Development of backcross recombinant inbred lines between Oryza sativa Nipponbare and O. rufipogon and QTL detection on drought tolerance

Breeding Science

Volumn 61, Issue 1, 2011, Pages 76-79

  Thanh, Pham Thien ^a   Phan, Phuong Dang Thai ^a   Mori, Naoki ^a   Ishikawa, Ryo ^a   Ishii, Takashige ^a  

^a KOBE UNIVERSITY   (Japan)

Author keywords

Backcross recombinant inbred lines; Drought tolerance; Oryza rufipogon; QTL analysis; Rice

Indexed keywords

ORYZA RUFIPOGON; ORYZA SATIVA;

EID: 79952221467     PISSN: 13447610     EISSN: 13473735     Source Type: Journal    
DOI: 10.1270/jsbbs.61.76     Document Type: Note

References (16)

1. Brar, D.S. and G.S. Khush (1997) Alien introgression in rice. Plant Mol. Biol. 35: 35-47.
2. Cai, H.W. and H. Morishima (2002) QTL clusters reflect character associations in wild and cultivated rice. Theor. Appl. Genet. 104: 1217-1228.
3. Dellaporta, S.L., H. Wood and J.B. Hicks (1983) A plant DNA minipreparation. Plant Mol. Biol. Rep. 1: 19-21.
4. INGER (1996) Standard evaluation system for rice. International Rice Research Institute, Manila, p.52.
5. Liang, C., P. Jaiswal, C. Hebbard, S. Avraham, E.S. Buckler, T. Casstevens, B. Hurwitz, S. McCouch, J. Ni, A. Pujar et al. (2008) Gramene: a growing plant comparative genomics resource. Nucleic Acids Res. 36: 947-953.
6. Morishima, H., K. Hinata and H.I. Oka (1963) Comparison of modes of evolution of cultivated forms from two wild rice species, Oryza breviligulata and O. perennis. Evolution 17: 170-181.
7. Oka, H.I. and W.T. Chang (1961) Hybrid swarms between wild and cultivated species, Oryza perennis and O. sativa. Evolution 15: 418-430.
8. Onishi, K., Y. Horiuchi, N. Ishigoh-Oka, K. Takagi, N. Ichikawa, M. Maruoka and Y. Sano (2007) A QTL cluster for plant architecture and its ecological significance in Asian wild rice. Breed. Sci. 57: 7-16.
9. Panaud, O., X. Chen and S.R. McCouch (1996) Development of microsatellite markers and characterization of simple sequence length polymorphism (SSLP) in rice (Oryza sativa L.). Mol. Gen. Genet. 252: 597-607.
10. Price, A.H., J. Townend, M.P. Jones, A. Audebert and B. Courtois (2002) Mapping QTLs associated with drought avoidance in upland rice grown in the Philippines and West Africa. Plant Mol. Biol. 48: 683-695.
11. Tanksley, S.D. and J.C. Nelson (1996) Advanced backcross QTL analysis: a method for the simultaneous discovery and transfer of valuable QTLs from unadapted germplasm into elite breeding lines. Theor. Appl. Genet. 92: 191-203.
12. Tanksley, S.D., S. Grandillo, T.M. Fulton, D. Zamir, Y. Eshed, V. Petiard, J. Lopez and T. Beck-Bunn (1996) Advanced backcross QTL analysis in a cross between an elite processing line of tomato and its wild relative L. pimpinellifolium. Theor. Appl. Genet. 92: 213-224.
13. Vaughan, D.A. (1994) The wild relatives of rice. International Rice Research Institute, Manila, Philippines, p. 137.
14. Wang, S., C.J. Basten, P. Gaffney and Z.B. Zeng (2007) Windows QTL Cartographer 2.5. Bioinformatics Research Center, North Carolina State University, USA.
15. Xiao, J., J. Li, S. Grandillo, S.N. Ahn, L. Yuan, S.D. Tanksley and S.R.McCouch (1998) Identification of trait-improving quantitative trait loci alleles from a wild rice relative, Oryza rufipogon. Genetics 150: 899-909.
16. Yue, B., L. Xiong, W. Xue, Y. Xing, L. Luo and C. Xu (2005) Genetic analysis for drought resistance of rice at reproductive stage in field with different types of soil. Theor. Appl. Genet. 111: 1127-1136.