메뉴 건너뛰기




Volumn 39, Issue 4, 2011, Pages 1439-1448

Co-transcriptional RNA cleavage provides a failsafe termination mechanism for yeast RNA polymerase i

Author keywords

[No Author keywords available]

Indexed keywords

DNA DIRECTED RNA POLYMERASE; ENDONUCLEASE; EXONUCLEASE; PROTEIN RAT1; PROTEIN REB1; PROTEIN RNT1; UNCLASSIFIED DRUG;

EID: 79952337393     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkq894     Document Type: Article
Times cited : (18)

References (27)
  • 1
    • 0028080886 scopus 로고
    • A model for transcription termination by RNA polymerase I
    • DOI 10.1016/0092-8674(94)90261-5
    • Lang, W.H., Morrow, B.E., Ju, Q., Warner, J.R. and Reeder, R.H. (1994) A model for transcription termination by RNA polymerase I. Cell, 79, 527-534. (Pubitemid 24346067)
    • (1994) Cell , vol.79 , Issue.3 , pp. 527-534
    • Lang, W.H.1    Morrow, B.E.2    Ju, Q.3    Warner, J.R.4    Reeder, R.H.5
  • 2
    • 0023053576 scopus 로고
    • A repeated 18 bp sequence motif in the mouse rDNA spacer mediates binding of a nuclear factor and transcription termination
    • Grummt, I., Rosenbauer, H., Niedermeyer, I., Maier, U. and Ohrlein, A. (1986) A repeated 18 bp sequence motif in the mouse rDNA spacer mediates binding of a nuclear factor and transcription termination. Cell, 45, 837-846.
    • (1986) Cell , vol.45 , pp. 837-846
    • Grummt, I.1    Rosenbauer, H.2    Niedermeyer, I.3    Maier, U.4    Ohrlein, A.5
  • 3
    • 0027523912 scopus 로고
    • The REB1 site is an essential component of a terminator for RNA polymerase I in Saccharomyces cerevisiae
    • Lang, W.H. and Reeder, R.H. (1993) The REB1 site is an essential component of a terminator for RNA polymerase I in Saccharomyces cerevisiae. Mol. Cell Biol., 13, 649-658. (Pubitemid 23006941)
    • (1993) Molecular and Cellular Biology , vol.13 , Issue.1 , pp. 649-658
    • Lang, W.H.1    Reeder, R.H.2
  • 4
    • 0032740975 scopus 로고    scopus 로고
    • Saccharomyces cerevisiae RNA polymerase I terminates transcription at the Reb1 terminator in vivo
    • Reeder, R.H., Guevara, P. and Roan, J.G. (1999) Saccharomyces cerevisiae RNA polymerase I terminates transcription at the Reb1 terminator in vivo. Mol. Cell Biol., 19, 7369-7376. (Pubitemid 29493400)
    • (1999) Molecular and Cellular Biology , vol.19 , Issue.11 , pp. 7369-7376
    • Reeder, R.H.1    Guevara, P.2    Roan, J.G.3
  • 5
    • 0032696407 scopus 로고    scopus 로고
    • Mechanism of transcription termination: PTRF interacts with the largest subunit of RNA polymerase I and dissociates paused transcription complexes from yeast and mouse
    • DOI 10.1007/s004380051112
    • Jansa, P. and Grummt, I. (1999) Mechanism of transcription termination: PTRF interacts with the largest subunit of RNA polymerase I and dissociates paused transcription complexes from yeast and mouse. Mol. Gen. Genet., 262, 508-514. (Pubitemid 29535293)
    • (1999) Molecular and General Genetics , vol.262 , Issue.3 , pp. 508-514
    • Jansa, P.1    Grummt, I.2
  • 7
    • 42149123284 scopus 로고    scopus 로고
    • Efficient termination of transcription by RNA polymerase I requires the 5 exonuclease Rat1 in yeast
    • DOI 10.1101/gad.463708
    • 0 exonuclease Rat1 in yeast. Genes Dev., 22, 1069-1081. (Pubitemid 351544244)
    • (2008) Genes and Development , vol.22 , Issue.8 , pp. 1069-1081
    • El Hage, A.1    Koper, M.2    Kufel, J.3    Tollervey, D.4
  • 8
    • 42149154858 scopus 로고    scopus 로고
    • Budding yeast RNA polymerases I and II employ parallel mechanisms of transcriptional termination
    • DOI 10.1101/gad.463408
    • Kawauchi, J., Mischo, H., Braglia, P., Rondon, A. and Proudfoot, N.J. (2008) Budding yeast RNA polymerases I and II employ parallel mechanisms of transcriptional termination. Genes Dev., 22, 1082-1092. (Pubitemid 351544245)
    • (2008) Genes and Development , vol.22 , Issue.8 , pp. 1082-1092
    • Kawauchi, J.1    Mischo, H.2    Braglia, P.3    Rondon, A.4    Proudfoot, N.J.5
