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Volumn 31, Issue 24, 2003, Pages 7090-7098

Molecular genetic analysis of chloroplast gene promoters dependent on SIG2, a nucleus-encoded sigma factor for the plastid-encoded RNA polymerase, in Arabidopsis thaliana

Author keywords

[No Author keywords available]

Indexed keywords

ADENINE; CYTOSINE; DNA FRAGMENT; NUCLEASE S1; PLANT DNA; PLANT RNA; RECOMBINANT PROTEIN; RNA POLYMERASE; SIGMA FACTOR; TRANSFER RNA; URACIL;

EID: 0347519277     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/gkg935     Document Type: Article
Times cited : (81)

References (43)
  • 1
    • 0030267939 scopus 로고    scopus 로고
    • Regulation of gene expression in chloroplasts of higher plants
    • Sugita,M. and Sugiura,M. (1996) Regulation of gene expression in chloroplasts of higher plants. Plant Mol. Biol., 32, 315-326.
    • (1996) Plant Mol. Biol. , vol.32 , pp. 315-326
    • Sugita, M.1    Sugiura, M.2
  • 2
    • 0031934554 scopus 로고    scopus 로고
    • Two plastid RNA polymerases of higher plants: An evolving story
    • Maliga,P. (1998) Two plastid RNA polymerases of higher plants: an evolving story. Trends Plant Sci., 3, 4-6.
    • (1998) Trends Plant Sci. , vol.3 , pp. 4-6
    • Maliga, P.1
  • 3
    • 0032903448 scopus 로고    scopus 로고
    • Organellar RNA polymerases of higher plants
    • Hess,W.R. and Börner,T. (1999) Organellar RNA polymerases of higher plants. Int. Rev. Cytol., 190, 1-59.
    • (1999) Int. Rev. Cytol. , vol.190 , pp. 1-59
    • Hess, W.R.1    Börner, T.2
  • 4
    • 1842411934 scopus 로고    scopus 로고
    • Mitochondrial and chloroplast phage-type RNA polymerases in Arabidopsis
    • Hedtke,B., Börner,T. and Weihe,A. (1997) Mitochondrial and chloroplast phage-type RNA polymerases in Arabidopsis. Science, 277, 809-811.
    • (1997) Science , vol.277 , pp. 809-811
    • Hedtke, B.1    Börner, T.2    Weihe, A.3
  • 5
  • 6
    • 0031011722 scopus 로고    scopus 로고
    • The two RNA polymerases encoded by the nuclear and the plastid compartments transcribe distinct groups of genes in tobacco plastids
    • Hajdukiewicz,P.T., Allison,L.A. and Maliga,P. (1997) The two RNA polymerases encoded by the nuclear and the plastid compartments transcribe distinct groups of genes in tobacco plastids. EMBO J., 16, 4041-4048.
    • (1997) EMBO J. , vol.16 , pp. 4041-4048
    • Hajdukiewicz, P.T.1    Allison, L.A.2    Maliga, P.3
  • 7
    • 0029934521 scopus 로고    scopus 로고
    • Deletion of rpoB reveals a second distinct transcription system in plastids of higher plants
    • Allison,L.A., Simon,L.D. and Maliga,P. (1996) Deletion of rpoB reveals a second distinct transcription system in plastids of higher plants. EMBO J., 15, 2802-2809.
    • (1996) EMBO J. , vol.15 , pp. 2802-2809
    • Allison, L.A.1    Simon, L.D.2    Maliga, P.3
  • 9
    • 0034202992 scopus 로고    scopus 로고
    • The role of sigma factors in plastid transcription
    • Allison,L.A. (2000) The role of sigma factors in plastid transcription. Biochimie, 82, 537-548.
    • (2000) Biochimie , vol.82 , pp. 537-548
    • Allison, L.A.1
  • 10
    • 0029915741 scopus 로고    scopus 로고
    • Molecular characterization of a positively photoregulated nuclear gene for a chloroplast RNA polymerase sigma factor in Cyanidium caldarium
    • Liu,B. and Troxler,R.F. (1996) Molecular characterization of a positively photoregulated nuclear gene for a chloroplast RNA polymerase sigma factor in Cyanidium caldarium. Proc. Natl Acad. Sci. USA, 93, 3313-3318.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 3313-3318
    • Liu, B.1    Troxler, R.F.2
  • 11
    • 0030038746 scopus 로고    scopus 로고
    • Nuclear encoding of a chloroplast RNA polymerase sigma subunit in a red alga
    • Tanaka,K., Oikawa,K., Ohta,N., Kuroiwa,H., Kuroiwa,T. and Takahashi,H. (1996) Nuclear encoding of a chloroplast RNA polymerase sigma subunit in a red alga. Science, 272, 1932-1935.
