Immunological detection of UV induced cyclobutane pyrimidine dimers and (6-4) photoproducts in DNA from reference bacteria and natural aquatic populations

Journal of Microbiological Methods

Volumn 84, Issue 3, 2011, Pages 435-441

  Stephanie, Kraft ^a   Ursula, Obst ^a   Thomas, Schwartz ^a  

^a KARLSRUHE INSTITUTE OF TECHNOLOGY   (Germany)

Author keywords

Bacteria; DNA photoproducts; Immunoassay; Inactivation; Natural population; Re growth; UV irradiation

Indexed keywords

BACTERIAL DNA; MONOCLONAL ANTIBODY; PYRIMIDINE DIMER; PYRIMIDINE DIMER ANTIBODY; UNCLASSIFIED DRUG;

ANTIBODY SPECIFICITY; AQUATIC ENVIRONMENT; ARTICLE; BACTERIAL GROWTH; CELL DENSITY; CONTROLLED STUDY; DNA DAMAGE; DNA DETERMINATION; DNA REPAIR; ENTEROCOCCUS FAECIUM; GROWTH RATE; IMMUNOASSAY; MICROBIAL COMMUNITY; NONHUMAN; PRIORITY JOURNAL; PSEUDOMONAS AERUGINOSA; RADIATION DOSE; RADIATION EXPOSURE; SPECIES HABITAT; SUNLIGHT; ULTRAVIOLET RADIATION;

BACTERIA; DNA; DNA DAMAGE; IMMUNOASSAY; MICROBIAL VIABILITY; PYRIMIDINE DIMERS; ULTRAVIOLET RAYS; WATER MICROBIOLOGY;

BACTERIA (MICROORGANISMS); ENTEROCOCCUS FAECIUM; PSEUDOMONAS AERUGINOSA;

EID: 79951812184     PISSN: 01677012     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mimet.2011.01.004     Document Type: Article

References (24)

