Differential gene expression profiling in iprobenfos-exposed marine medaka by heterologous microarray hybridization

Toxicology and Environmental Health Sciences

Volumn 2, Issue 1, 2010, Pages 18-24

  Woo, Seonock ^a,c   Won, Hyokyoung ^a   Ryu, Jae Chun ^b   Yum, Seungshic ^a  

^a Korea Research Institute of Ships and Ocean Engineering   (South Korea)

^b Korea Institute of Science and Technology   (South Korea)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Differential gene expression profile; Heterologous hybridization; Iprobenfos (IBP); Marine medaka; Organophosphorus pesticide; Oryzias javanicus

Indexed keywords

EID: 79951510559     PISSN: 20059752     EISSN: 22337784     Source Type: Journal    
DOI: 10.1007/BF03216510     Document Type: Article

References (49)

1. Kumari, B., Madan, V. K. & Kathpal, T. S. Status of insecticide contamination of soil and water in Haryana, India. Environ. Monit. Assess. 136, 239-244 (2008).
2. Zulin, Z. et al. Determination and load of organophosphorus and organochlorine pesticides at water from Jiulong River Estuary, China. Mar. Pollut. Bull. 45, 397-402 (2002).
3. Comoretto, L., Arfib, B. & Chiron, S. Pesticides in the Rhone river delta (France): basic data for a field-based exposure assessment. Sci. Total Environ. 380, 124-132 (2007).
4. Hirano, T., Ishida, T., Oh, K. & Sudo, R. Biodegradation of chlordane and hexachlorobenzenes in river sediment. Chemosphere67, 428-434 (2007).
5. Li, D. et al. Seasonal and spatial distribution of nonylphenol and IBP in Saemangeum Bay, Korea. Mar. Pollut. Bull. 51, 966-974 (2005).
6. Konstantinou, I. K., Hela, D. G. & Albanis, T. A. The status of pesticide pollution in surface waters (rivers and lakes) of Greece. Part I. Review on occurrence and levels. Environ. Pollut. 141, 555-570 (2006).
7. Hernandez-Romero, A. H., Tovilla-Hernandez, C., Malo, E. A. & Bello-Mendoza, R. Water quality and presence of pesticides in a tropical coastal wetland in southern Mexico. Mar. Pollut. Bull. 48, 1130-1141 (2004).
8. Sanchez, M. E. et al. Influence of the application of sewage sludge on the degradation of pesticides in the soil. Chemosphere57, 673-679 (2004).
9. Eddy, S. F. & Storey, K. B. Comparative molecular physiological genomics. Heterologous probing of cDNA arrays. Methods Mol. Biol. 410, 81-110 (2008).
10. Kassahn, K. S. et al. Heterologous microarray experiments used to identify the early gene response to heat stress in a coral reef fish. Mol. Ecol. 16, 1749-1763 (2007).
11. Kirchner, S. et al. Salmonid microarrays identify intestinal genes that reliably monitor P deficiency in rainbow trout aquaculture. Anim. Genet. 38, 319-331 (2007).
12. Vontas, J. et al. Transcriptional analysis of insecticide resistance in Anopheles stephensi using cross-species microarray hybridization. Insect. Mol. Biol. 16, 315-324 (2007).
13. Bagnaresi, P. et al. Heterologous microarray experiments allow the identification of the early events associated with potato tuber cold sweetening. BMC Genomics9, 176 (2008).
14. Castilho, P. C., Buckley, B. A., Somero, G. & Block, B. A. Heterologous hybridization to a complementary DNA microarray reveals the effect of thermal acclimation in the endothermic bluefin tuna (Thunnus orientalis). Mol. Ecol. (2009).
15. Osuna-Jimenez, I. et al. Immune- and stress-related transcriptomic responses of Solea senegalensis stimulated with lipopolysaccharide and copper sulphate using heterologous cDNA microarrays. Fish Shellfish Immunol. 26, 699-706 (2009).
16. Shah, G. et al. Cross-species comparison of gene expression between human and porcine tissue, using single microarray platform-preliminary results. Clin. Transplant18Suppl 12, 76-80 (2004).
17. Lu, Y. R. et al. A preliminary study on the feasibility of gene expression profile of rhesus monkey detected with human microarray. Transplant Proc. 40, 598-602 (2008).
18. Buckley, B. A. Comparative environmental genomics in non-model species: using heterologous hybridization to DNA-based microarrays. J. Exp. Biol. 210, 1602-1606 (2007).
19. Cossins, A. R. & Crawford, D. L. Fish as models for environmental genomics. Nat. Rev. Genet. 6, 324-333 (2005).
20. Imai, S., Koyama, J. & Fujii, K. Effects of 17betaestradiol on the reproduction of Java-medaka (Oryzias javanicus), a new test fish species. Mar. Pollut. Bull. 51, 708-714 (2005).
21. Imai, S., Koyama, J. & Fujii, K. Effects of estrone on full life cycle of Java medaka (Oryzias javanicus), a new marine test fish. Environ. Toxicol. Chem. 26, 726-731 (2007).
22. Cheikyula, J. O., Koyama, J. & Uno, S. Comparative study of bioconcentration and EROD activity induction in the Japanese flounder, red sea bream, and Java medaka exposed to polycyclic aromatic hydrocarbons. Environ. Toxicol. 23, 354-362 (2008).
