메뉴 건너뛰기




Volumn 696, Issue , 2011, Pages 341-352

Evaluation of Peak-Picking Algorithms for Protein Mass Spectrometry

Author keywords

Baseline Correction; Continuous Wavelet Transform; Median Absolute Deviation; Peak Detection; Peak Picking

Indexed keywords

CONTINUOUS WAVELET TRANSFORM; MASS SPECTROMETRY; RECEIVER OPERATING CHARACTERISTIC; SENSITIVITY AND SPECIFICITY; SIGNAL NOISE RATIO; ALGORITHM; ANIMAL; ARTICLE; CHEMISTRY; METHODOLOGY; MOUSE; PROTEIN DATABASE; STANDARD; WAVELET ANALYSIS;

EID: 79952198198     PISSN: 10643745     EISSN: 19406029     Source Type: Book Series    
DOI: 10.1007/978-1-60761-987-1_22     Document Type: Chapter
Times cited : (20)

References (14)
  • 1
    • 49749120982 scopus 로고    scopus 로고
    • A novel wavelet-based thresholding method for the pre-processing of mass spectrometr y data that accounts for heterogeneous noise
    • Kwon D, Vannucci M, Song JJ, Jeong J, Pfeiffer RM (2008) A novel wavelet-based thresholding method for the pre-processing of mass spectrometr y data that accounts for heterogeneous noise. Proteomics 8: 3019–3029
    • (2008) Proteomics , vol.8 , pp. 3019-3029
    • Kwon, D.1    Vannucci, M.2    Song, J.J.3    Jeong, J.4    Pfeiffer, R.M.5
  • 2
    • 0042553279 scopus 로고
    • Smoothing and differentiation of data by simplified least squares procedures
    • Savitzky A, Golay MJE (1964) Smoothing and differentiation of data by simplified least squares procedures. Anal Chem 36(8):1627–1639
    • (1964) Anal Chem , vol.36 , Issue.8 , pp. 1627-1639
    • Savitzky, A.1    Golay, M.J.E.2
  • 3
    • 18744411077 scopus 로고    scopus 로고
    • Improved peak detection and quantification of mass spectrometry data acquired from surface-enhanced laser desorption and ionization by denoising spectra with the undecimated discrete wavelet transform
    • Coombes KR, Tsavachidis S, Morris JS, Baggerly KA, Hung MC, Kuerer HM (2005) Improved peak detection and quantification of mass spectrometry data acquired from surface-enhanced laser desorption and ionization by denoising spectra with the undecimated discrete wavelet transform. Proteomics 5:4107–4117
    • (2005) Proteomics , vol.5 , pp. 4107-4117
    • Coombes, K.R.1    Tsavachidis, S.2    Morris, J.S.3    Baggerly, K.A.4    Hung, M.C.5    Kuerer, H.M.6
  • 5
    • 85053520810 scopus 로고
    • Local regression models
    • Chambers JM, Hastie T, Wadsworth & Brooks/Cole, Pacific Grove, CA
    • Cleveland WS, Grosse E, Shyu WM (1992) Local regression models. In: Chambers JM, Hastie T (eds) Statistical models in S. Wadsworth & Brooks/Cole, Pacific Grove, CA, pp 309–376
    • (1992) Statistical Models in S , pp. 309-376
    • Cleveland, W.S.1    Grosse, E.2    Shyu, W.M.3
  • 7
    • 33748659203 scopus 로고    scopus 로고
    • Improved peak detection in mass spectrum by incorporating continuous wavelet transform-based pattern matching
    • Du P, Kibbe WA, Lin SM (2006) Improved peak detection in mass spectrum by incorporating continuous wavelet transform-based pattern matching. Bioinformatics 22: 2059–2065
    • (2006) Bioinformatics , vol.22 , pp. 2059-2065
    • Du, P.1    Kibbe, W.A.2    Lin, S.M.3
  • 12
    • 60549117342 scopus 로고    scopus 로고
    • Comparison of public peak detection algorithms for MALDI mass spectrometry data analysis
    • Yang C, He Z, Yu W (2009) Comparison of public peak detection algorithms for MALDI mass spectrometry data analysis. BMC Bioinform 10:4
    • (2009) BMC Bioinform , vol.10
    • Yang, C.1    He, Z.2    Yu, W.3
  • 14
    • 25144448206 scopus 로고    scopus 로고
    • Algorithms for alignment of mass spectrometry proteomic data
    • Jeffries N (2005) Algorithms for alignment of mass spectrometry proteomic data. Bioinformatics 21:3066–3073
    • (2005) Bioinformatics , vol.21 , pp. 3066-3073
    • Jeffries, N.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.