-
1
-
-
33645034358
-
A comparison of variability and population structure for major histocompatibility complex and microsatellite loci in California coastal steelhead (Oncorhynchus mykiss Walbaum)
-
Aguilar A, Garza JC (2006) A comparison of variability and population structure for major histocompatibility complex and microsatellite loci in California coastal steelhead (Oncorhynchus mykiss Walbaum). Molecular Ecology, 15, 923-937.
-
(2006)
Molecular Ecology
, vol.15
, pp. 923-937
-
-
Aguilar, A.1
Garza, J.C.2
-
2
-
-
43949140483
-
Isolation of 15 single nucleotide polymorphisms from coastal steelhead, Oncorhynchus mykiss (Salmonidae)
-
Aguilar A, Garza JC (2008) Isolation of 15 single nucleotide polymorphisms from coastal steelhead, Oncorhynchus mykiss (Salmonidae). Molecular Ecology Resources, 8, 659-662.
-
(2008)
Molecular Ecology Resources
, vol.8
, pp. 659-662
-
-
Aguilar, A.1
Garza, J.C.2
-
3
-
-
33646199882
-
The power of single-nucleotide polymorphisms for large-scale parentage inference
-
Anderson EC, Garza JC (2006) The power of single-nucleotide polymorphisms for large-scale parentage inference. Genetics, 172, 2567-2582.
-
(2006)
Genetics
, vol.172
, pp. 2567-2582
-
-
Anderson, E.C.1
Garza, J.C.2
-
4
-
-
0034482922
-
Microsatellite DNA population structure and stock identification of steelhead trout (Oncorhynchus mykiss) in the Nass and Skeena Rivers in northern British Columbia
-
Beacham TD, Pollard S, Le KD (2000) Microsatellite DNA population structure and stock identification of steelhead trout (Oncorhynchus mykiss) in the Nass and Skeena Rivers in northern British Columbia. Marine Biotechnology, 2, 587-600.
-
(2000)
Marine Biotechnology
, vol.2
, pp. 587-600
-
-
Beacham, T.D.1
Pollard, S.2
Le, K.D.3
-
5
-
-
0003576389
-
GENETIX 4.05, logiciel sous Windows TM pour la génétique des populations
-
Laboratoire Génome, Populations, Interactions, CNRS UMR 5000, Université de Montpellier II, Montpellier (France).
-
Belkhir K, Borsa P, Chikhi L, Raufaste N, Bonhomme F (1996-2004) GENETIX 4.05, logiciel sous Windows TM pour la génétique des populations. Laboratoire Génome, Populations, Interactions, CNRS UMR 5000, Université de Montpellier II, Montpellier (France).
-
(1996)
-
-
Belkhir, K.1
Borsa, P.2
Chikhi, L.3
Raufaste, N.4
Bonhomme, F.5
-
6
-
-
0037687926
-
The utility of single nucleotide polymorphisms in inferences of population history
-
Brumfield RT, Beerli P, Nickerson DA, Edwards SV (2003) The utility of single nucleotide polymorphisms in inferences of population history. Trends in Ecology & Evolution, 18, 249-256.
-
(2003)
Trends in Ecology & Evolution
, vol.18
, pp. 249-256
-
-
Brumfield, R.T.1
Beerli, P.2
Nickerson, D.A.3
Edwards, S.V.4
-
8
-
-
0002036450
-
Ancestry of artificially propagated California rainbow trout strains
-
Busack CA, Gall GAE (1980) Ancestry of artificially propagated California rainbow trout strains. California Fish and Game, 66, 17-24.
-
(1980)
California Fish and Game
, vol.66
, pp. 17-24
-
-
Busack, C.A.1
Gall, G.A.E.2
-
9
-
-
79951737992
-
-
Status Review of West Coast Steelhead from Washington, Idaho, Oregon, and California. NOAA Technical Memorandum NMFS-NWFSC-27.
-
Busby PJ, Wainwright TC, Bryant GJ et al. (1996) Status Review of West Coast Steelhead from Washington, Idaho, Oregon, and California. NOAA Technical Memorandum NMFS-NWFSC-27.
-
(1996)
-
-
Busby, P.J.1
Wainwright, T.C.2
Bryant, G.J.3
-
10
-
-
71949101266
-
Single nucleotide polymorphism discovery in rainbow trout by deep sequencing of a reduced representation library
-
doi:10.1186/1471-2164-10-559.
-
Castaño-Sánchez C, Smith TPL, Wiedmann RT et al. (2009) Single nucleotide polymorphism discovery in rainbow trout by deep sequencing of a reduced representation library. BMC Genomics, 10, doi:10.1186/1471-2164-10-559.
