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Volumn 12, Issue , 2011, Pages

A comparison and user-based evaluation of models of textual information structure in the context of cancer risk assessment

Author keywords

[No Author keywords available]

Indexed keywords

AUTOMATIC CLASSIFICATION; AUTOMATIC CLASSIFIERS; AUTOMATIC IDENTIFICATION; AUTOMATIC SUMMARIZATION; BIOMEDICAL TEXT MININGS; CANCER RISK ASSESSMENTS; INFORMATION STRUCTURES; USER-BASED EVALUATIONS;

EID: 79952338946     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-12-69     Document Type: Article
Times cited : (14)

References (43)
  • 1
    • 84888283551 scopus 로고    scopus 로고
    • PubMed
    • PubMed. , http://www.ncbi.nlm.nih.gov/pubmed
  • 2
    • 17244380380 scopus 로고    scopus 로고
    • A survey of current work in biomedical text mining
    • 10.1093/bib/6.1.57, 15826357
    • Cohen A, Hersh W. A survey of current work in biomedical text mining. Briefings in Bioinformatics 2005, 6:57-71. 10.1093/bib/6.1.57, 15826357.
    • (2005) Briefings in Bioinformatics , vol.6 , pp. 57-71
    • Cohen, A.1    Hersh, W.2
  • 4
    • 33344465511 scopus 로고    scopus 로고
    • Biomedical Language Processing: What's Beyond PubMed?
    • 10.1016/j.molcel.2006.02.012, 1702322, 16507357
    • Hunter L, Cohen KB. Biomedical Language Processing: What's Beyond PubMed?. Mol Cell 2006, 21(5):589-594. 10.1016/j.molcel.2006.02.012, 1702322, 16507357.
    • (2006) Mol Cell , vol.21 , Issue.5 , pp. 589-594
    • Hunter, L.1    Cohen, K.B.2
  • 5
    • 33751111173 scopus 로고    scopus 로고
    • Text mining and its potential applications in systems biology
    • 10.1016/j.tibtech.2006.10.002, 17045684
    • Ananiadou S, Kell D, Tsujii J. Text mining and its potential applications in systems biology. Trends in Biotechnology 2006, 24(12):571-579. 10.1016/j.tibtech.2006.10.002, 17045684.
    • (2006) Trends in Biotechnology , vol.24 , Issue.12 , pp. 571-579
    • Ananiadou, S.1    Kell, D.2    Tsujii, J.3
  • 6
    • 70349445262 scopus 로고    scopus 로고
    • Current issues in biomedical text mining and natural language processing
    • Chapman W, Cohen KB. Current issues in biomedical text mining and natural language processing. Journal of Biomedical Informatics 2009, 5(42):757-759.
    • (2009) Journal of Biomedical Informatics , vol.5 , Issue.42 , pp. 757-759
    • Chapman, W.1    Cohen, K.B.2
  • 7
    • 36348990139 scopus 로고    scopus 로고
    • Frontiers of biomedical text mining: current progress
    • 10.1093/bib/bbm045, 2516302, 17977867
    • Zweigenbaum P, Demner-Fushman D, Yu H, Cohen KB. Frontiers of biomedical text mining: current progress. Brief Bioinform 2007, 8(5):358-375. 10.1093/bib/bbm045, 2516302, 17977867.
    • (2007) Brief Bioinform , vol.8 , Issue.5 , pp. 358-375
    • Zweigenbaum, P.1    Demner-Fushman, D.2    Yu, H.3    Cohen, K.B.4
  • 9
    • 33750517043 scopus 로고    scopus 로고
    • LitMiner: integration of library services within a bio-informatics application
    • 10.1186/1742-5581-3-11, 1626482, 17052341
    • Demaine J, Martin J, Wei L, de Bruijn B. LitMiner: integration of library services within a bio-informatics application. Biomedical Digital Libraries 2006, 3:11. 10.1186/1742-5581-3-11, 1626482, 17052341.
    • (2006) Biomedical Digital Libraries , vol.3 , pp. 11
    • Demaine, J.1    Martin, J.2    Wei, L.3    de Bruijn, B.4
  • 10
    • 84908088795 scopus 로고    scopus 로고
    • Integrating text mining into the MGI biocuration workflow
    • 10.1093/database/bap019, 2797454, 20157492
    • Dowell KG, McAndrews-Hill MS, Hill D, Drabkin H, Blake J. Integrating text mining into the MGI biocuration workflow. Database 2009, 2009:bap019. 10.1093/database/bap019, 2797454, 20157492.
    • (2009) Database , vol.2009
    • Dowell, K.G.1    McAndrews-Hill, M.S.2    Hill, D.3    Drabkin, H.4    Blake, J.5
  • 11
    • 31144458029 scopus 로고    scopus 로고
