메뉴 건너뛰기




Volumn 38, Issue 2, 2011, Pages 177-184

Method to analyze gene promoter methylation inhibition effect on binding of transcription factors

Author keywords

Analysis method; DNAmethylation; Gene promoter; Transcription factor

Indexed keywords


EID: 79951902302     PISSN: 10003282     EISSN: None     Source Type: Journal    
DOI: 10.3724/SP.J.1206.2010.00355     Document Type: Article
Times cited : (3)

References (15)
  • 1
    • 0035839057 scopus 로고    scopus 로고
    • The role of DNA methylation in mammalian epigenetics
    • DOI 10.1126/science.1063852
    • Jones P, Takai D. The role of DNA methylation in mammalian epigenetics. Science, 2001, 293(5532): 1068-1070 (Pubitemid 32758075)
    • (2001) Science , vol.293 , Issue.5532 , pp. 1068-1070
    • Jones, P.A.1    Takai, D.2
  • 2
    • 33845880624 scopus 로고    scopus 로고
    • Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription
    • Zilberman D, Gehring M, Tran R K, et al. Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription. Nature Genetics, 2006, 39(11): 61-69
    • (2006) Nature Genetics , vol.39 , Issue.11 , pp. 61-69
    • Zilberman, D.1    Gehring, M.2    Tran, R.K.3
  • 3
    • 22844457491 scopus 로고    scopus 로고
    • DNA methylation and human disease
    • DOI 10.1038/nrg1655
    • Robertson K. DNA methylation and human disease. Nature Reviews Genetics, 2005, 6(8): 597-610 (Pubitemid 41044297)
    • (2005) Nature Reviews Genetics , vol.6 , Issue.8 , pp. 597-610
    • Robertson, K.D.1
  • 5
    • 77956311283 scopus 로고    scopus 로고
    • Astudy of the influence of sex on genome wide methylation
    • Liu J, Morgan M, Hutchison K, et al. Astudy of the influence of sex on genome wide methylation. PLoS One, 2010, 5(4): 1-8
    • (2010) PLoS One , vol.5 , Issue.4 , pp. 1-8
    • Liu, J.1    Morgan, M.2    Hutchison, K.3
  • 6
    • 77955288574 scopus 로고    scopus 로고
    • Interplay between DNAmethylation and transcription factor availability: Implications for developmental activation of the mouse myogenin gene
    • Daniela P, Dennis S, Peter W J R, et al. Interplay between DNAmethylation and transcription factor availability: implications for developmental activation of the mouse myogenin gene. Mol Cell Biol, 2010, 30(15): 3805-3815
    • (2010) Mol Cell Biol , vol.30 , Issue.15 , pp. 3805-3815
    • Daniela, P.1    Dennis, S.2    Peter, W.J.R.3
  • 7
    • 34547866080 scopus 로고    scopus 로고
    • STOP: Searching for transcription factor motifs using gene expression
    • DOI 10.1093/bioinformatics/btm249
    • Hertzberg L, Izraeli S, Domany E, et al. STOP: searching for transcription factor motifs using gene expression. Bioinformatics, 2007, 23(14): 1737-1743 (Pubitemid 47250305)
    • (2007) Bioinformatics , vol.23 , Issue.14 , pp. 1737-1743
    • Hertzberg, L.1    Izraeli, S.2    Domany, E.3
  • 8
    • 52249086717 scopus 로고    scopus 로고
    • Transcription factor and microRNA regulation in androgen-dependent and -independent prostate cancer cells
    • Guohua W, Yadong W, Weixing F, et al. Transcription factor and microRNA regulation in androgen-dependent and -independent prostate cancer cells. BMC Genomics, 2008, 9(suppl 2): S22
    • (2008) BMC Genomics , vol.9 , Issue.SUPPL. 2
    • Guohua, W.1    Yadong, W.2    Weixing, F.3
  • 9
    • 33745609276 scopus 로고    scopus 로고
    • Inhibitors of differentiation (ID1, ID2, ID3 and ID4) genes are neuronal targets of MeCP2 that are elevated in Rett syndrome
    • DOI 10.1093/hmg/ddl124
    • Peddada S, Yasui D, LaSalle J, et al. Inhibitors of differentiation (ID1, ID2, ID3 and ID4) genes are neuronal targets of MeCP2 that are elevated in Rett syndrome. Human Molecular Genetics, 2006, 15(12): 2003-2014 (Pubitemid 43983274)
    • (2006) Human Molecular Genetics , vol.15 , Issue.12 , pp. 2003-2014
    • Peddada, S.1    Yasui, D.H.2    LaSalle, J.M.3
  • 10
    • 37649022627 scopus 로고    scopus 로고
    • Integrated epigenomic analyses of neuronal MeCP2 reveal a role for long-range interaction with active genes
    • Yasui D, Peddada S, Bieda M, et al. Integrated epigenomic analyses of neuronal MeCP2 reveal a role for long-range interaction with active genes. Proc Natl Acad Sci USA, 2007, 104 (49): 19416-19421
    • (2007) Proc Natl Acad Sci USA , vol.104 , Issue.49 , pp. 19416-19421
    • Yasui, D.1    Peddada, S.2    Bieda, M.3
  • 11
    • 46949098742 scopus 로고    scopus 로고
    • A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis
    • Thomas A D, Vardhman K R, Daniel J T, et al. A Bayesian deconvolution strategy for immunoprecipitation-based DNA methylome analysis. Nature Biotechnology, 2008, 26(7): 779-785
    • (2008) Nature Biotechnology , vol.26 , Issue.7 , pp. 779-785
    • Thomas, A.D.1    Vardhman, K.R.2    Daniel, J.T.3
  • 12
    • 40849137611 scopus 로고    scopus 로고
    • Identification of E2F1 as a positive transcriptional regulator for ?-catenin
    • Kim K, Oh M, Ki H, et al. Identification of E2F1 as a positive transcriptional regulator for ?-catenin. Biochem Biophys Res Communications, 2008, 369(2): 414-420
    • (2008) Biochem Biophys Res Communications , vol.369 , Issue.2 , pp. 414-420
    • Kim, K.1    Oh, M.2    Ki, H.3
  • 13
    • 62849114200 scopus 로고    scopus 로고
    • Regulation of clockcontrolled genes in mammals
    • Katarzyna B, Angela R, Szymon M K, et al. Regulation of clockcontrolled genes in mammals. PLoS ONE, 2009, 4(3): e4882
    • (2009) PLoS ONE , vol.4 , Issue.3
    • Katarzyna, B.1    Angela, R.2    Szymon, M.K.3
  • 15
    • 4344611473 scopus 로고    scopus 로고
    • All-trans retinoic acid-responsive genes identified in the human SH-SY5Y neuroblastoma cell line and their regulated expression in the nervous system of early embryos
    • DOI 10.1515/BC.2004.075
    • Merrill R A, Ahrens J M, Kaiser M E, et al. All-trans retinoic acid-responsive genes identified in the human SH-SY5Y neuroblastoma cell line and their regulated expression in the nervous system of early embryos. Biological Chemistry, 2004, 385(7): 605-614 (Pubitemid 39144942)
    • (2004) Biological Chemistry , vol.385 , Issue.7 , pp. 605-614
    • Merrill, R.A.1    Ahrens, J.M.2    Kaiser, M.E.3    Federhart, K.S.4    Poon, V.Y.5    Clagett-Dame, M.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.