23. Koyama, J. et al. Java medaka: a proposed new marine test fish for ecotoxicology. Environ. Toxicol. 23, 487-491 (2008).
24. Woo, S. et al. Heavy metal-induced differential gene expression of metallothionein in Javanese medaka, Oryzias javanicus. Mar. Biotechnol. (NY)8, 654-662 (2006).
25. Woo, S., Yum, S., Kim, D. W. & Park, H. S. Transcripts level responses in a marine medaka (Oryzias javanicus) exposed to organophosphorus pesticide. Comp. Biochem. Physiol. C. Toxicol. Pharmacol. 149, 427-432 (2009).
26. Woo, S. et al. Effects of heavy metals on antioxidants and stress-responsive gene expression in Javanese medaka (Oryzias javanicus). Comp. Biochem. Physiol. C. Toxicol. Pharmacol. 149, 289-299 (2009).
27. Yu, R. M. et al. Induction of hepatic choriogenin mRNA expression in male marine medaka: a highly sensitive biomarker for environmental estrogens. Aquat. Toxicol. 77, 348-358 (2006).
28. Yokoe, T. et al. Clinical significance of growth differentiation factor 11 in colorectal cancer. Int. J. Oncol. 31, 1097-1101 (2007).
29. Mussunoor, S. & Murray, G. I. The role of annexins in tumour development and progression. J. Pathol. 216, 131-140 (2008).
30. Beato, M., Herrlich, P. & Schutz, G. Steroid hormone receptors: many actors in search of a plot. Cell83, 851-857 (1995).
31. Evans, R. M. The steroid and thyroid hormone receptor superfamily. Science240, 889-895 (1988).
32. Hawkins, M. B. et al. Identification of a third distinct estrogen receptor and reclassification of estrogen receptors in teleosts. Proc. Natl. Acad. Sci. USA97, 10751-10756 (2000).
33. Orlando, E. F., Katsu, Y., Miyagawa, S. & Iguchi, T. Cloning and differential expression of estrogen receptor and aromatase genes in the self-fertilizing hermaphrodite and male mangrove rivulus, Kryptolebias marmoratus. J. Mol. Endocrinol. 37, 353-365 (2006).
34. Yamaguchi, A. et al. Short-term effects of endocrinedisrupting chemicals on the expression of estrogenresponsive genes in male medaka (Oryzias latipes). Aquat. Toxicol. 72, 239-249 (2005).
35. Sabbah, M., Le Ricousse, S., Redeuilh, G. & Baulieu, E. E. Estrogen receptor-induced bending of the Xenopus vitellogenin A2 gene hormone response element. Biochem. Biophys. Res. Commun. 185, 944-952 (1992).
36. Wahli, W., Martinez, E., Corthesy, B. & Cardinaux, J. R. cis- and trans-acting elements of the estrogenregulated vitellogenin gene B1 of Xenopus laevis. J. Steroid. Biochem. 34, 17-32 (1989).
37. Sumpter, J. P. & Jobling, S. Vitellogenesis as a biomarker for estrogenic contamination of the aquatic environment. Environ. Health Perspect. 103Suppl 7, 173-178 (1995).
38. Lee, C., Na, J. G., Lee, K. C. & Park, K. Choriogenin mRNA induction in male medaka, Oryzias latipes as a biomarker of endocrine disruption. Aquat. Toxicol. 61, 233-241 (2002).
39. Kikuchi, K., Yamashita, M., Watabe, S. & Aida, K. The warm temperature acclimation-related 65-kDa protein, Wap65, in goldfish and its gene expression. J. Biol. Chem. 270, 17087-17092 (1995).
40. Gracey, A. Y., Troll, J. V. & Somero, G. N. Hypoxiainduced gene expression profiling in the euryoxic fishGillichthys mirabilis. Proc. Natl. Acad. Sci. USA98, 1993-1998 (2001).
41. Kikuchi, K., Watabe, S. & Aida, K. The Wap65 gene expression of goldfish (Carassius auratus) in association with warm water temperature as well as bacterial lipopolysaccharide (LPS). Fish. Physiol. Biochem. 17, 423-432 (1997).
42. Arosio, P. & Levi, S. Ferritin, iron homeostasis, and oxidative damage. Free Radic. Biol. Med. 33, 457-463 (2002).
43. Torti, S. V. et al. The molecular cloning and characterization of murine ferritin heavy chain, a tumor necrosis factor-inducible gene. J. Biol. Chem. 263, 12638-12644 (1988).
44. Torti, F. M. & Torti, S. V. Regulation of ferritin genes and protein. Blood99, 3505-3516 (2002).
45. Barbeito, A. G. et al. Abnormal iron metabolism and oxidative stress in mice expressing a mutant form of the ferritin light polypeptide gene. J. Neurochem. 109, 1067-1078 (2009).
46. Song, X. et al. A model for the quaternary structure of the proteasome activator PA28. J. Biol. Chem. 271, 26410-26417 (1996).
47. Baghdiguian, S. et al. Pathophysiology of limb girdle muscular dystrophy type 2A: hypothesis and new insights into the IkappaBalpha/NF-kappaB survival pathway in skeletal muscle. J. Mol. Med. 79, 254-261 (2001).
48. Hartmann, E. et al. A tetrameric complex of membrane proteins in the endoplasmic reticulum. Eur. J. Biochem. 214, 375-381 (1993).
49. Fons, R. D., Bogert, B. A. & Hegde, R. S. Substratespecific function of the translocon-associated protein complex during translocation across the ER membrane. J. Cell Biol. 160, 529-539 (2003).