메뉴 건너뛰기




Volumn 6, Issue 2, 2011, Pages

Metabolic robustness and network modularity: A model study

Author keywords

[No Author keywords available]

Indexed keywords

ENZYME;

EID: 79551636768     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0016605     Document Type: Article
Times cited : (38)

References (23)
  • 1
    • 0742305866 scopus 로고    scopus 로고
    • Network biology: Understanding the cell's functional organization
    • Barabási AL (2004) Network biology: Understanding the cell's functional organization. Nature Reviews Genetics 4: 101-114.
    • (2004) Nature Reviews Genetics , vol.4 , pp. 101-114
    • Barabási, A.L.1
  • 2
    • 74049087026 scopus 로고    scopus 로고
    • Community detection in graphs
    • Fortunato S (2010) Community detection in graphs. Physics Reports 486: 75-174.
    • (2010) Physics Reports , vol.486 , pp. 75-174
    • Fortunato, S.1
  • 3
    • 33745012299 scopus 로고    scopus 로고
    • Modularity and community structure in networks
    • Newman MEJ (2006) Modularity and community structure in networks. Proc Natl Acad Sci USA 103: 8577-8582.
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 8577-8582
    • Newman, M.E.J.1
  • 4
    • 34548425218 scopus 로고    scopus 로고
    • Currency and commodity metabolites: Their identification and relation to the modularity of metabolic networks
    • Huss M, Holme P (2007) Currency and commodity metabolites: Their identification and relation to the modularity of metabolic networks. IET Systems Biology 1: 280-285.
    • (2007) IET Systems Biology , vol.1 , pp. 280-285
    • Huss, M.1    Holme, P.2
  • 5
    • 77958455176 scopus 로고    scopus 로고
    • Substance graphs are optimal simple-graph representations of metabolism
    • Holme P, Huss M (2010) Substance graphs are optimal simple-graph representations of metabolism. Chinese Science Bulletin 55: 3161-3168.
    • (2010) Chinese Science Bulletin , vol.55 , pp. 3161-3168
    • Holme, P.1    Huss, M.2
  • 6
    • 33748673577 scopus 로고    scopus 로고
    • Hierarchical modularity of nested bow-ties in metabolic networks
    • Zhao J, Yu H, Luo JH, Cao ZW, Li YX (2006) Hierarchical modularity of nested bow-ties in metabolic networks. BMC Bioinformatics 7: 386.
    • (2006) BMC Bioinformatics , vol.7 , pp. 386
    • Zhao, J.1    Yu, H.2    Luo, J.H.3    Cao, Z.W.4    Li, Y.X.5
  • 9
    • 0141484562 scopus 로고    scopus 로고
    • Biological networks: The tinkerer as an engineer
    • Alon U (2003) Biological networks: The tinkerer as an engineer. Science 301: 1866-1867.
    • (2003) Science , vol.301 , pp. 1866-1867
    • Alon, U.1
  • 10
    • 51649104942 scopus 로고    scopus 로고
    • Cascading failure and robustness in metabolic networks
    • Smart AG, Amaral LAN, Ottino JM (2008) Cascading failure and robustness in metabolic networks. Proc Natl Acad Sci USA 105: 13223-13228.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 13223-13228
    • Smart, A.G.1    Amaral, L.A.N.2    Ottino, J.M.3
  • 11
    • 53149153588 scopus 로고    scopus 로고
    • Toward bio-inspired network robustness - step 1. modularity. In: Bio-Inspired Models of Network, Information and Computing Systems 2
    • New York: Association of Computing Machinery
    • Eum S, Arakawa S, Murata M (2007) Toward bio-inspired network robustness - step 1. modularity. In: Bio-Inspired Models of Network, Information and Computing Systems 2. New York: Association of Computing Machinery. pp 84-87.
    • (2007) , pp. 84-87
    • Eum, S.1    Arakawa, S.2    Murata, M.3
  • 13
    • 40149093604 scopus 로고    scopus 로고
    • Evolution of complex modular biological networks
    • Hinze A, Adami C (2008) Evolution of complex modular biological networks. PLoS Comput Biol 4: e23.
    • (2008) PLoS Comput Biol , vol.4
    • Hinze, A.1    Adami, C.2
  • 15
    • 70349759581 scopus 로고    scopus 로고
    • Model validation of simple-graph representations of metabolism
    • Holme P (2009) Model validation of simple-graph representations of metabolism. J Roy Soc Interface 40: 1027-1034.
    • (2009) J Roy Soc Interface , vol.40 , pp. 1027-1034
    • Holme, P.1
  • 16
    • 0026802334 scopus 로고
    • Metabolic control analysis: A survey of its theoretical and experimental development
    • Fell D (1992) Metabolic control analysis: a survey of its theoretical and experimental development. Biochem J 1: 313-330.
    • (1992) Biochem J , vol.1 , pp. 313-330
    • Fell, D.1
  • 17
    • 0033080396 scopus 로고    scopus 로고
    • Detection of elementary ux modes in biochemical networks: A promising tool for pathway analysis and metabolic engineering
    • Schuster S, Dandekar T, Fell D (1999) Detection of elementary ux modes in biochemical networks: A promising tool for pathway analysis and metabolic engineering. Trends Biotech 17: 53-60.
    • (1999) Trends Biotech , vol.17 , pp. 53-60
    • Schuster, S.1    Dandekar, T.2    Fell, D.3
  • 18
    • 1542286745 scopus 로고    scopus 로고
    • Quantifying modularity in the evolution of biomolecular systems
    • Snel B, Huynen MA (2004) Quantifying modularity in the evolution of biomolecular systems. Genome Research 14: 391-397.
    • (2004) Genome Research , vol.14 , pp. 391-397
    • Snel, B.1    Huynen, M.A.2
  • 20
    • 78649716727 scopus 로고    scopus 로고
    • Manufacturing molecules through metabolic engineering
    • Keasling JD (2010) Manufacturing molecules through metabolic engineering. Science 330: 1355-1358.
    • (2010) Science , vol.330 , pp. 1355-1358
    • Keasling, J.D.1
  • 22
    • 36348947993 scopus 로고    scopus 로고
    • Modularity from uctuations in random graphs and complex networks
    • Guimerà R, Sales-Pardo M, Nunes Amaral LA (2004) Modularity from uctuations in random graphs and complex networks. Phys Rev E 70: 025101.
    • (2004) Phys Rev E , vol.70 , pp. 025101
    • Guimerà, R.1    Sales-Pardo, M.2    Nunes Amaral, L.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.