메뉴 건너뛰기




Volumn 60, Issue 2, 2011, Pages 338-344

Rapid phylogenetic identification of members of the Pseudomonas syringae species complex using the rpoD locus

Author keywords

Genomospecies; Phylogeny; Pseudomonas syringae; rpoD

Indexed keywords

BACTERIAL DISEASE; CORRELATION; HOST RANGE; PHYLOGENETICS; PHYLOGENY; RELATEDNESS;

EID: 79952078375     PISSN: 00320862     EISSN: 13653059     Source Type: Journal    
DOI: 10.1111/j.1365-3059.2010.02366.x     Document Type: Article
Times cited : (91)

References (22)
  • 1
    • 20444387553 scopus 로고    scopus 로고
    • Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates
    • Ait Tayeb L, Ageron E, Grimont F, Grimont PAD, 2005. Molecular phylogeny of the genus Pseudomonas based on rpoB sequences and application for the identification of isolates. Research in Microbiology 156, 763-73.
    • (2005) Research in Microbiology , vol.156 , pp. 763-773
    • Ait Tayeb, L.1    Ageron, E.2    Grimont, F.3    Grimont, P.A.D.4
  • 2
    • 31344467837 scopus 로고    scopus 로고
    • Biological and molecular evidence that Pseudomonas syringae pathovars coronafaciens, striafaciens and garcae are likely the same pathovar
    • Barta TM, Willis DK, 2005. Biological and molecular evidence that Pseudomonas syringae pathovars coronafaciens, striafaciens and garcae are likely the same pathovar. Journal of Phytopathology 153, 492-9.
    • (2005) Journal of Phytopathology , vol.153 , pp. 492-499
    • Barta, T.M.1    Willis, D.K.2
  • 6
    • 0027968068 scopus 로고
    • CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Higgins DG, Thompson JD, 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22, 4673-80.
    • (1994) Nucleic Acids Research , vol.22 , pp. 4673-4680
    • Higgins, D.G.1    Thompson, J.D.2
  • 9
    • 0030459930 scopus 로고    scopus 로고
    • The determination and comparison of the 16S rRNA gene sequence of species of the genus Pseudomonas (sensu stricto) and estimation of the natural intrageneric relationships
    • Moore ERB, Mau M, Arnscheidt A et al., 1996. The determination and comparison of the 16S rRNA gene sequence of species of the genus Pseudomonas (sensu stricto) and estimation of the natural intrageneric relationships. Systematic and Applied Microbiology 19, 478-92.
    • (1996) Systematic and Applied Microbiology , vol.19 , pp. 478-492
    • Moore, E.R.B.1    Mau, M.2    Arnscheidt, A.3
  • 11
    • 1642319596 scopus 로고    scopus 로고
    • Evolution of the core genome of Pseudomonas syringae, a highly clonal, endemic plant pathogen
    • Sarkar SF, Guttman DS, 2004. Evolution of the core genome of Pseudomonas syringae, a highly clonal, endemic plant pathogen. Applied and Environmental Microbiology 70, 1999-2012.
    • (2004) Applied and Environmental Microbiology , vol.70 , pp. 1999-2012
    • Sarkar, S.F.1    Guttman, D.S.2
  • 12
    • 33750471586 scopus 로고    scopus 로고
    • Comparative genomics of host-specific virulence in Pseudomonas syringae
    • Sarkar SF, Gordon SJ, Martin GB, Guttman DS, 2006. Comparative genomics of host-specific virulence in Pseudomonas syringae. Genetics 174, 1041-56.
    • (2006) Genetics , vol.174 , pp. 1041-1056
    • Sarkar, S.F.1    Gordon, S.J.2    Martin, G.B.3    Guttman, D.S.4
  • 13
    • 0033278645 scopus 로고    scopus 로고
    • Phylogenetic analysis of Pseudomonas syringae pathovars suggests the horizontal gene transfer of argK and the evolutionary stability of hrp gene cluster
    • Sawada H, Suzuki F, Matsuda I, Saitou N, 1999. Phylogenetic analysis of Pseudomonas syringae pathovars suggests the horizontal gene transfer of argK and the evolutionary stability of hrp gene cluster. Journal of Molecular Evolution 49, 627-44.
    • (1999) Journal of Molecular Evolution , vol.49 , pp. 627-644
    • Sawada, H.1    Suzuki, F.2    Matsuda, I.3    Saitou, N.4
  • 14
    • 0018366934 scopus 로고
    • Synonomy of Pseudomonas coronafaciens pathovar zeae, Pseudomonas coronafaciens subsp. atropurpurea, and Pseudomonas striafaciens
    • Schaad NW, Cunfer BM, 1979. Synonomy of Pseudomonas coronafaciens pathovar zeae, Pseudomonas coronafaciens subsp. atropurpurea, and Pseudomonas striafaciens. International Journal of Systematic Bacteriology 29, 213-21.
    • (1979) International Journal of Systematic Bacteriology , vol.29 , pp. 213-221
    • Schaad, N.W.1    Cunfer, B.M.2
  • 15
    • 0003790348 scopus 로고
    • Approved Lists of Bacterial Names
    • Washington DC, USA: American Society for Microbiology.
    • Skerman VBD, McGowan V, Sneath PHA, 1989. In: Approved Lists of Bacterial Names. Washington DC, USA: American Society for Microbiology.
    • (1989)
    • Skerman, V.B.D.1    McGowan, V.2    Sneath, P.H.A.3
  • 17
    • 0026554882 scopus 로고
    • Grouping of plant-pathogenic and some other Pseudomonas spp. by using cellular fatty acid profiles
    • Stead DE, 1992. Grouping of plant-pathogenic and some other Pseudomonas spp. by using cellular fatty acid profiles. International Journal of Systematic Bacteriology 42, 281-95.
    • (1992) International Journal of Systematic Bacteriology , vol.42 , pp. 281-295
    • Stead, D.E.1
  • 18
    • 0021716351 scopus 로고
    • Estimation of evolutionary distance between nucleotide sequences
    • Tajima F, Nei M, 1984. Estimation of evolutionary distance between nucleotide sequences. Molecular Biology and Evolution 1, 269-85.
    • (1984) Molecular Biology and Evolution , vol.1 , pp. 269-285
    • Tajima, F.1    Nei, M.2
  • 19
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S, 2007. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Molecular Biology and Evolution 24, 1596-9.
    • (2007) Molecular Biology and Evolution , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 21
    • 0033764790 scopus 로고    scopus 로고
    • Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes
    • Yamamoto S, Kasai H, Arnold D, Jackson R, Vivian A, Harayama S, 2000. Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes. Microbiology 146, 2385-94.
    • (2000) Microbiology , vol.146 , pp. 2385-2394
    • Yamamoto, S.1    Kasai, H.2    Arnold, D.3    Jackson, R.4    Vivian, A.5    Harayama, S.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.