메뉴 건너뛰기




Volumn 124, Issue 2, 2011, Pages 228-239

Stress-specific composition, assembly and kinetics of stress granules in Saccharomyces cerevisiae

Author keywords

mRNA; P bodies; Stress granules; Translation

Indexed keywords

HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN; HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN HRP1; INITIATION FACTOR; INITIATION FACTOR 1A; INITIATION FACTOR 3; INITIATION FACTOR 4A; INITIATION FACTOR 4B; INITIATION FACTOR 5B; MESSENGER RIBONUCLEOPROTEIN; RIBONUCLEOPROTEIN; SODIUM AZIDE; UNCLASSIFIED DRUG;

EID: 79251554956     PISSN: 00219533     EISSN: 14779137     Source Type: Journal    
DOI: 10.1242/jcs.078444     Document Type: Article
Times cited : (197)

References (38)
  • 1
    • 66249103703 scopus 로고    scopus 로고
    • RNA granules: Post-transcriptional and epigenetic modulators of gene expression
    • Anderson, P. and Kedersha, N. (2009). RNA granules: post-transcriptional and epigenetic modulators of gene expression. Nat. Rev. Mol. Cell Biol. 10, 430-436.
    • (2009) Nat. Rev. Mol. Cell Biol. , vol.10 , pp. 430-436
    • Anderson, P.1    Kedersha, N.2
  • 2
    • 34347387606 scopus 로고    scopus 로고
    • Accumulation of polyadenylated mRNA, Pab1p, eIF4E, and eIF4G with P-bodies in Saccharomyces cerevisiae
    • Brengues, M. and Parker, R. (2007). Accumulation of polyadenylated mRNA, Pab1p, eIF4E, and eIF4G with P-bodies in Saccharomyces cerevisiae. Mol. Biol. Cell 18, 2592-2602.
    • (2007) Mol. Biol. Cell , vol.18 , pp. 2592-2602
    • Brengues, M.1    Parker, R.2
  • 3
    • 27144515901 scopus 로고    scopus 로고
    • Cell biology: Movement of eukaryotic mRNAs between polysomes and cytoplasmic processing bodies
    • DOI 10.1126/science.1115791
    • Brengues, M., Teixeira, D. and Parker, R. (2005). Movement of eukaryotic mRNAs between polysomes and cytoplasmic processing bodies. Science 310, 486-489. (Pubitemid 41507961)
    • (2005) Science , vol.310 , Issue.5747 , pp. 486-489
    • Brengues, M.1    Teixeira, D.2    Parker, R.3
  • 4
    • 72149095755 scopus 로고    scopus 로고
    • Eukaryotic stress granules: The ins and outs of translation
    • Buchan, J. R. and Parker, R. (2009). Eukaryotic stress granules: the ins and outs of translation. Mol. Cell 36, 932-941.
    • (2009) Mol. Cell , vol.36 , pp. 932-941
    • Buchan, J.R.1    Parker, R.2
  • 5
    • 56149086182 scopus 로고    scopus 로고
    • P bodies promote stress granule assembly in Saccharomyces cerevisiae
    • Buchan, J. R., Muhlrad, D. and Parker, R. (2008). P bodies promote stress granule assembly in Saccharomyces cerevisiae. J. Cell Biol. 183, 441-455.
    • (2008) J. Cell Biol. , vol.183 , pp. 441-455
    • Buchan, J.R.1    Muhlrad, D.2    Parker, R.3
  • 6
    • 25144482816 scopus 로고    scopus 로고
    • General translational repression by activators of mRNA decapping
    • Coller, J. and Parker, R. (2005). General translational repression by activators of mRNA decapping. Cell 122, 875-886.
    • (2005) Cell , vol.122 , pp. 875-886
    • Coller, J.1    Parker, R.2
  • 8
    • 35948951960 scopus 로고    scopus 로고
    • Edc3p and a glutamine/asparaginerich domain of Lsm4p function in processing body assembly in Saccharomyces cerevisiae
    • Decker, C. J., Teixeira, D. and Parker, R. (2007). Edc3p and a glutamine/asparaginerich domain of Lsm4p function in processing body assembly in Saccharomyces cerevisiae. J. Cell Biol. 179, 437-449.
    • (2007) J. Cell Biol. , vol.179 , pp. 437-449
    • Decker, C.J.1    Teixeira, D.2    Parker, R.3
  • 9
    • 0026556814 scopus 로고
    • Phosphorylation of initiation factor 2 alpha by protein kinase GCN2 mediates gene-specific translational control of GCN4 in yeast
    • Dever, T. E., Feng, L., Wek, R. C., Cigan, A. M., Donahue, T. F. and Hinnebusch, A. G. (1992). Phosphorylation of initiation factor 2 alpha by protein kinase GCN2 mediates gene-specific translational control of GCN4 in yeast. Cell 68, 585-596.
    • (1992) Cell , vol.68 , pp. 585-596
    • Dever, T.E.1    Feng, L.2    Wek, R.C.3    Cigan, A.M.4    Donahue, T.F.5    Hinnebusch, A.G.6
  • 10