-
(2009)
BMC Genomics
, vol.10
-
-
Castaño-Sánchez, C.1
Smith, T.P.L.2
Wiedmann, R.T.3
-
11
-
-
27544474337
-
Ascertainment bias in studies of human genome-wide polymorphism
-
Clark AG, Hubisz MJ, Bustamante CD, Williamson SH, Nielsen R (2005) Ascertainment bias in studies of human genome-wide polymorphism. Genome Research, 15, 1496-1502.
-
(2005)
Genome Research
, vol.15
, pp. 1496-1502
-
-
Clark, A.G.1
Hubisz, M.J.2
Bustamante, C.D.3
Williamson, S.H.4
Nielsen, R.5
-
12
-
-
70350541081
-
Population genetic structure and ancestry of Oncorhynchus mykiss populations above and below dams in south-central California
-
Clemento AJ, Anderson EC, Boughton D, Girman D, Garza JC (2009) Population genetic structure and ancestry of Oncorhynchus mykiss populations above and below dams in south-central California. Conservation Genetics, 10, 1321-1336.
-
(2009)
Conservation Genetics
, vol.10
, pp. 1321-1336
-
-
Clemento, A.J.1
Anderson, E.C.2
Boughton, D.3
Girman, D.4
Garza, J.C.5
-
13
-
-
37249041627
-
Introduction, establishment and effects of non-native salmonids: considering the risk of rainbow trout invasion in the United Kingdom
-
Fausch KD (2007) Introduction, establishment and effects of non-native salmonids: considering the risk of rainbow trout invasion in the United Kingdom. Journal of Fish Biology, 71, 1-32.
-
(2007)
Journal of Fish Biology
, vol.71
, pp. 1-32
-
-
Fausch, K.D.1
-
15
-
-
79951743876
-
Population genetic structure of Oncorhynchus mykiss in the California Central Valley
-
Report to the California Department of Fish and Game
-
Garza JC, Pearse DE (2008) Population genetic structure of Oncorhynchus mykiss in the California Central Valley. Report to the California Department of Fish and Game p. 54.
-
(2008)
, pp. 54
-
-
Garza, J.C.1
Pearse, D.E.2
-
16
-
-
12444280663
-
Mexican native trouts: a review of their history and current systematic and conservation status
-
Hendrickson DA, Perez HE, Findley LT et al. (2002) Mexican native trouts: a review of their history and current systematic and conservation status. Reviews in Fish Biology and Fisheries, 12, 273-316.
-
(2002)
Reviews in Fish Biology and Fisheries
, vol.12
, pp. 273-316
-
-
Hendrickson, D.A.1
Perez, H.E.2
Findley, L.T.3
-
17
-
-
0034755842
-
Comparative analysis of population structure across environments and geographic scales at Major Histocompatibility Complex and microsatellite Atlantic salmon (Salmo salar)
-
Landry C, Bernatchez L (2001) Comparative analysis of population structure across environments and geographic scales at Major Histocompatibility Complex and microsatellite Atlantic salmon (Salmo salar). Molecular Ecology, 10, 2525-2540.
-
(2001)
Molecular Ecology
, vol.10
, pp. 2525-2540
-
-
Landry, C.1
Bernatchez, L.2
-
18
-
-
79951740835
-
A microsatellite genome screen identifies chromosomal regions under differential selection in steelhead and rainbow trout (Oncorhynchus mykiss)
-
in press).
-
Martínez A, Garza JC, Pearse DE (in press) A microsatellite genome screen identifies chromosomal regions under differential selection in steelhead and rainbow trout (Oncorhynchus mykiss). Transactions of the American Fisheries Society.
-
Transactions of the American Fisheries Society
-
-
Martínez, A.1
Garza, J.C.2
Pearse, D.E.3
-
19
-
-
0034022213
-
The use of single-nucleotide polymorphism maps in pharmacogenomics
-
McCarthy JJ, Hilfiker R (2000) The use of single-nucleotide polymorphism maps in pharmacogenomics. Nature Biotechnology, 18, 505-508.
-
(2000)
Nature Biotechnology
, vol.18
, pp. 505-508
-
-
McCarthy, J.J.1
Hilfiker, R.2
-
20
-
-
0034522690
-
Mitochondrial variation in rainbow trout Oncorhynchus mykiss across its native range: testing biogeographical hypotheses and their relevance to conservation
-
McCusker MR, Parkinson E, Taylor EB (2000) Mitochondrial variation in rainbow trout Oncorhynchus mykiss across its native range: testing biogeographical hypotheses and their relevance to conservation. Molecular Ecology, 9, 2089-2108.
-
(2000)
Molecular Ecology
, vol.9
, pp. 2089-2108
-
-
McCusker, M.R.1
Parkinson, E.2
Taylor, E.B.3
-
21
-
-
36248939215
-
Population structure and partial anadromy in Oncorhynchus mykiss from Kamchatka: relevance for conservation strategies around the Pacific Rim
-
McPhee MV, Utter F, Stanford JA et al. (2007) Population structure and partial anadromy in Oncorhynchus mykiss from Kamchatka: relevance for conservation strategies around the Pacific Rim. Ecology of Freshwater Fish, 16, 539-547.