    • (1996) Science , vol.272 , pp. 1932-1935
    • Tanaka, K.1    Oikawa, K.2    Ohta, N.3    Kuroiwa, H.4    Kuroiwa, T.5    Takahashi, H.6
  • 12
    • 0031449065 scopus 로고    scopus 로고
    • Leaf-specifically expressed genes for polypeptides destined for chloroplasts with domains of sigma70 factors of bacterial RNA polymerases in Arabidopsis thaliana
    • Isono,K., Shimizu,M., Yoshimoto,K., Niwa,Y., Satoh,K., Yokota,A. and Kobayashi,H. (1997) Leaf-specifically expressed genes for polypeptides destined for chloroplasts with domains of sigma70 factors of bacterial RNA polymerases in Arabidopsis thaliana. Proc. Natl Acad. Sci. USA, 94, 14948-14953.
    • (1997) Proc. Natl. Acad. Sci. USA , vol.94 , pp. 14948-14953
    • Isono, K.1    Shimizu, M.2    Yoshimoto, K.3    Niwa, Y.4    Satoh, K.5    Yokota, A.6    Kobayashi, H.7
  • 13
    • 0030843866 scopus 로고    scopus 로고
    • Characterization of three cDNA species encoding plastid RNA polymerase sigma factors in Arabidopsis thaliana: Evidence for the sigma factor heterogeneity in higher plant plastids
    • Tanaka,K., Tozawa,Y., Mochizuki,N., Shinozaki,K., Nagatani,A., Wakasa,K. and Takahashi,H. (1997) Characterization of three cDNA species encoding plastid RNA polymerase sigma factors in Arabidopsis thaliana: evidence for the sigma factor heterogeneity in higher plant plastids. FEBS Lett., 413, 309-313.
    • (1997) FEBS Lett. , vol.413 , pp. 309-313
    • Tanaka, K.1    Tozawa, Y.2    Mochizuki, N.3    Shinozaki, K.4    Nagatani, A.5    Wakasa, K.6    Takahashi, H.7
  • 14
    • 0034623377 scopus 로고    scopus 로고
    • Three new nuclear genes, sigD, sigE and sigF, encoding putative plastid RNA polymerase sigma factors in Arabidopsis thaliana
    • Fujiwara,M., Nagashima,A., Kanamaru,K., Tanaka,K. and Takahashi,H. (2000) Three new nuclear genes, sigD, sigE and sigF, encoding putative plastid RNA polymerase sigma factors in Arabidopsis thaliana. FEBS Lett., 481, 47-52.
    • (2000) FEBS Lett. , vol.481 , pp. 47-52
    • Fujiwara, M.1    Nagashima, A.2    Kanamaru, K.3    Tanaka, K.4    Takahashi, H.5
  • 15
    • 0034739810 scopus 로고    scopus 로고
    • Characterization of two plastid sigma factors, SigA1 and SigA2, that mainly function in matured chloroplasts in Nicotiana tabacum
    • Oikawa,K., Fujiwara,M., Nakazato,E., Tanaka,K. and Takahashi,H. (2000) Characterization of two plastid sigma factors, SigA1 and SigA2, that mainly function in matured chloroplasts in Nicotiana tabacum. Gene, 261, 221-228.
    • (2000) Gene , vol.261 , pp. 221-228
    • Oikawa, K.1    Fujiwara, M.2    Nakazato, E.3    Tanaka, K.4    Takahashi, H.5
  • 16
    • 0032518161 scopus 로고    scopus 로고
    • Nuclear encoding of a plastid sigma factor in rice and its tissue- and light-dependent expression
    • Tozawa,Y., Tanaka,K., Takahashi,H. and Wakasa,K. (1998) Nuclear encoding of a plastid sigma factor in rice and its tissue- and light-dependent expression. Nucleic Acids Res., 26, 415-419.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 415-419
    • Tozawa, Y.1    Tanaka, K.2    Takahashi, H.3    Wakasa, K.4
  • 21
    • 34249974855 scopus 로고
    • Initiation and processing of atp6, T-urf13 and ORF221 transcripts from mitochondria of T cytoplasm maize
    • Kennell,J.C. and Pring,D.R. (1989) Initiation and processing of atp6, T-urf13 and ORF221 transcripts from mitochondria of T cytoplasm maize. Mol. Gen. Genet., 216, 16-24.
