-
1
-
-
0034962167
-
Specific sequence elements in the 50 untranslated regions of rbcL and atpB gene mRNAs stabilize transcripts in the chloroplast of Chlamydomonas reinhardtii
-
Anthonisen I.L., Salvador M.L., Klein U. Specific sequence elements in the 50 untranslated regions of rbcL and atpB gene mRNAs stabilize transcripts in the chloroplast of Chlamydomonas reinhardtii. RNA 2001, 7:1024-1033.
-
(2001)
RNA
, vol.7
, pp. 1024-1033
-
-
Anthonisen, I.L.1
Salvador, M.L.2
Klein, U.3
-
2
-
-
0037054542
-
Characterization of Tbc2, a nucleus-encoded factor specifically required for translation of the chloroplast psbC mRNA in Chlamydomonas reinhardtii
-
Auchincloss A.H., Zerges W., Perron K., Girard-Bascou J., Rochaix J.D. Characterization of Tbc2, a nucleus-encoded factor specifically required for translation of the chloroplast psbC mRNA in Chlamydomonas reinhardtii. J Cell Biol 2002, 157:953-962.
-
(2002)
J Cell Biol
, vol.157
, pp. 953-962
-
-
Auchincloss, A.H.1
Zerges, W.2
Perron, K.3
Girard-Bascou, J.4
Rochaix, J.D.5
-
3
-
-
0028930788
-
An AU-rich element in the 3′ untranslated region of the spinach chloroplast petD gene participates in sequence-specific RNA-protein complex formation
-
Chen Q., Adams C.C., Usack L., Yang J., Monde R.A., Stern D.B. An AU-rich element in the 3′ untranslated region of the spinach chloroplast petD gene participates in sequence-specific RNA-protein complex formation. Mol Cell Biol 1995, 15:2010-2018.
-
(1995)
Mol Cell Biol
, vol.15
, pp. 2010-2018
-
-
Chen, Q.1
Adams, C.C.2
Usack, L.3
Yang, J.4
Monde, R.A.5
Stern, D.B.6
-
4
-
-
0028587976
-
Light-regulated translation of chloroplast messenger RNAs through redox potential
-
Danon A., Mayfield S.P. Light-regulated translation of chloroplast messenger RNAs through redox potential. Science 1994, 266:1717-1719.
-
(1994)
Science
, vol.266
, pp. 1717-1719
-
-
Danon, A.1
Mayfield, S.P.2
-
5
-
-
77953393143
-
Post-transcriptional control of chloroplast gene expression
-
del Campo E.M. Post-transcriptional control of chloroplast gene expression. Gene Reg Sys Biol 2009, 3:31-47.
-
(2009)
Gene Reg Sys Biol
, vol.3
, pp. 31-47
-
-
del Campo, E.M.1
-
6
-
-
0033199033
-
5′ to 3′ exoribonucleolytic activity is a normal component of chloroplast mRNA decay pathways
-
Drager R.G., Higgs D.C., Kindle K.L., Stern D.B. 5′ to 3′ exoribonucleolytic activity is a normal component of chloroplast mRNA decay pathways. Plant J 1999, 19:521-532.
-
(1999)
Plant J
, vol.19
, pp. 521-532
-
-
Drager, R.G.1
Higgs, D.C.2
Kindle, K.L.3
Stern, D.B.4
-
7
-
-
0022603813
-
Chloroplast gene expression and promoter identification in chloroplast extracts
-
Gruissem W., Greenberg B.M., Zurawski G., Hallick R.B. Chloroplast gene expression and promoter identification in chloroplast extracts. Methods Enzymol 1986, 118:253-270.
-
(1986)
Methods Enzymol
, vol.118
, pp. 253-270
-
-
Gruissem, W.1
Greenberg, B.M.2
Zurawski, G.3
Hallick, R.B.4
-
8
-
-
0031011722
-
The two RNA polymerases encoded by the nuclear and the plastid compartments transcribe distinct groups of genes in tobacco plastids
-
Hajdukiewicz P.T.J., Allison L.A., Maliga P. The two RNA polymerases encoded by the nuclear and the plastid compartments transcribe distinct groups of genes in tobacco plastids. EMBO J 1997, 16:4041-4048.
