-
1
-
-
1242351547
-
Analysis of regulatory networks in Pseudomonas aeruginosa by genomewide transcriptional profiling
-
Goodman, A. L., and Lory, S. (2004) Analysis of regulatory networks in Pseudomonas aeruginosa by genomewide transcriptional profiling, Curr. Opin. Microbiol. 7, 39–44.
-
(2004)
Curr. Opin. Microbiol
, vol.7
, pp. 39-44
-
-
Goodman, A.L.1
Lory, S.2
-
2
-
-
33644853806
-
A network of networks: Quorum-sensing gene regulation in Pseudomonas aeruginosa
-
Schuster, M., and Greenberg, E. P. (2006) A network of networks: quorum-sensing gene regulation in Pseudomonas aeruginosa, Int. J. Med. Microbiol. 296, 73–81.
-
(2006)
Int. J. Med. Microbiol.
, vol.296
, pp. 73-81
-
-
Schuster, M.1
Greenberg, E.P.2
-
3
-
-
34447564221
-
Look who’s talking: Communication and quorum sensing in the bacterial world
-
Williams, P., Winzer, K., Chan, W. C., and Camara, M. (2007) Look who’s talking: communication and quorum sensing in the bacterial world, Philos. Trans. R. Soc. London. 362, 1119–1134.
-
(2007)
Philos. Trans. R. Soc. London.
, vol.362
, pp. 1119-1134
-
-
Williams, P.1
Winzer, K.2
Chan, W.C.3
Camara, M.4
-
4
-
-
27944442272
-
Quorum sensing: Cell-to-cell communication in bacteria
-
Waters, C. M., and Bassler, B. L. (2005) Quorum sensing: cell-to-cell communication in bacteria, Annu. Rev. Cell Dev. Biol. 21, 319–346.
-
(2005)
Annu. Rev. Cell Dev. Biol.
, vol.21
, pp. 319-346
-
-
Waters, C.M.1
Bassler, B.L.2
-
5
-
-
33847145453
-
Does efficiency sensing unify diffusion and quorum sensing?
-
Hense, B. A., Kuttler, C., Muller, J., Rothballer, M., Hartmann, A., and Kreft, J. U. (2007) Does efficiency sensing unify diffusion and quorum sensing?, Nat. Rev. 5, 230–239.
-
(2007)
Nat. Rev.
, vol.5
, pp. 230-239
-
-
Hense, B.A.1
Kuttler, C.2
Muller, J.3
Rothballer, M.4
Hartmann, A.5
Kreft, J.U.6
-
6
-
-
0034739007
-
Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen
-
Stover, C. K., Pham, X. Q., Erwin, A. L., Mizoguchi, S. D., Warrener, P., Hickey, M. J., Brinkman, F. S., Hufnagle, W. O., Kowalik, D. J., Lagrou, M., Garber, R. L., Goltry, L., Tolentino, E., Westbrock-Wadman, S., Yuan, Y., Brody, L. L., Coulter, S. N., Folger, K. R., Kas, A., Larbig, K., Lim, R., Smith, K., Spencer, D., Wong, G. K., Wu, Z., and Paulsen, I. T. (2000) Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen, Nature. 406, 947–948.
-
(2000)
Nature
, vol.406
, pp. 947-948
-
-
Stover, C.K.1
Pham, X.Q.2
Erwin, A.L.3
Mizoguchi, S.D.4
Warrener, P.5
Hickey, M.J.6
Brinkman, F.S.7
Hufnagle, W.O.8
Kowalik, D.J.9
Lagrou, M.10
Garber, R.L.11
Goltry, L.12
Tolentino, E.13
Westbrock-Wadman, S.14
Yuan, Y.15
Brody, L.L.16
Coulter, S.N.17
Folger, K.R.18
Kas, A.19
Larbig, K.20
Lim, R.21
Smith, K.22
Spencer, D.23
Wong, G.K.24
Wu, Z.25
Paulsen, I.T.26
more..
-
7
-
-
0041989633
-
Attenuation of Pseudomonas aeruginosa virulence by quorum sensing inhibitors
-
Hentzer, M., Wu, H., Andersen, J. B., Riedel, K., Rasmussen, T. B., Bagge, N., Kumar, N., Schembri, M. A., Song, Z., Kristoffersen, P., Manefield, M., Costerton, J. W., Molin, S., Eberl, L., Steinberg, P., Kjelleberg, S., Hoiby, N., and Givskov, M. (2003) Attenuation of Pseudomonas aeruginosa virulence by quorum sensing inhibitors, EMBO J. 22, 3803–3815.