-
(2007)
Ecology of Freshwater Fish
, vol.16
, pp. 539-547
-
-
McPhee, M.V.1
Utter, F.2
Stanford, J.A.3
-
22
-
-
3242723429
-
A distinctive microsatellite locus that differentiates ocean-type from stream-type Chinook salmon in the interior Columbia River basin
-
Narum SR, Powell MS, Talbot AJ (2004) A distinctive microsatellite locus that differentiates ocean-type from stream-type Chinook salmon in the interior Columbia River basin. Transactions of the American Fisheries Society, 133, 1051-1055.
-
(2004)
Transactions of the American Fisheries Society
, vol.133
, pp. 1051-1055
-
-
Narum, S.R.1
Powell, M.S.2
Talbot, A.J.3
-
23
-
-
47649120138
-
Differentiating salmon populations at broad and fine geographical scales with microsatellites and single nucleotide polymorphisms
-
Narum SR, Banks M, Beacham TD et al. (2008) Differentiating salmon populations at broad and fine geographical scales with microsatellites and single nucleotide polymorphisms. Molecular Ecology, 17, 3464-3477.
-
(2008)
Molecular Ecology
, vol.17
, pp. 3464-3477
-
-
Narum, S.R.1
Banks, M.2
Beacham, T.D.3
-
24
-
-
0018147653
-
Estimation of average heterozygosity and genetic distance from a small number of individuals
-
Nei M (1978) Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics, 89, 583-590.
-
(1978)
Genetics
, vol.89
, pp. 583-590
-
-
Nei, M.1
-
25
-
-
41349118678
-
Endangered and threatened species: final listing determinations for 10 distinct population segments of West Coast Steelhead
-
NOAA-National Oceanographic and Atmospheric Administration .,
-
NOAA-National Oceanographic and Atmospheric Administration (2006) Endangered and threatened species: final listing determinations for 10 distinct population segments of West Coast Steelhead. US Federal Register 71, 833-862.
-
(2006)
US Federal Register
, vol.71
, pp. 833-862
-
-
-
26
-
-
0035011120
-
First documented case of anadromy in a population of introduced rainbow trout in Patagonia, Argentina
-
Pascual M, Bentzen P, Rossi CR et al. (2001) First documented case of anadromy in a population of introduced rainbow trout in Patagonia, Argentina. Transactions of the American Fisheries Society, 130, 53-67.
-
(2001)
Transactions of the American Fisheries Society
, vol.130
, pp. 53-67
-
-
Pascual, M.1
Bentzen, P.2
Rossi, C.R.3
-
27
-
-
35448968277
-
Population genetics of steelhead (Oncorhynchus mykiss) in the Klamath River
-
Pearse DE, Donohoe CJ, Garza JC (2007) Population genetics of steelhead (Oncorhynchus mykiss) in the Klamath River. Environmental Biology of Fishes, 80, 377-387.
-
(2007)
Environmental Biology of Fishes
, vol.80
, pp. 377-387
-
-
Pearse, D.E.1
Donohoe, C.J.2
Garza, J.C.3
-
28
-
-
69249205500
-
Over the falls? Rapid evolution of ecotypic differentiation in steelhead/rainbow trout (Oncorhynchus mykiss)
-
Pearse DE, Hayes SA, Bond MH et al. (2009) Over the falls? Rapid evolution of ecotypic differentiation in steelhead/rainbow trout (Oncorhynchus mykiss) Journal of Heredity, 100, 515-525.
-
(2009)
Journal of Heredity
, vol.100
, pp. 515-525
-
-
Pearse, D.E.1
Hayes, S.A.2
Bond, M.H.3
-
29
-
-
58049215494
-
A second generation genetic map for rainbow trout (Oncorhynchus mykiss)
-
9, doi:10.1186/1471-2156-9-74.
-
Rexroad CE, Palti Y, Gahr SA, Vallejo RL (2008) A second generation genetic map for rainbow trout (Oncorhynchus mykiss). BMC Genetics, 9, doi:10.1186/1471-2156-9-74.
-
(2008)
BMC Genetics
-
-
Rexroad, C.E.1
Palti, Y.2
Gahr, S.A.3
Vallejo, R.L.4
-
30
-
-
36849080837
-
GENEPOP '007: a complete re-implementation of the GENEPOP software for Windows and Linux
-
Rousset F (2008) GENEPOP '007: a complete re-implementation of the GENEPOP software for Windows and Linux. Molecular Ecology Resources, 8, 103-106.
