RT-PCR evaluation for identification and sequence analysis of foot-and-mouth disease serotype O from 2006 to 2007 in Punjab, Pakistan

Comparative Immunology, Microbiology and Infectious Diseases

Volumn 34, Issue 2, 2011, Pages 95-101

  Saeed, Ali ^a   Khan, Qaiser Mahmood ^a   Waheed, Usman ^a   Arshad, Memoona ^a   Asif, Muhammad ^a   Farooq, Muhammad ^a  

^a NATIONAL INSTITUTE FOR BIOTECHNOLOGY AND GENETIC ENGINEERING NIBGE   (Pakistan)

Author keywords

Foot and mouth disease; Reverse transcription polymerase chain reaction; Serotype O

Indexed keywords

5' UNTRANSLATED REGION; ANIMAL TISSUE; ARTICLE; BODY FLUID; EPIDEMIC; FOOT AND MOUTH DISEASE; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PAKISTAN; PHYLOGENY; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS; SEROTYPE; SEROTYPE O; TISSUE SECTION; UNINDEXED SEQUENCE; VIRUS GENE; VP1 GENE;

ANIMALS; CATTLE; FOOT-AND-MOUTH DISEASE; FOOT-AND-MOUTH DISEASE VIRUS; PAKISTAN; PHYLOGENY; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; SEROTYPING;

EID: 79951767810     PISSN: 01479571     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cimid.2009.10.004     Document Type: Article

References (20)

1. Bronsvoort B.M., Radford A.D., Tanya V.N., Nfon C., Kitching R.P., Morgan K.L. Molecular epidemiology of foot-and-mouth disease viruses in the Adamawa province of Cameroon. J Clin Microbiol 2004, 42:2186-2196.
2. Drew T.W., Yapp F., Paton D.J. The detection of bovine viral diarrhoea virus in bulk milk samples by the use of a single-tube RTPCR. Vet Microbiol 1999, 64:145-154.
3. Heath G.S., King D.P., Turner J.L.E., Wakeley P.R., Banks M. Use of an internal standard in a TaqMan® nested reverse transcriptionpolymerase chain reaction for the detection of bovine viral diarrhoea virus. Vet Microbiol 2003, 96:357-366.
4. Knowles N.J., Samuel A.R., Davies P.R., Kitching R.P. Donaldson AI outbreak of foot-and-mouth disease virus serotype O in the UK caused by a pandemic strain. Vet Rec 2001, 148:258-259.
5. Knowles N.J., Samuel A.R. Molecular epidemiology of foot and mouth disease virus. Virus Res 2003, 91:65-80.
6. Birnboim H.C., Doly J. A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res 1979, 1513-1523.
7. Cheung A., De LaMarter J., Weiss S., Kupper H. Comparison of the major antigenic determinants of different serotypes of foot-and-mouth disease virus. J Virol 1983, 48:451-459.
8. Giridharan P., Hemadri D., Tosh C., Sanyal A., Bandyopadhyay S.K. Development and evaluation of a multiplex PCR for differentiation of foot-and-mouth disease virus strains native to India. J Virol Methods 2005, 126:1-11.
9. Kitching R.P. A recent history of foot-and-mouth disease. J Comp Pathol 1998, 118:89-108.
10. Kitching R.P. Foot-and-mouth disease: current world situation. Vaccine 1999, 17:1772-1774.
11. Perez A.M., Thurmond M.C., Carpenter T.E. Probability co-kringing estimation of foot and mouth disease spatial distribution in Pakistan. GisVet Draft conferences presentations 2004, http://www.gisvet.org/Conferences_2004_Presentations.
12. Racaniello V.R. Picornaviridae: the viruses and their replication. Fields virology 2001, Lippincott Williams and Wilkins, p. 658-722. 3rd ed.
13. Reid S.M., Forsyth M.A., Hutchings G.H., Ferris N.P. Comparison of reverse transcription polymerase chain reaction, enzyme linked immunosorbent assay and virus isolation for the routine diagnosis of foot-and-mouth disease. J Virol Methods 1998, 70:213-217.
14. Reid S.M., Hutchings G.H., Ferris N.P., De Clercq K. Diagnosis of foot-and-mouth disease by RT-PCR: evaluation of primers for serotypic characterisation of viral RNA in clinical samples. J Virol Methods 1999, 83:113-123.
15. Reid S.M., Ferris N.P., Hutchings G.H., Samuel A.R., Knowles N.J. Primary diagnosis of foot-and-mouth disease by reverse transcription polymerase chain reaction. J Virol Methods 2000, 89:167-176.
16. Reid S.M., Grierson S.S., Ferris N.P., Hutchings G.H., Alexandersen S. Evaluation of automated RT-PCR to accelerate the laboratory diagnosis of foot-and-mouth disease virus. J Virol Methods 2003, 107:129-139.
17. Reid S.M., Parida S., King D.P., Hutchings G.H., Shaw A.E., Ferris N.P., Zhang Z., Hillerton J.E., Paton D.J. Utility of automated real-time RT-PCR for the detection of foot-and-mouth disease virus excreted in milk. Vet Res 2006, 37:121-132.
18. Schley D., Gubbins S., Paton D.J. Quantifying the risk of localised animal movement bans for foot-and-mouth disease. PLoS ONE 2009, 4(5):e5481. 10.1371/journal.pone.0005481.
19. Shaw A.E., Reid S.M., King D.P., Hutchings G.H., Ferris N.P. Enhanced laboratory diagnosis of foot-and-mouth disease by real-time polymerase chain reaction. Rev Sci Tech Off Int Epizoot 2004, 23:1003-1009.
20. Zhang Z., Alexandersen S. Detection of carrier cattle and sheep persistently infected with foot-and-mouth disease virus by a rapid real-time RT-PCR assay. J Virol Methods 2003, 111:95-100.