    • (1989) Mol. Gen. Genet. , vol.216 , pp. 16-24
    • Kennell, J.C.1    Pring, D.R.2
  • 22
    • 0026860155 scopus 로고
    • Combination of in vitro capping and ribonuclease protection improves the detection of transcription start sites in chloroplasts
    • Vera,A. and Sugiura,M. (1992) Combination of in vitro capping and ribonuclease protection improves the detection of transcription start sites in chloroplasts. Plant Mol. Biol., 19, 309-311.
    • (1992) Plant Mol. Biol. , vol.19 , pp. 309-311
    • Vera, A.1    Sugiura, M.2
  • 23
    • 0025778597 scopus 로고
    • Bipartite functional map of the E. coli RNA polymerase alpha subunit: Involvement of the C-terminal region in transcription activation by cAMP-CRP
    • Igarashi,K. and Ishihama,A. (1991) Bipartite functional map of the E. coli RNA polymerase alpha subunit: involvement of the C-terminal region in transcription activation by cAMP-CRP. Cell, 65, 1015-1022.
    • (1991) Cell , vol.65 , pp. 1015-1022
    • Igarashi, K.1    Ishihama, A.2
  • 24
    • 0031224925 scopus 로고    scopus 로고
    • Structure and blue-light-responsive transcription of a chloroplast psbD promoter from Arabidopsis thaliana
    • Hoffer,P.H. and Christopher,D.A. (1997) Structure and blue-light-responsive transcription of a chloroplast psbD promoter from Arabidopsis thaliana. Plant Physiol., 115, 213-222.
    • (1997) Plant Physiol. , vol.115 , pp. 213-222
    • Hoffer, P.H.1    Christopher, D.A.2
  • 25
    • 0029156839 scopus 로고
    • Identification and characterization of the Arabidopsis thaliana chloroplast DNA region containing the genes psbA, trnH and rps19
    • Liere,K., Kestermann,M., Muller,U. and Link,G. (1995) Identification and characterization of the Arabidopsis thaliana chloroplast DNA region containing the genes psbA, trnH and rps19. Curr. Genet., 28, 128-130.
    • (1995) Curr. Genet. , vol.28 , pp. 128-130
    • Liere, K.1    Kestermann, M.2    Muller, U.3    Link, G.4
  • 26
    • 0032103982 scopus 로고    scopus 로고
    • Sequence and expression characteristics of a nuclear-encoded chloroplast sigma factor from mustard (Sinapis alba)
    • Kestermann,M., Neukirchen,S., Kloppstech,K. and Link,G. (1998) Sequence and expression characteristics of a nuclear-encoded chloroplast sigma factor from mustard (Sinapis alba). Nucleic Acids Res., 26, 2747-2753.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 2747-2753
    • Kestermann, M.1    Neukirchen, S.2    Kloppstech, K.3    Link, G.4
  • 27
    • 0037353231 scopus 로고    scopus 로고
    • DNA-binding and transcription characteristics of three cloned sigma factors from mustard (Sinapis alba L.) suggest overlapping and distinct roles in plastid gene expression
    • Homann,A. and Link,G. (2003) DNA-binding and transcription characteristics of three cloned sigma factors from mustard (Sinapis alba L.) suggest overlapping and distinct roles in plastid gene expression. Eur. J. Biochem., 270, 1288-1300.
    • (2003) Eur. J. Biochem. , vol.270 , pp. 1288-1300
    • Homann, A.1    Link, G.2
  • 28
    • 0026612797 scopus 로고
    • The sigma 70 family: Sequence conservation and evolutionary relationships
    • Lonetto,M., Gribskov,M. and Gross,C.A. (1992) The sigma 70 family: sequence conservation and evolutionary relationships. J. Bacteriol., 174, 3843-3849.