    • Extraction of transcript diversity from scientific literature
    • 10.1371/journal.pcbi.0010010, 1183516, 16103899
    • Shah P, Jensen L, Boue S, Bork P. Extraction of transcript diversity from scientific literature. PLoS Comput Biol 2005, 1:e10. 10.1371/journal.pcbi.0010010, 1183516, 16103899.
    • (2005) PLoS Comput Biol , vol.1
    • Shah, P.1    Jensen, L.2    Boue, S.3    Bork, P.4
  • 12
    • 1542400018 scopus 로고    scopus 로고
    • Automated extraction of mutation data from the literature: application of MuteXt to G protein-coupled receptors and nuclear hormone receptors
    • 10.1093/bioinformatics/btg449, 14990452
    • Horn F, Lau AL, Cohen FE. Automated extraction of mutation data from the literature: application of MuteXt to G protein-coupled receptors and nuclear hormone receptors. Bioinformatics 2004, 20(4):557-568. 10.1093/bioinformatics/btg449, 14990452.
    • (2004) Bioinformatics , vol.20 , Issue.4 , pp. 557-568
    • Horn, F.1    Lau, A.L.2    Cohen, F.E.3
  • 14
    • 14044254746 scopus 로고    scopus 로고
    • Textpresso: An Ontology-Based Information Retrieval and Extraction System for Biological Literature
    • 517822, 15383839
    • Müller HM, Kenny EE, Sternberg PW. Textpresso: An Ontology-Based Information Retrieval and Extraction System for Biological Literature. PLoS Biol 2004, 2(11):e309. 517822, 15383839.
    • (2004) PLoS Biol , vol.2 , Issue.11
    • Müller, H.M.1    Kenny, E.E.2    Sternberg, P.W.3
  • 16
    • 0040078056 scopus 로고    scopus 로고
    • Summarizing scientific articles: Experiments with relevance and rhetorical status
    • Teufel S, Moens M. Summarizing scientific articles: Experiments with relevance and rhetorical status. Computational Linguistics 2002, 28:409-445.
    • (2002) Computational Linguistics , vol.28 , pp. 409-445
    • Teufel, S.1    Moens, M.2
  • 17
    • 33646151379 scopus 로고    scopus 로고
    • Using argumentation to retrieve articles with similar citations
    • 10.1016/j.ijmedinf.2005.06.007, 16165395
    • Tbahriti I, Chichester C, Lisacek F, Ruch P. Using argumentation to retrieve articles with similar citations. Int J Med Inform 2006, 75(6):488-495. 10.1016/j.ijmedinf.2005.06.007, 16165395.
    • (2006) Int J Med Inform , vol.75 , Issue.6 , pp. 488-495
    • Tbahriti, I.1    Chichester, C.2    Lisacek, F.3    Ruch, P.4
  • 20
  • 22
    • 80053410932 scopus 로고    scopus 로고
    • Towards Domain-Independent Argumentative Zoning: Evidence from Chemistry and Computational Linguistics
    • Teufel S, Siddharthan A, Batchelor C. Towards Domain-Independent Argumentative Zoning: Evidence from Chemistry and Computational Linguistics. Proceedings of EMNLP 2009, 1493-1502.
    • (2009) Proceedings of EMNLP , pp. 1493-1502
    • Teufel, S.1    Siddharthan, A.2    Batchelor, C.3
  • 23
    • 51749123368 scopus 로고    scopus 로고
    • Multi-dimensional classification of biomedical text: Toward automated, practical provision of high-utility text to diverse users
    • 10.1093/bioinformatics/btn381, 2530883, 18718948
    • Shatkay H, Pan F, Rzhetsky A, Wilbur WJ. Multi-dimensional classification of biomedical text: Toward automated, practical provision of high-utility text to diverse users. Bioinformatics 2008, 24(18):2086-2093. 10.1093/bioinformatics/btn381, 2530883, 18718948.
    • (2008) Bioinformatics , vol.24 , Issue.18 , pp. 2086-2093
    • Shatkay, H.1    Pan, F.2    Rzhetsky, A.3    Wilbur, W.J.4
  • 24
    • 70449109756 scopus 로고    scopus 로고
    • Using conditional random fields for result identification in biomedical abstracts
    • Lin RTK, Dai HJ, Bow YY, Chiu JLT, Tsai RTH. Using conditional random fields for result identification in biomedical abstracts. Integr Comput-Aided Eng 2009, 16(4):339-352.
    • (2009) Integr Comput-Aided Eng , vol.16 , Issue.4 , pp. 339-352
    • Lin, R.T.K.1    Dai, H.J.2    Bow, Y.Y.3    Chiu, J.L.T.4    Tsai, R.T.H.5
  • 26
    • 60749127748 scopus 로고    scopus 로고
