D (2009) Inverse modeling of pesticide degradation and pesticide-degrading population size dynamics in a bioremediation system: parameterizing the Monod model. Chemosphere 75: 726-731.
32. Sorensen SR, Rasmussen J, Jacobsen CS, Jacobsen OS, Juhler RK & Aamand J (2005) Elucidating the key member of a linuron-mineralizing bacterial community by PCR and reverse transcription-PCR denaturing gradient gel electrophoresis 16S rRNA gene fingerprinting and cultivation. Appl Environ Microb 71: 4144-4148.
33. Struthers JK, Jayachandran K & Moorman TB (1998) Biodegradation of atrazine by Agrobacterium radiobacter J14a and use of this strain in bioremediation of contaminated soil. Appl Environ Microb 64: 3368-3375.
34. Topp E (2001) A comparison of three atrazine-degrading bacteria for soil bioremediation. Biol Fert Soils 33: 529-534.
35. Torstensson L & del Pilar Castillo M (1997) Use of biobeds in Sweden to minimize environmental spillages from agricultural spraying equipment. Pesticide Outlook 8: 24-27.
36. Uyttebroek M, Breugelmans P, Janssen M et al. (2006) Distribution of the Mycobacterium community and polycyclic aromatic hydrocarbons (PAHs) among different size fractions of a long-term PAH-contaminated soil. Environ Microbiol 8: 836-847.
37. Vischetti C, Capri E, Trevisan M, Casucci C & Perucci P (2004) Biomassbed: a biological system to reduce pesticide point contamination at farm level. Chemosphere 55: 823-828.
38. Zhao SH, Arthur EL & Coats JR (2003) Influence of microbial inoculation (Pseudomonas sp strain ADP), the enzyme atrazine chlorohydrolase, and vegetation on the degradation of atrazine and metolachlor in soil. J Agr Food Chem 51: 3043-3048.