-
(2003)
EMBO J
, vol.22
, pp. 3803-3815
-
-
Hentzer, M.1
Wu, H.2
Andersen, J.B.3
Riedel, K.4
Rasmussen, T.B.5
Bagge, N.6
Kumar, N.7
Schembri, M.A.8
Song, Z.9
Kristoffersen, P.10
Manefield, M.11
Costerton, J.W.12
Molin, S.13
Eberl, L.14
Steinberg, P.15
Kjelleberg, S.16
Hoiby, N.17
Givskov, M.18
-
8
-
-
0037378570
-
Identification, timing and signal specificity of Pseudomonas aeruginosa quorum-controlled genes: A transcriptome analysis
-
Schuster, M., Lohstroh, C. P., Ogi, T., and Greenberg, E. P. (2003) Identification, timing and signal specificity of Pseudomonas aeruginosa quorum-controlled genes: a transcriptome analysis, J. Bacteriol. 185, 2066–2079.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 2066-2079
-
-
Schuster, M.1
Lohstroh, C.P.2
Ogi, T.3
Greenberg, E.P.4
-
9
-
-
0037377827
-
Microarray analysis of Pseudomonas aeruginosa quorum-sensing regulons: Effects of growth phase and environment
-
Wagner, V. E., Bushnell, D., Passador, L., Brooks, A. I., and Iglewski, B. H. (2003) Microarray analysis of Pseudomonas aeruginosa quorum-sensing regulons: effects of growth phase and environment, J. Bacteriol. 185, 2080–2095.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 2080-2095
-
-
Wagner, V.E.1
Bushnell, D.2
Passador, L.3
Brooks, A.I.4
Iglewski, B.H.5
-
10
-
-
1442349817
-
The Pseudomonas aeruginosa RpoS regulon and its relationship to quorum sensing
-
Schuster, M., Hawkins, A. C., Harwood, C. S., and Greenberg, E. P. (2004) The Pseudomonas aeruginosa RpoS regulon and its relationship to quorum sensing, Mol. Microbiol. 51, 973–985.
-
(2004)
Mol. Microbiol.
, vol.51
, pp. 973-985
-
-
Schuster, M.1
Hawkins, A.C.2
Harwood, C.S.3
Greenberg, E.P.4
-
11
-
-
1642543160
-
Pseudomonas aeruginosa biofilms exposed to imipenem exhibit changes in global gene expression and beta-lactamase and alginate production
-
Bagge, N., Schuster, M., Hentzer, M., Ciofu, O., Givskov, M., Greenberg, E. P., and Hoiby, N. (2004) Pseudomonas aeruginosa biofilms exposed to imipenem exhibit changes in global gene expression and beta-lactamase and alginate production, Antimicrob. Agents. Chemother. 48, 1175–1187.
-
(2004)
Antimicrob. Agents. Chemother.
, vol.48
, pp. 1175-1187
-
-
Bagge, N.1
Schuster, M.2
Hentzer, M.3
Ciofu, O.4
Givskov, M.5
Greenberg, E.P.6
Hoiby, N.7
-
12
-
-
33645065354
-
Hfq-dependent alterations of the transcriptome profile and effects on quorum sensing in Pseudomonas aeruginosa
-
Sonnleitner, E., Schuster, M., Sorger-Domenigg, T., Greenberg, E. P., and Blasi, U. (2006) Hfq-dependent alterations of the transcriptome profile and effects on quorum sensing in Pseudomonas aeruginosa, Mol. Microbiol. 59, 1542–1558.
-
(2006)
Mol. Microbiol.
, vol.59
, pp. 1542-1558
-
-
Sonnleitner, E.1
Schuster, M.2
Sorger-Domenigg, T.3
Greenberg, E.P.4
Blasi, U.5
-
13
-
-
36549079948
-
RsaL provides quorum sensing homeostasis and functions as a global regulator of gene expression in Pseudomonas aeruginosa
-
Rampioni, G., Schuster, M., Greenberg, E. P., Bertani, I., Grasso, M., Venturi, V., Zennaro, E., and Leoni, L. (2007) RsaL provides quorum sensing homeostasis and functions as a global regulator of gene expression in Pseudomonas aeruginosa, Mol. Microbiol. 66, 1557–1565.