-
(1997)
EMBO J
, vol.16
, pp. 4041-4048
-
-
Hajdukiewicz, P.T.J.1
Allison, L.A.2
Maliga, P.3
-
9
-
-
0347519277
-
Molecular genetic analysis of chloroplast gene promoters dependent on SIG2, a nucleus-encoded sigma factor for the plastid-encoded RNA polymerase in Arabidopsis thaliana
-
Hanaoka M., Kanamaru K., Takahashi H., Tanaka K. Molecular genetic analysis of chloroplast gene promoters dependent on SIG2, a nucleus-encoded sigma factor for the plastid-encoded RNA polymerase in Arabidopsis thaliana. Nucleic Acids Res 2003, 31:7090-7098.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 7090-7098
-
-
Hanaoka, M.1
Kanamaru, K.2
Takahashi, H.3
Tanaka, K.4
-
10
-
-
1042291444
-
Functional Shine-Dalgarno-like sequences for translational initiation of chloroplast mRNAs
-
Hirose T., Sugiura M. Functional Shine-Dalgarno-like sequences for translational initiation of chloroplast mRNAs. Plant Cell Physiol 2004, 45:114-117.
-
(2004)
Plant Cell Physiol
, vol.45
, pp. 114-117
-
-
Hirose, T.1
Sugiura, M.2
-
11
-
-
0031452439
-
Protein disulfide isomerase as a regulator of chloroplast translational activation
-
Kim J., Mayfield S.P. Protein disulfide isomerase as a regulator of chloroplast translational activation. Science 1997, 278:1954-1957.
-
(1997)
Science
, vol.278
, pp. 1954-1957
-
-
Kim, J.1
Mayfield, S.P.2
-
12
-
-
0342520573
-
A chloroplastic RNA-binding protein is a new member of the PPR family
-
Lahmy S., Barneche F., Derancourt J., Filipowicz W., Delseny M., Echeverria M. A chloroplastic RNA-binding protein is a new member of the PPR family. FEBS Lett 2000, 480:255-260.
-
(2000)
FEBS Lett
, vol.480
, pp. 255-260
-
-
Lahmy, S.1
Barneche, F.2
Derancourt, J.3
Filipowicz, W.4
Delseny, M.5
Echeverria, M.6
-
13
-
-
0023544693
-
Isolation of RNA using guanidinium salts
-
MacDonald R.J., Swift A.E., Przybyla A.E., Chargwin J.M. Isolation of RNA using guanidinium salts. Methods Enzymol 1987, 152:219-227.
-
(1987)
Methods Enzymol
, vol.152
, pp. 219-227
-
-
MacDonald, R.J.1
Swift, A.E.2
Przybyla, A.E.3
Chargwin, J.M.4
-
14
-
-
0034682733
-
Stabilization of circular rpsT mRNA demonstrates the 59-end dependence of RNase E action in vivo
-
Mackie G.A. Stabilization of circular rpsT mRNA demonstrates the 59-end dependence of RNase E action in vivo. J Biol Chem 2000, 275:25069-25072.
-
(2000)
J Biol Chem
, vol.275
, pp. 25069-25072
-
-
Mackie, G.A.1
-
15
-
-
0033591465
-
Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure
-
Mathews D.H., Sabina J., Zuker M., Turner D.H. Expanded sequence dependence of thermodynamic parameters improves prediction of RNA secondary structure. J Mol Biol 1999, 288:911-940.
-
(1999)
J Mol Biol
, vol.288
, pp. 911-940
-
-
Mathews, D.H.1
Sabina, J.2
Zuker, M.3
Turner, D.H.4
-
16
-
-
0035793628
-
Light-associated and processing-dependent protein binding to 5′ regions of rbcL mRNA in the chloroplasts of a C4 plant
-
McCormac D.J., Litz H., Wang J., Gollnick P.D., Berry J.O. Light-associated and processing-dependent protein binding to 5′ regions of rbcL mRNA in the chloroplasts of a C4 plant. J Biol Chem 2001, 276:3476-3483.
