-
1
-
-
0742305866
-
Network biology: Understanding the cell's functional organization
-
Barabási AL (2004) Network biology: Understanding the cell's functional organization. Nature Reviews Genetics 4: 101-114.
-
(2004)
Nature Reviews Genetics
, vol.4
, pp. 101-114
-
-
Barabási, A.L.1
-
2
-
-
74049087026
-
Community detection in graphs
-
Fortunato S (2010) Community detection in graphs. Physics Reports 486: 75-174.
-
(2010)
Physics Reports
, vol.486
, pp. 75-174
-
-
Fortunato, S.1
-
3
-
-
33745012299
-
Modularity and community structure in networks
-
Newman MEJ (2006) Modularity and community structure in networks. Proc Natl Acad Sci USA 103: 8577-8582.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 8577-8582
-
-
Newman, M.E.J.1
-
4
-
-
34548425218
-
Currency and commodity metabolites: Their identification and relation to the modularity of metabolic networks
-
Huss M, Holme P (2007) Currency and commodity metabolites: Their identification and relation to the modularity of metabolic networks. IET Systems Biology 1: 280-285.
-
(2007)
IET Systems Biology
, vol.1
, pp. 280-285
-
-
Huss, M.1
Holme, P.2
-
5
-
-
77958455176
-
Substance graphs are optimal simple-graph representations of metabolism
-
Holme P, Huss M (2010) Substance graphs are optimal simple-graph representations of metabolism. Chinese Science Bulletin 55: 3161-3168.
-
(2010)
Chinese Science Bulletin
, vol.55
, pp. 3161-3168
-
-
Holme, P.1
Huss, M.2
-
6
-
-
33748673577
-
Hierarchical modularity of nested bow-ties in metabolic networks
-
Zhao J, Yu H, Luo JH, Cao ZW, Li YX (2006) Hierarchical modularity of nested bow-ties in metabolic networks. BMC Bioinformatics 7: 386.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 386
-
-
Zhao, J.1
Yu, H.2
Luo, J.H.3
Cao, Z.W.4
Li, Y.X.5
-
7
-
-
0037199968
-
Hierarchical organization of modularity in metabolic networks
-
Ravasz E, Somera AL, Mongru DA, Oltvai ZN, Barabási AL (2002) Hierarchical organization of modularity in metabolic networks. Science 297: 1553-1555.
-
(2002)
Science
, vol.297
, pp. 1553-1555
-
-
Ravasz, E.1
Somera, A.L.2
Mongru, D.A.3
Oltvai, Z.N.4
Barabási, A.L.5
-
8
-
-
35548939345
-
Modular co-evolution of metabolic networks
-
Zhao J, Ding GH, Tao L, Yu H, Yu ZH, et al. (2007) Modular co-evolution of metabolic networks. BMC Bioinformatics 8: 311.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 311
-
-
Zhao, J.1
Ding, G.H.2
Tao, L.3
Yu, H.4
Yu, Z.H.5
-
9
-
-
0141484562
-
Biological networks: The tinkerer as an engineer
-
Alon U (2003) Biological networks: The tinkerer as an engineer. Science 301: 1866-1867.
-
(2003)
Science
, vol.301
, pp. 1866-1867
-
-
Alon, U.1
-
11
-
-
53149153588
-
Toward bio-inspired network robustness - step 1. modularity. In: Bio-Inspired Models of Network, Information and Computing Systems 2
-
New York: Association of Computing Machinery
-
Eum S, Arakawa S, Murata M (2007) Toward bio-inspired network robustness - step 1. modularity. In: Bio-Inspired Models of Network, Information and Computing Systems 2. New York: Association of Computing Machinery. pp 84-87.
-
(2007)
, pp. 84-87
-
-
Eum, S.1
Arakawa, S.2
Murata, M.3
-
13
-
-
40149093604
-
Evolution of complex modular biological networks
-
Hinze A, Adami C (2008) Evolution of complex modular biological networks. PLoS Comput Biol 4: e23.
-
(2008)
PLoS Comput Biol
, vol.4
-
-
Hinze, A.1
Adami, C.2
-
15
-
-
70349759581
-
Model validation of simple-graph representations of metabolism
-
Holme P (2009) Model validation of simple-graph representations of metabolism. J Roy Soc Interface 40: 1027-1034.
-
(2009)
J Roy Soc Interface
, vol.40
, pp. 1027-1034
-
-
Holme, P.1
-
16
-
-
0026802334
-
Metabolic control analysis: A survey of its theoretical and experimental development
-
Fell D (1992) Metabolic control analysis: a survey of its theoretical and experimental development. Biochem J 1: 313-330.
-
(1992)
Biochem J
, vol.1
, pp. 313-330
-
-
Fell, D.1
-
17
-
-
0033080396
-
Detection of elementary ux modes in biochemical networks: A promising tool for pathway analysis and metabolic engineering
-
Schuster S, Dandekar T, Fell D (1999) Detection of elementary ux modes in biochemical networks: A promising tool for pathway analysis and metabolic engineering. Trends Biotech 17: 53-60.
-
(1999)
Trends Biotech
, vol.17
, pp. 53-60
-
-
Schuster, S.1
Dandekar, T.2
Fell, D.3
-
18
-
-
1542286745
-
Quantifying modularity in the evolution of biomolecular systems
-
Snel B, Huynen MA (2004) Quantifying modularity in the evolution of biomolecular systems. Genome Research 14: 391-397.
-
(2004)
Genome Research
, vol.14
, pp. 391-397
-
-
Snel, B.1
Huynen, M.A.2
-
20
-
-
78649716727
-
Manufacturing molecules through metabolic engineering
-
Keasling JD (2010) Manufacturing molecules through metabolic engineering. Science 330: 1355-1358.
-
(2010)
Science
, vol.330
, pp. 1355-1358
-
-
Keasling, J.D.1
-
21
-
-
70350381772
-
Comparative analysis of modularity in biological systems
-
Li X, Erten S, Bebek G, Koyuturk M, Li J (2009) Comparative analysis of modularity in biological systems. 2009 Ohio Collaborative Conference on Bioinformatics. pp 104-109.
-
(2009)
2009 Ohio Collaborative Conference on Bioinformatics
, pp. 104-109
-
-
Li, X.1
Erten, S.2
Bebek, G.3
Koyuturk, M.4
Li, J.5
-
22
-
-
36348947993
-
Modularity from uctuations in random graphs and complex networks
-
Guimerà R, Sales-Pardo M, Nunes Amaral LA (2004) Modularity from uctuations in random graphs and complex networks. Phys Rev E 70: 025101.
-
(2004)
Phys Rev E
, vol.70
, pp. 025101
-
-
Guimerà, R.1
Sales-Pardo, M.2
Nunes Amaral, L.A.3
|