  • 9
    • 0033031442 scopus 로고    scopus 로고
    • Yeast Rnt1p is required for cleavage of the pre-ribosomal RNA in the 3' ETS but not the 5' ETS
    • DOI 10.1017/S135583829999026X
    • 0 ETS. RNA, 5, 909-917. (Pubitemid 29321070)
    • (1999) RNA , vol.5 , Issue.7 , pp. 909-917
    • Kufel, J.1    Dichtl, B.2    Tollervey, D.3
  • 10
    • 0032562647 scopus 로고    scopus 로고
    • The role of the 3' external transcribed spacer in yeast Pre-rRNA processing
    • DOI 10.1006/jmbi.1998.1693
    • 0 external transcribed spacer in yeast pre-rRNA processing. J. Mol. Biol., 278, 67-78. (Pubitemid 28196151)
    • (1998) Journal of Molecular Biology , vol.278 , Issue.1 , pp. 67-78
    • Allmang, C.1    Tollervey, D.2
  • 11
    • 4644237188 scopus 로고    scopus 로고
    • A cotranscriptional model for 3-end processing of the Saccharomyces cerevisiae pre-ribosomal RNA precursor
    • DOI 10.1261/rna.7750804
    • 0 -end processing of the Saccharomyces cerevisiae pre-ribosomal RNA precursor. RNA, 10, 1572-1585. (Pubitemid 39288192)
    • (2004) RNA , vol.10 , Issue.10 , pp. 1572-1585
    • Henras, A.K.1    Bertrand, E.2    Chanfreau, G.3
  • 12
    • 0028863631 scopus 로고
    • Poly(A) site selection in the HIV-1 provirus: Inhibition of promoter-proximal polyadenylation by the downstream major splice donor site
    • Ashe, M.P., Griffin, P., James, W. and Proudfoot, N.J. (1995) Poly(A) site selection in the HIV-1 provirus: inhibition of promoter-proximal polyadenylation by the downstream major splice donor site. Genes Dev., 9, 3008-3025.
    • (1995) Genes Dev. , vol.9 , pp. 3008-3025
    • Ashe, M.P.1    Griffin, P.2    James, W.3    Proudfoot, N.J.4
  • 13
    • 0033105008 scopus 로고    scopus 로고
    • Terminal exon definition occurs cotranscriptionally and promotes termination of RNA polymerase II
    • DOI 10.1016/S1097-2765(00)80464-5
    • Dye, M.J. and Proudfoot, N.J. (1999) Terminal exon definition occurs cotranscriptionally and promotes termination of RNA polymerase II. Mol. Cell, 3, 371-378. (Pubitemid 29290677)
    • (1999) Molecular Cell , vol.3 , Issue.3 , pp. 371-378
    • Dye, M.J.1    Proudfoot, N.J.2
  • 14
    • 31544440417 scopus 로고    scopus 로고
    • Adenylation and exosome-mediated degradation of cotranscriptionally cleaved pre-messenger RNA in human cells
    • DOI 10.1016/j.molcel.2005.12.008, PII S1097276505018502
    • West, S., Gromak, N., Norbury, C.J. and Proudfoot, N.J. (2006) Adenylation and exosome-mediated degradation of cotranscriptionally cleaved pre-messenger RNA in human cells. Mol. Cell, 21, 437-443. (Pubitemid 43163538)
    • (2006) Molecular Cell , vol.21 , Issue.3 , pp. 437-443
    • West, S.1    Gromak, N.2    Norbury, C.J.3    Proudfoot, N.J.4
  • 15
    • 0029919935 scopus 로고    scopus 로고
    • RNase III cleaves eukaryotic preribosomal RNA at a U3 snoRNP-dependent site
    • DOI 10.1016/S0092-8674(00)81087-9
    • Elela, S.A., Igel, H. and Ares, M. Jr. (1996) RNase III cleaves eukaryotic preribosomal RNA at a U3 snoRNP-dependent site. Cell, 85, 115-124. (Pubitemid 26116812)
    • (1996) Cell , vol.85 , Issue.1 , pp. 115-124
    • Elela, S.A.1    Igel, H.2    Ares Jr., M.3
  • 16
    • 0033105059 scopus 로고    scopus 로고
    • The exosome subunit Rrp43p is required for the efficient maturation of 5.8S, 18S and 25S rRNA
    • DOI 10.1093/nar/27.5.1283
    • Zanchin, N.I. and Goldfarb, D.S. (1999) The exosome subunit Rrp43p is required for the efficient maturation of 5.8S, 18S and 25S rRNA. Nucleic Acids Res., 27, 1283-1288. (Pubitemid 29206436)
    • (1999) Nucleic Acids Research , vol.27 , Issue.5 , pp. 1283-1288
    • Zanchin, N.I.T.1    Goldfarb, D.S.2
  • 17
    • 9644308046 scopus 로고    scopus 로고
    • Human 5 3 exonuclease Xm2 promotes transcription termination at co-transcriptional cleavage sites
    • DOI 10.1038/nature03035
    • 0 exonuclease Xrn2 promotes transcription termination at co-transcriptional cleavage sites. Nature, 432, 522-525. (Pubitemid 39576535)