-
(2001)
J Biol Chem
, vol.276
, pp. 3476-3483
-
-
McCormac, D.J.1
Litz, H.2
Wang, J.3
Gollnick, P.D.4
Berry, J.O.5
-
17
-
-
0033135557
-
The stromal protein large subunit of ribulose-1,5-bisphosphate carboxylase is translated on membrane-bound ribosomes
-
Muhlbauer S.K., Eichacker L.A. The stromal protein large subunit of ribulose-1,5-bisphosphate carboxylase is translated on membrane-bound ribosomes. Eur J Biochem 1999, 261:784-788.
-
(1999)
Eur J Biochem
, vol.261
, pp. 784-788
-
-
Muhlbauer, S.K.1
Eichacker, L.A.2
-
18
-
-
51249177648
-
Multiple transcripts for higher plant rbcL and atpB genes and localization of the transcription initiation site of the rbcL gene
-
Mullet J.E., Orozco E.M., Chua N.M. Multiple transcripts for higher plant rbcL and atpB genes and localization of the transcription initiation site of the rbcL gene. Plant Mol Biol 1985, 4:39-54.
-
(1985)
Plant Mol Biol
, vol.4
, pp. 39-54
-
-
Mullet, J.E.1
Orozco, E.M.2
Chua, N.M.3
-
19
-
-
0035808422
-
Chloroplast ribonucleoproteins function as a stabilizing factor of ribosome-free mRNAs in the stroma
-
Nakamura T., Ohta M., Sugiura M., Sugita M. Chloroplast ribonucleoproteins function as a stabilizing factor of ribosome-free mRNAs in the stroma. J Biol Chem 2001, 276:147-152.
-
(2001)
J Biol Chem
, vol.276
, pp. 147-152
-
-
Nakamura, T.1
Ohta, M.2
Sugiura, M.3
Sugita, M.4
-
20
-
-
0017613512
-
A simplification of the protein assay method of Lowry et al., which is more generally applicable
-
Peterson G.L. A simplification of the protein assay method of Lowry et al., which is more generally applicable. Anal Biochem 1977, 83:346-356.
-
(1977)
Anal Biochem
, vol.83
, pp. 346-356
-
-
Peterson, G.L.1
-
21
-
-
0037267882
-
Chloroplast redox signals: how photosynthesis controls its own genes
-
Pfannschmidt T. Chloroplast redox signals: how photosynthesis controls its own genes. Trends Plant Sci 2003, 8:33-41.
-
(2003)
Trends Plant Sci
, vol.8
, pp. 33-41
-
-
Pfannschmidt, T.1
-
22
-
-
0027538631
-
A methyl jasmonate-induced shift in the length of the 5′ untranslated region impairs translation of the plastid rbcL transcripts in barley
-
Reinbothe S., Reinbothe C., Heintzen C., Seidenbecher C., Parthier B. A methyl jasmonate-induced shift in the length of the 5′ untranslated region impairs translation of the plastid rbcL transcripts in barley. EMBO J 1993, 12:1505-1512.
-
(1993)
EMBO J
, vol.12
, pp. 1505-1512
-
-
Reinbothe, S.1
Reinbothe, C.2
Heintzen, C.3
Seidenbecher, C.4
Parthier, B.5
-
23
-
-
0033396787
-
The redox state regulates RNA degradation in the chloroplast of Chlamydomonas reinhardtii
-
Salvador M.L., Klein U. The redox state regulates RNA degradation in the chloroplast of Chlamydomonas reinhardtii. Plant Physiol 1999, 121:1367-1374.
-
(1999)
Plant Physiol
, vol.121
, pp. 1367-1374
-
-
Salvador, M.L.1
Klein, U.2
-
24
-
-
1542710228
-
Changes in the 5′-untranslated region of the rbcL gene accelerates transcript degradation more than 50-fold in the chloroplast of Chlamydomonas reinhardtii
-
Salvador M.L., Suay L., Anthonisen I.L., Klein U. Changes in the 5′-untranslated region of the rbcL gene accelerates transcript degradation more than 50-fold in the chloroplast of Chlamydomonas reinhardtii. Curr Genet 2004, 45:176-182.