1. Al-Adhami B.H., Nicholas R.A.B., Kusel J.R., O'Grady J., Smith H.V. Detection of UV-induced thymine dimers in individual Cryptospordium paruum and Cryptospordium hominis oocysts by immunofluorescence microscopy. Appl. Environ. Microbiol. 2007, 73:947-955.
2. Alonso-Sáez L., Gasol J., Lefort T., Hofer J., Sommaruga R. Effect of natural sunlight on bacterial activity and differential sensitivity of natural bacterioplankton groups in northeastern Mediterranean coastal waters. Appl. Environ. Microbiol. 2006, 72:5806-5813.
3. Blachtley E.R.R., Gong W.L., Alleman J.E., Rose J.B., Huffman D.E., Otaki M., Lisle J.T. Effects of wastewater disinfection on waterborne bacteria and viruses. Water Environ. Res. 2007, 79:81-92.
4. Crockett C.S. The role of wastewater treatment in protecting water supplies against emerging pathogens. Water Environ. Res. 2007, 79:221-232.
5. Häder D.T., Shina R.P. Solar ultraviolet radiation induced DNA damage in aquatic organisms: potential environmental impact. Mutat. Res. 2005, 571:221-233.
6. Hijnen W.A., Beerendonk E.F., Medema G.J. Inactivation credit of UV irradiation for viruses, bacteria and protozoan (oo)cysts in water: a review. Water Res. 2006, 40:3-22.
7. Jungfer C., Schwartz T., Obst U. UV-induced dark repair mechanisms in bacteria associated with drinking water. Water Res. 2007, 41:188-196.
8. Katiyar S.K., Matsui M.S., Mukhtar H. Kinetics of UV light-induced cyclobutane pyrimidine dimers in human skin in vivo: an immunohistochemical analysis of both epidermis and dermis. Photochem. Photobiol. 2000, 72:788-793.
9. Linden K.G., Shin G.A., Sobsey M.D. Comparative effectiveness of UV wavelengths for the inactivation of Cryptospodium parvum oocysts in water. Water Sci. Technol. 2001, 43:171-174.
10. Matsumura, Y., and Ananthaswamy, H.M., 2002. Short term and long term cellular and molecular events following UV irradiation of skin: implications for molecular medicine DNA. Expert Reviews in Molecular Medicine 4, p. 1-22; Published online by Cambridge University Press (ISSN 1462-3994, short code: txt001 hah).
11. McCready S. A dot-blot immunoassay for measuring repair of ultraviolet photoproducts. Meth. Mol. Biol. 2006, 314:229-238.
12. Mitchell D.J., Karentz D. The induction and repair of DNA photodamage in the environment. Environmental UV photobiology 1993, 345-377. Plenum Press, New York, N.Y. A.R. Young, L.O. Bjorn, J. Moan, W. Nultsch (Eds.).
13. Möller R., Douki T., Cadet J., Stackebrandt E., Nicholson W., Rettberg P., Reitz G., Horneck G. UV-radiation-induced formation of DNA bipyrimidine photoproducts in Bacillus subtilis endospores and their repair during germination. Int. Microbiol. 2007, 10:39-46.
14. Mori T., Nakane M., Hattori T., Matasunaga T., Ihara M., Nikaido O. Simultaneous establishment of monoclonal antibodies specific for either cyclobutane pyrimidine dimer or 6-4 photoproduct from the same mouse immunized with Ultraviolet-irradiated DNA. Photochem. Photobiol. 1991, 54:225-232.
15. Nishiwaki Y., Kobayashi N., Imoto K., Iwamoto T.A., Yamamoto A., Katsumi S., Shirai T., Sugiura S., Nakamura Y., Sarasin A., Miyagawa S., Mori T. Trichothiodystrophy fibroblasts are deficient in the repair of ultraviolet-induced cyclobutane pyrimidine dimers and (6-4)photoproducts. J. Invest. Dermatol. 2004, 122:526-532.
16. Peccia J., Herendez M. Rapid immunoassays for detection of UV-induced cyclobutane pyrimidine dimers in whole bacteria cells. Appl. Environ. Microbiol. 2002, 68:2542-2549.
17. Schuch A.P., da Silva Galhardo R., de Lima-Bessa K.M., Schuch N.J., Menck C.F.M. Development of a DNA dosimeter system for monitoring the effects of solar ultraviolet radiation. Photochem. Photobiol. Sci. 2008, 8:111-120.
18. Schul W., Jans J., Rijksen Y.M., Klemann K.H., Eker A.P., de Wit J., Nikaido O., Nakajima S., Yasui A., Hoeijmakers J.H., van der Horst G.T. Enhanced repair of cyclobutane pyrimidine dimers and improved UV resistance in photolyase transgenic mice. EMBO 2002, 21:4719-4729.
19. Slieman T.A., Rebell R., Nicholson W. Spore photoproduct (SP) lyase from Bacillus subtilis specifically binds to and cleaves SP (5-thyminyl-5,6-dihydrothymine) but not cyclobutane pyrimidine dimers in UV-irradiated DNA. J. Bacteriol. 2000, 182:6412-6417.
20. Sommaruga R. Perspectives and research on environmental effects of ultraviolet radiation. Photochem. Photobiol. Sci. 2009, 8:1217.
21. Sommer R., Cabaj A., Sandu T., Lhotsky M. Measurement of UV radiation using suspensions of microorganisms. J. Photochem. Photobiol. B 1999, 53:1-6.
22. Sommer R., Lhotsky M., Haider T., Cabaj A. UV inactivation, liquid-holding recovery, and photoreactivation of Escherichia coli O157 and other pathogenic Escherichia coli strains in water. J. Food Prot. 2000, 63:1015-1020.
23. Süss J., Volz S., Obst U., Schwartz T. Application of a molecular biology concept for the detection of DNA damage and repair during UV disinfection. Water Res. 2009, 43:3705-3716.
24. Yamamoto A., Hirouchi T., Mori T., Teranishi M., Hidema J., Morioka H., Kumagai T., Yamamoto K. Biochemical and biological properties of DNA photolyases derived from ultraviolet-sensitive rice cultivars. Genes Genet. Syst. 2007, 82:311-319.