    • (1992) J. Bacteriol. , vol.174 , pp. 3843-3849
    • Lonetto, M.1    Gribskov, M.2    Gross, C.A.3
  • 30
    • 0032053574 scopus 로고    scopus 로고
    • DET1 represses a chloroplast blue light-responsive promoter in a developmental and tissue-specific manner in Arabidopsis thaliana
    • Christopher,D.A. and Hoffer,P.H. (1998) DET1 represses a chloroplast blue light-responsive promoter in a developmental and tissue-specific manner in Arabidopsis thaliana. Plant J., 14, 1-11.
    • (1998) Plant J. , vol.14 , pp. 1-11
    • Christopher, D.A.1    Hoffer, P.H.2
  • 31
    • 0035542782 scopus 로고    scopus 로고
    • Cryptochrome 1, cryptochrome 2, and phytochrome A co-activate the chloroplast psbD blue light-responsive promoter
    • Thum,K.E., Kim,M., Christopher,D.A. and Mullet,J.E. (2001) Cryptochrome 1, cryptochrome 2, and phytochrome A co-activate the chloroplast psbD blue light-responsive promoter. Plant Cell, 13, 2747-2760.
    • (2001) Plant Cell , vol.13 , pp. 2747-2760
    • Thum, K.E.1    Kim, M.2    Christopher, D.A.3    Mullet, J.E.4
  • 32
    • 0035112410 scopus 로고    scopus 로고
    • Involvement of a nuclear-encoded basic helix-loop-helix protein in transcription of the light-responsive promoter of psbD
    • Baba,K., Nakano,T., Yamagishi,K. and Yoshida,S. (2001) Involvement of a nuclear-encoded basic helix-loop-helix protein in transcription of the light-responsive promoter of psbD. Plant Physiol., 125, 595-603.
    • (2001) Plant Physiol. , vol.125 , pp. 595-603
    • Baba, K.1    Nakano, T.2    Yamagishi, K.3    Yoshida, S.4
  • 33
    • 0037051904 scopus 로고    scopus 로고
    • Blue light specific and differential expression of a plastid sigma factor, Sig5 in Arabidopsis thaliana
    • Tsunoyama,Y., Morikawa,K., Shiina,T. and Toyoshima,Y. (2002) Blue light specific and differential expression of a plastid sigma factor, Sig5 in Arabidopsis thaliana. FEBS Lett., 516, 225-228.
    • (2002) FEBS Lett. , vol.516 , pp. 225-228
    • Tsunoyama, Y.1    Morikawa, K.2    Shiina, T.3    Toyoshima, Y.4
  • 34
    • 0033941145 scopus 로고    scopus 로고
    • Complementary expression of two plastid-localized sigma-like factors in maize
    • Lahiri,S.D. and Allison,L.A. (2000) Complementary expression of two plastid-localized sigma-like factors in maize. Plant Physiol., 123, 883-894.
    • (2000) Plant Physiol. , vol.123 , pp. 883-894
    • Lahiri, S.D.1    Allison, L.A.2
  • 35
    • 0021784005 scopus 로고
    • In vitro synthesis and processing of a maize chloroplast transcript encoded by the ribulose 1,5-bisphosphate carboxylase large subunit gene
    • Hanley-Bowdoin,L., Orozco,E.M. and Chua,N.-H. (1985) In vitro synthesis and processing of a maize chloroplast transcript encoded by the ribulose 1,5-bisphosphate carboxylase large subunit gene. Mol. Cell. Biol., 5, 2733-2745.
    • (1985) Mol. Cell. Biol. , vol.5 , pp. 2733-2745
    • Hanley-Bowdoin, L.1    Orozco, E.M.2    Chua, N.-H.3
  • 36
    • 51249177648 scopus 로고
    • Multiple transcripts for higher plant rbcL and atpB genes and localization of the transcription initiation sites of the rbcL gene
    • Mullet,J.E., Orozco,E.M. and Chua,N.-H. (1985) Multiple transcripts for higher plant rbcL and atpB genes and localization of the transcription initiation sites of the rbcL gene. Plant Mol. Biol., 4, 39-54.
    • (1985) Plant Mol. Biol. , vol.4 , pp. 39-54
    • Mullet, J.E.1    Orozco, E.M.2    Chua, N.-H.3
  • 37
    • 0027538631 scopus 로고
    • A methyl jasmonate-induced shift in the length of the 5′ untranslated region impairs translation of the plastid rbcL transcript in barley
    • Reinbothe,S., Reinbothe,C., Heintzen,C., Seidenbecher,C. and Parthier,B. (1993) A methyl jasmonate-induced shift in the length of the 5′ untranslated region impairs translation of the plastid rbcL transcript in barley. EMBO J., 12, 1505-1512.