-
(2004)
Curr Genet
, vol.45
, pp. 176-182
-
-
Salvador, M.L.1
Suay, L.2
Anthonisen, I.L.3
Klein, U.4
-
25
-
-
0031128133
-
Differential regulation of chloroplast gene expression in Chlamydomonas reinhardtii during photoacclimation: light stress transiently suppresses synthesis of the Rubisco LSU protein while enhancing synthesis of the PS II D1 protein
-
Shapira M., Lers A., Heifetz P., Irihimoritch V., Osmond B.C., Gillham N.W., et al. Differential regulation of chloroplast gene expression in Chlamydomonas reinhardtii during photoacclimation: light stress transiently suppresses synthesis of the Rubisco LSU protein while enhancing synthesis of the PS II D1 protein. Plant Mol Biol 1997, 33:1001-1011.
-
(1997)
Plant Mol Biol
, vol.33
, pp. 1001-1011
-
-
Shapira, M.1
Lers, A.2
Heifetz, P.3
Irihimoritch, V.4
Osmond, B.C.5
Gillham, N.W.6
-
26
-
-
0034755289
-
RNA-binding proteins interact specifically with the Arabidopsis chloroplast psbA mRNA 5′ untranslated region in a redox-dependent manner
-
Shen Y., Danon A., Christopher D.A. RNA-binding proteins interact specifically with the Arabidopsis chloroplast psbA mRNA 5′ untranslated region in a redox-dependent manner. Plant Cell Physiol 2001, 42:1071-1078.
-
(2001)
Plant Cell Physiol
, vol.42
, pp. 1071-1078
-
-
Shen, Y.1
Danon, A.2
Christopher, D.A.3
-
27
-
-
0020403028
-
The nucleotide sequence of the tobacco chloroplast gene for the large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase
-
Shinozaki K., Sugiura M. The nucleotide sequence of the tobacco chloroplast gene for the large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase. Gene 1982, 20:91-102.
-
(1982)
Gene
, vol.20
, pp. 91-102
-
-
Shinozaki, K.1
Sugiura, M.2
-
28
-
-
3543050696
-
Components involved in RNA-protein interaction at the 3′ untranslated region of the rbcL mRNA of Populus deltoides
-
Srivastava S., Trivedi P.K., Nath P. Components involved in RNA-protein interaction at the 3′ untranslated region of the rbcL mRNA of Populus deltoides. Plant Sci 2004, 167:765-772.
-
(2004)
Plant Sci
, vol.167
, pp. 765-772
-
-
Srivastava, S.1
Trivedi, P.K.2
Nath, P.3
-
30
-
-
24044495582
-
Specific roles of 5′ RNA secondary structures in stabilizing transcripts in chloroplasts
-
Suay L., Salvador M.L., Abesha E., Klein U. Specific roles of 5′ RNA secondary structures in stabilizing transcripts in chloroplasts. Nucleic Acids Res 2005, 3:4754-4761.
-
(2005)
Nucleic Acids Res
, vol.3
, pp. 4754-4761
-
-
Suay, L.1
Salvador, M.L.2
Abesha, E.3
Klein, U.4
-
31
-
-
33847273637
-
Distinct roles for the 5′ and 3′ untranslated regions in the degradation and accumulation of chloroplast tufA mRNA: identification of an early intermediate in the in vivo degradation pathway
-
Zicker A.A., Kadakia C.S., Herrin D.L. Distinct roles for the 5′ and 3′ untranslated regions in the degradation and accumulation of chloroplast tufA mRNA: identification of an early intermediate in the in vivo degradation pathway. Plant Mol Biol 2007, 63:689-902.
-
(2007)
Plant Mol Biol
, vol.63
, pp. 689-902
-
-
Zicker, A.A.1
Kadakia, C.S.2
Herrin, D.L.3
-
32
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker M. Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 2003, 31:3406-3415.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
|