-
(2007)
Mol. Microbiol.
, vol.66
, pp. 1557-1565
-
-
Rampioni, G.1
Schuster, M.2
Greenberg, E.P.3
Bertani, I.4
Grasso, M.5
Venturi, V.6
Zennaro, E.7
Leoni, L.8
-
14
-
-
22544455625
-
Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology
-
Palmer, K. L., Mashburn, L. M., Singh, P. K., and Whiteley, M. (2005) Cystic fibrosis sputum supports growth and cues key aspects of Pseudomonas aeruginosa physiology, J. Bacteriol. 187, 5267–5277.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 5267-5277
-
-
Palmer, K.L.1
Mashburn, L.M.2
Singh, P.K.3
Whiteley, M.4
-
15
-
-
23344453820
-
Iron and Pseudomonas aeruginosa biofilm formation
-
Banin, E., Vasil, M. L., and Greenberg, E. P. (2005) Iron and Pseudomonas aeruginosa biofilm formation, Proc. Natl. Acad. Sci. U.S.A. 102, 11076–11081.
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 11076-11081
-
-
Banin, E.1
Vasil, M.L.2
Greenberg, E.P.3
-
16
-
-
21144443272
-
Delays in Pseudomonas aeruginosa quorum-controlled gene expression are conditional
-
Yarwood, J. M., Volper, E. M., and Greenberg, E. P. (2005) Delays in Pseudomonas aeruginosa quorum-controlled gene expression are conditional, Proc. Natl. Acad. Sci. U.S.A. 102, 9008–9013.
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 9008-9013
-
-
Yarwood, J.M.1
Volper, E.M.2
Greenberg, E.P.3
-
17
-
-
52949096084
-
Next-generation DNA sequencing methods
-
Mardis, E. R. (2008) Next-generation DNA sequencing methods, Annu. Rev. Genomics Hum. Genet. 9, 387–402.
-
(2008)
Annu. Rev. Genomics Hum. Genet.
, vol.9
, pp. 387-402
-
-
Mardis, E.R.1
-
18
-
-
58249138817
-
Generations of sequencing technologies
-
Pettersson, E., Lundeberg, J., and Ahmadian, A. (2009) Generations of sequencing technologies, Genomics. 93, 105–111.
-
(2009)
Genomics
, vol.93
, pp. 105-111
-
-
Pettersson, E.1
Lundeberg, J.2
Ahmadian, A.3
-
19
-
-
0035687554
-
Assessing gene significance from cDNA microarray expression data via mixed models
-
Wolfinger, R. D., Gibson, G., Wolfinger, E. D., Bennett, L., Hamadeh, H., Bushel, P., Afshari, C., and Paules, R. S. (2001) Assessing gene significance from cDNA microarray expression data via mixed models, J. Comput. Biol. 8, 625–637.
-
(2001)
J. Comput. Biol.
, vol.8
, pp. 625-637
-
-
Wolfinger, R.D.1
Gibson, G.2
Wolfinger, E.D.3
Bennett, L.4
Hamadeh, H.5
Bushel, P.6
Afshari, C.7
Paules, R.S.8
-
20
-
-
15444364657
-
On the utility of pooling biological samples in microarray experiments
-
Kendziorski, C., Irizarry, R. A., Chen, K. S., Haag, J. D., and Gould, M. N. (2005) On the utility of pooling biological samples in microarray experiments, Proc. Natl. Acad. Sci. U.S.A. 102, 4252–4257.
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 4252-4257
-
-
Kendziorski, C.1
Irizarry, R.A.2
Chen, K.S.3
Haag, J.D.4
Gould, M.N.5
-
21
-
-
0347621463
-
Statistical implications of pooling RNA samples for microarray experiments
-
Peng, X., Wood, C. L., Blalock, E. M., Chen, K. C., Landfield, P. W., and Stromberg, A. J. (2003) Statistical implications of pooling RNA samples for microarray experiments, BMC Bioinformatics. 4, 26.
-
(2003)
BMC Bioinformatics
, vol.4
, pp. 26
-
-
Peng, X.1
Wood, C.L.2
Blalock, E.M.3
Chen, K.C.4
Landfield, P.W.5
Stromberg, A.J.6
|