    • (2004) Nature , vol.432 , Issue.7016 , pp. 522-525
    • West, S.1    Gromak, N.2    Proudfoot, N.J.3
  • 18
    • 0037370054 scopus 로고    scopus 로고
    • In exponentially growing Saccharomyces cerevisiae cells, rRNA synthesis is determined by the summed RNA polymerase I loading rate rather than by the number of active genes
    • DOI 10.1128/MCB.23.5.1558-1568.2003
    • French, S.L., Osheim, Y.N., Cioci, F., Nomura, M. and Beyer, A.L. (2003) In exponentially growing Saccharomyces cerevisiae cells, rRNA synthesis is determined by the summed RNA polymerase I loading rate rather than by the number of active genes. Mol. Cell Biol., 23, 1558-1568. (Pubitemid 36246038)
    • (2003) Molecular and Cellular Biology , vol.23 , Issue.5 , pp. 1558-1568
    • French, S.L.1    Osheim, Y.N.2    Cioci, F.3    Nomura, M.4    Beyer, A.L.5
  • 19
    • 0034934715 scopus 로고    scopus 로고
    • Yeast RNA polymerase I enhancer is dispensable for transcription of the chromosomal rRNA gene and cell growth, and its apparent transcription enhancement from ectopic promoters requires Fob1 protein
    • DOI 10.1128/MCB.21.16.5541-5553.2001
    • Wai, H., Johzuka, K., Vu, L., Eliason, K., Kobayashi, T., Horiuchi, T. and Nomura, M. (2001) Yeast RNA polymerase I enhancer is dispensable for transcription of the chromosomal rRNA gene and cell growth, and its apparent transcription enhancement from ectopic promoters requires Fob1 protein. Mol. Cell Biol., 21, 5541-5553. (Pubitemid 32702458)
    • (2001) Molecular and Cellular Biology , vol.21 , Issue.16 , pp. 5541-5553
    • Wai, H.1    Johzuka, K.2    Vu, L.3    Eliason, K.4    Kobayashi, T.5    Horiuchi, T.6    Nomura, M.7
  • 22
    • 0027510020 scopus 로고
    • A bipartite DNA-binding domain in yeast Reb1p
    • Morrow, B.E., Ju, Q. and Warner, J.R. (1993) A bipartite DNA-binding domain in yeast Reb1p. Mol. Cell Biol., 13, 1173-1182. (Pubitemid 23040284)
    • (1993) Molecular and Cellular Biology , vol.13 , Issue.2 , pp. 1173-1182
    • Morrow, B.E.1    Ju, Q.2    Warner, J.R.3
  • 23
    • 0028865507 scopus 로고
    • The release element of the yeast polymerase i transcription terminator can function independently of Reb1p
    • Jeong, S.W., Lang, W.H. and Reeder, R.H. (1995) The release element of the yeast polymerase I transcription terminator can function independently of Reb1p. Mol. Cell Biol., 15, 5929-5936.
    • (1995) Mol. Cell Biol. , vol.15 , pp. 5929-5936
    • Jeong, S.W.1    Lang, W.H.2    Reeder, R.H.3
  • 25
    • 57749189164 scopus 로고    scopus 로고
    • Endonucleolytic RNA cleavage by a eukaryotic exosome
    • Lebreton, A., Tomecki, R., Dziembowski, A. and Seraphin, B. (2008) Endonucleolytic RNA cleavage by a eukaryotic exosome. Nature, 456, 993-996.
    • (2008) Nature , vol.456 , pp. 993-996
    • Lebreton, A.1    Tomecki, R.2    Dziembowski, A.3    Seraphin, B.4
  • 26
    • 49449101414 scopus 로고    scopus 로고
    • Terminating transcription in yeast: Whether to be a 'nerd' or a 'rat'
    • Rondon, A.G., Mischo, H.E. and Proudfoot, N.J. (2008) Terminating transcription in yeast: whether to be a 'nerd' or a 'rat'. Nat. Struct. Mol. Biol., 15, 775-776.
    • (2008) Nat. Struct. Mol. Biol. , vol.15 , pp. 775-776
    • Rondon, A.G.1    Mischo, H.E.2    Proudfoot, N.J.3
  • 27
    • 9644310314 scopus 로고    scopus 로고
    • The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II
    • DOI 10.1038/nature03041
    • Kim, M., Krogan, N.J., Vasiljeva, L., Rando, O.J., Nedea, E., Greenblatt, J.F. and Buratowski, S. (2004) The yeast Rat1 exonuclease promotes transcription termination by RNA polymerase II. Nature, 432, 517-522. (Pubitemid 39576534)
    • (2004) Nature , vol.432 , Issue.7016 , pp. 517-522
    • Kim, M.1    Krogan, N.J.2    Vasiljeva, L.3    Rando, O.J.4    Nedea, E.5    Greenblatt, J.F.6    Buratowski, S.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.