    • (1993) EMBO J. , vol.12 , pp. 1505-1512
    • Reinbothe, S.1    Reinbothe, C.2    Heintzen, C.3    Seidenbecher, C.4    Parthier, B.5
  • 38
    • 0034737768 scopus 로고    scopus 로고
    • Evolutionary conservation of C-terminal domains of primary sigma(70)-type transcription factors between plants and bacteria
    • Hakimi,M.A., Privat,I., Valay,J.G. and Lerbs-Mache,S. (2000) Evolutionary conservation of C-terminal domains of primary sigma(70)-type transcription factors between plants and bacteria. J. Biol. Chem., 275, 9215-9221.
    • (2000) J. Biol. Chem. , vol.275 , pp. 9215-9221
    • Hakimi, M.A.1    Privat, I.2    Valay, J.G.3    Lerbs-Mache, S.4
  • 39
    • 0033615372 scopus 로고    scopus 로고
    • Complete structure of the chloroplast genome of Arabidopsis thaliana
    • Sato,S., Nakamura,Y., Kaneko,T., Asamizu,E. and Tabata,S. (1999) Complete structure of the chloroplast genome of Arabidopsis thaliana. DNA Res., 6, 283-290.
    • (1999) DNA Res. , vol.6 , pp. 283-290
    • Sato, S.1    Nakamura, Y.2    Kaneko, T.3    Asamizu, E.4    Tabata, S.5
  • 40
    • 0022431883 scopus 로고
    • Structure and cotranscription of tobacco chloroplast genes for tRNAGlu(UUC), tRNATyr(GUA) and tRNAAsp(GUC)
    • Ohme,M., Kamogashira,T., Shinozaki,K. and Sugiura,M. (1985) Structure and cotranscription of tobacco chloroplast genes for tRNAGlu(UUC), tRNATyr(GUA) and tRNAAsp(GUC). Nucleic Acids Res., 13, 1045-1056.
    • (1985) Nucleic Acids Res. , vol.13 , pp. 1045-1056
    • Ohme, M.1    Kamogashira, T.2    Shinozaki, K.3    Sugiura, M.4
  • 41
    • 0024100447 scopus 로고
    • Cotranscription of the genes encoding two P700 chlorophyll a apoproteins with the gene for ribosomal protein CS14: Determination of the transcriptional initiation site by in vitro capping
    • Meng,B.Y., Tanaka,M., Wakasugi,T., Ohme,M., Shinozaki,K. and Sugiura,M. (1988) Cotranscription of the genes encoding two P700 chlorophyll a apoproteins with the gene for ribosomal protein CS14: determination of the transcriptional initiation site by in vitro capping. Curr. Genet., 14, 395-400.
    • (1988) Curr. Genet. , vol.14 , pp. 395-400
    • Meng, B.Y.1    Tanaka, M.2    Wakasugi, T.3    Ohme, M.4    Shinozaki, K.5    Sugiura, M.6
  • 42
    • 0023051874 scopus 로고
    • The RNA required in the first step of chlorophyll biosynthesis is a chloroplast glutamate tRNA
    • Schon,A., Krupp,G., Gough,S., Berry-Lowe,S., Kannangara,C.G. and Soll,D. (1986) The RNA required in the first step of chlorophyll biosynthesis is a chloroplast glutamate tRNA. Nature, 322, 281-284.
    • (1986) Nature , vol.322 , pp. 281-284
    • Schon, A.1    Krupp, G.2    Gough, S.3    Berry-Lowe, S.4    Kannangara, C.G.5    Soll, D.6
  • 43
    • 0026686195 scopus 로고
    • Glutamyl-transfer RNA: A precursor of heme and chlorophyll biosynthesis
    • Jahn,D., Verkamp,E. and Soll,D. (1992) Glutamyl-transfer RNA: a precursor of heme and chlorophyll biosynthesis. Trends Biochem. Sci., 17, 215-218.
    • (1992) Trends Biochem. Sci. , vol.17 , pp. 215-218
    • Jahn, D.1    Verkamp, E.2    Soll, D.3


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