-
(2008)
Molecular Ecology Resources
, vol.8
, pp. 103-106
-
-
Rousset, F.1
-
31
-
-
0033990048
-
Bioinformatics Methods and Protocols: Methods in Molecular Biology
-
In: (eds Krawetz S & Misener S) Humana Press, Totowa, NJ.
-
Rozen S, Skaletsky HJ (2000) Primer3 on the WWW for general users and for biologist programmers. In: Bioinformatics Methods and Protocols: Methods in Molecular Biology (eds Krawetz S & Misener S), pp. 365-386. Humana Press, Totowa, NJ.
-
(2000)
Primer3 on the WWW for general users and for biologist programmers
, pp. 365-386
-
-
Rozen, S.1
Skaletsky, H.J.2
-
32
-
-
0035865322
-
A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms
-
Sachidanandam R, Weissman D, Schmidt SC et al. (2001) A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms. Nature, 409, 928-933.
-
(2001)
Nature
, vol.409
, pp. 928-933
-
-
Sachidanandam, R.1
Weissman, D.2
Schmidt, S.C.3
-
33
-
-
38049125551
-
Development of a standardized DNA database for Chinook salmon
-
Seeb LW, Antonovich A, Banks MA et al. (2007) Development of a standardized DNA database for Chinook salmon. Fisheries, 32, 540-552.
-
(2007)
Fisheries
, vol.32
, pp. 540-552
-
-
Seeb, L.W.1
Antonovich, A.2
Banks, M.A.3
-
34
-
-
0002283527
-
The life histories of the steelhead rainbow trout (Salmo gairdneri gairdneri) and silver salmon (Oncorhynchus kisutch) with special reference to Waddell Creek, California, and recommendations regarding their management
-
Shapovalov LEO, Taft AC (1954) The life histories of the steelhead rainbow trout (Salmo gairdneri gairdneri) and silver salmon (Oncorhynchus kisutch) with special reference to Waddell Creek, California, and recommendations regarding their management. California Department of Fish and Game Fish Bulletin, 98, 5-375.
-
(1954)
California Department of Fish and Game Fish Bulletin
, vol.98
, pp. 5-375
-
-
Shapovalov, L.E.O.1
Taft, A.C.2
-
35
-
-
33646177325
-
Use of sequence data from rainbow trout and Atlantic salmon for SNP detection in Pacific salmon
-
Smith CT, Elfstrom CM, Seeb LW, Seeb JE (2005) Use of sequence data from rainbow trout and Atlantic salmon for SNP detection in Pacific salmon. Molecular Ecology, 14, 4193-4203.
-
(2005)
Molecular Ecology
, vol.14
, pp. 4193-4203
-
-
Smith, C.T.1
Elfstrom, C.M.2
Seeb, L.W.3
Seeb, J.E.4
-
36
-
-
0035983148
-
A review on SNP and other types of molecular markers and their use in animal genetics
-
Vignal A, Milan D, SanCristobal M, Eggen A (2002) A review on SNP and other types of molecular markers and their use in animal genetics. Genetics Selection Evolution, 34, 275-305.
-
(2002)
Genetics Selection Evolution
, vol.34
, pp. 275-305
-
-
Vignal, A.1
Milan, D.2
SanCristobal, M.3
Eggen, A.4
-
37
-
-
0032524383
-
Large-scale identification, mapping, and genotyping of single-nucleotide polymorphisms in the human genome
-
Wang DG, Fan JB, Siao CJ et al. (1998) Large-scale identification, mapping, and genotyping of single-nucleotide polymorphisms in the human genome. Science, 280, 1077-1082.
-
(1998)
Science
, vol.280
, pp. 1077-1082
-
-
Wang, D.G.1
Fan, J.B.2
Siao, C.J.3
-
38
-
-
0021566877
-
Estimating F-statistics for the analysis of population structure
-
Weir BS, Cockerham CC (1984) Estimating F-statistics for the analysis of population structure. Evolution, 38, 1358-1370.
-
(1984)
Evolution
, vol.38
, pp. 1358-1370
-
-
Weir, B.S.1
Cockerham, C.C.2
-
39
-
-
0035047177
-
Genetic characterization of hybridization and introgression between anadromous rainbow trout (Oncorhynchus mykiss irideus) and coastal cutthroat trout (O. clarki clarki)
-
Young WP, Ostberg CO, Keim P, Thorgaard GH (2001) Genetic characterization of hybridization and introgression between anadromous rainbow trout (Oncorhynchus mykiss irideus) and coastal cutthroat trout (O. clarki clarki). Molecular Ecology, 10, 921-930.
-
(2001)
Molecular Ecology
, vol.10
, pp. 921-930
-
-
Young, W.P.1
Ostberg, C.O.2
Keim, P.3
Thorgaard, G.H.4
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