    • A baseline feature set for learning rhetorical zones using full articles in the biomedical domain
    • Mullen T, Mizuta Y, Collier N. A baseline feature set for learning rhetorical zones using full articles in the biomedical domain. Natural language processing and text mining 2005, 7:52-58.
    • (2005) Natural language processing and text mining , vol.7 , pp. 52-58
    • Mullen, T.1    Mizuta, Y.2    Collier, N.3
  • 27
    • 0343984156 scopus 로고    scopus 로고
    • Medical Literature Analysis and Retrieval System Online
    • Medical Literature Analysis and Retrieval System Online. , http://www.nlm.nih.gov/databases/databases_medline.html
  • 28
    • 30344443429 scopus 로고    scopus 로고
    • U.S. Environmental Protection Agency(EPA)
    • U.S. Environmental Protection Agency(EPA) Guidelines for carcinogen risk assessment 2005, U.S. Environmental Protection Agency(EPA)., http://www.epa.gov/cancerguidelines/
    • (2005) Guidelines for carcinogen risk assessment
  • 29
    • 70449366673 scopus 로고    scopus 로고
    • The First Step in the Development of Text Mining Technology for Cancer Risk Assessment: Identifying and Organizing Scientific Evidence in Risk Assessment Literature
    • 10.1186/1471-2105-10-303, 2759963, 19772619
    • Korhonen A, Sun L, Silins I, Stenius U. The First Step in the Development of Text Mining Technology for Cancer Risk Assessment: Identifying and Organizing Scientific Evidence in Risk Assessment Literature. BMC Bioinformatics 2009, 10:303. 10.1186/1471-2105-10-303, 2759963, 19772619.
    • (2009) BMC Bioinformatics , vol.10 , pp. 303
    • Korhonen, A.1    Sun, L.2    Silins, I.3    Stenius, U.4
  • 30
    • 63449142390 scopus 로고    scopus 로고
    • Is Searching Full Text More Effective Than Searching Abstracts?
    • 10.1186/1471-2105-10-46, 2695361, 19192280
    • Lin J. Is Searching Full Text More Effective Than Searching Abstracts?. BMC Bioinformatics 2009, 10:46. 10.1186/1471-2105-10-46, 2695361, 19192280.
    • (2009) BMC Bioinformatics , vol.10 , pp. 46
    • Lin, J.1
  • 31
    • 85063155473 scopus 로고    scopus 로고
    • Semantic Annotation of Papers: Interface & Enrichment Tool (SAPIENT)
    • Boulder, Colorado
    • Liakata M, Q C, Soldatova L. Semantic Annotation of Papers: Interface & Enrichment Tool (SAPIENT). Proceedings of BioNLP-09 2009, 193-200. Boulder, Colorado.
    • (2009) Proceedings of BioNLP-09 , pp. 193-200
    • Liakata, M.1    Q, C.2    Soldatova, L.3
  • 38
    • 84888277661 scopus 로고    scopus 로고
    • Data mining: practical machine learning tools and techniques with Java Implementations
    • Data mining: practical machine learning tools and techniques with Java Implementations. , http://www.cs.waikato.ac.nz/ml/weka/
  • 39
    • 84874468006 scopus 로고    scopus 로고
    • CRF++: Yet Another CRF toolkit
    • CRF++: Yet Another CRF toolkit. , http://crfpp.sourceforge.net/
  • 41
    • 0001884644 scopus 로고
    • Individual comparisons by ranking methods
    • Wilcoxon F. Individual comparisons by ranking methods. Biometrics Bulletin 1945, 1(6):80-83.
    • (1945) Biometrics Bulletin , vol.1 , Issue.6 , pp. 80-83
    • Wilcoxon, F.1
  • 42
    • 0002322469 scopus 로고
    • On a test of whether one of two random variables is stochastically larger than the other
    • Mann HB, Whitney DR. On a test of whether one of two random variables is stochastically larger than the other. Annals of Mathematical Statistics 1947, 18:50-60.
    • (1947) Annals of Mathematical Statistics , vol.18 , pp. 50-60
    • Mann, H.B.1    Whitney, D.R.2
  • 43
    • 0017360990 scopus 로고
    • The measurement of observer agreement for categorical data
    • 10.2307/2529310, 843571
    • Landis JR, Koch GG. The measurement of observer agreement for categorical data. Biometrics 1977, 33:159-174. 10.2307/2529310, 843571.
    • (1977) Biometrics , vol.33 , pp. 159-174
    • Landis, J.R.1    Koch, G.G.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.