    • 0033578620 scopus 로고    scopus 로고
    • Interaction of translation initiation factor eIF4G with eIF4A in the yeast Saccharomyces cerevisiae
    • Dominguez, D., Altmann, M., Benz, J., Baumann, U. and Trachsel, H. (1999). Interaction of translation initiation factor eIF4G with eIF4A in the yeast Saccharomyces cerevisiae. J. Biol. Chem. 274, 26720-26726.
    • (1999) J. Biol. Chem. , vol.274 , pp. 26720-26726
    • Dominguez, D.1    Altmann, M.2    Benz, J.3    Baumann, U.4    Trachsel, H.5
  • 11
    • 0035310917 scopus 로고    scopus 로고
    • Structural and functional similarities between the central eukaryotic initiation factor (eIF)4A-binding domain of mammalian eIF4G and the eIF4A-binding domain of yeast eIF4G
    • Dominguez, D., Kislig, E., Altmann, M. and Trachsel, H. (2001). Structural and functional similarities between the central eukaryotic initiation factor (eIF)4A-binding domain of mammalian eIF4G and the eIF4A-binding domain of yeast eIF4G. Biochem. J. 355, 223-230.
    • (2001) Biochem. J. , vol.355 , pp. 223-230
    • Dominguez, D.1    Kislig, E.2    Altmann, M.3    Trachsel, H.4
  • 12
    • 0014027366 scopus 로고
    • Electron transport systems of yeast. 3. Preparation and properties of cytochrome oxidase
    • Duncan, H. M. and Mackler, B. (1966). Electron transport systems of yeast. 3. Preparation and properties of cytochrome oxidase. J. Biol.. Chem. 241, 1694-1697.
    • (1966) J. Biol.. Chem. , vol.241 , pp. 1694-1697
    • Duncan, H.M.1    Mackler, B.2
  • 13
    • 0030739963 scopus 로고    scopus 로고
    • Mitochondrial function is required for resistance to oxidative stress in the yeast Saccharomyces cerevisiae
    • Grant, C. M., MacIver, F. H. and Dawes, I. W. (1997). Mitochondrial function is required for resistance to oxidative stress in the yeast Saccharomyces cerevisiae. FEBS Lett. 410, 219-222.
    • (1997) FEBS Lett. , vol.410 , pp. 219-222
    • Grant, C.M.1    MacIver, F.H.2    Dawes, I.W.3
  • 14
    • 68949172267 scopus 로고    scopus 로고
    • Robust heat shock induces eIF2alpha-phosphorylation-independent assembly of stress granules containing eIF3 and 40S ribosomal subunits in budding yeast, Saccharomyces cerevisiae
    • Grousl, T., Ivanov, P., Frydlova, I., Vasicova, P., Janda, F., Vojtova, J., Malinska, K., Malcova, I., Novakova, L., Janoskova, D. et al. (2009). Robust heat shock induces eIF2alpha-phosphorylation-independent assembly of stress granules containing eIF3 and 40S ribosomal subunits in budding yeast, Saccharomyces cerevisiae. J. Cell Sci. 122, 2078-2088.
    • (2009) J. Cell Sci. , vol.122 , pp. 2078-2088
    • Grousl, T.1    Ivanov, P.2    Frydlova, I.3    Vasicova, P.4    Janda, F.5    Vojtova, J.6    Malinska, K.7    Malcova, I.8    Novakova, L.9    Janoskova, D.10
  • 15
    • 33749244908 scopus 로고    scopus 로고
    • Translation-independent inhibition of mRNA deadenylation during stress in Saccharomyces cerevisiae
    • Hilgers, V., Teixeira, D. and Parker, R. (2006). Translation-independent inhibition of mRNA deadenylation during stress in Saccharomyces cerevisiae. RNA 12, 1835-1845.
    • (2006) RNA , vol.12 , pp. 1835-1845
    • Hilgers, V.1    Teixeira, D.2    Parker, R.3
  • 16
    • 35348989809 scopus 로고    scopus 로고
    • Stress-dependent relocalization of translationally primed mRNPs to cytoplasmic granules that are kinetically and spatially distinct from P-bodies
    • Hoyle, N. P., Castelli, L. M., Campbell, S. G., Holmes, L. E. and Ashe, M. P. (2007). Stress-dependent relocalization of translationally primed mRNPs to cytoplasmic granules that are kinetically and spatially distinct from P-bodies. J. Cell Biol. 179, 65-74.
    • (2007) J. Cell Biol. , vol.179 , pp. 65-74
    • Hoyle, N.P.1    Castelli, L.M.2    Campbell, S.G.3    Holmes, L.E.4    Ashe, M.P.5
  • 18
    • 0015185533 scopus 로고
    • Uptake of amino acids by actidione-treated yeast cells. II. Effect of incubation conditions and metabolic inhibitors
    • Kotyk, A., Rihova, L. and Ponec, M. (1971). Uptake of amino acids by actidione-treated yeast cells. II. Effect of incubation conditions and metabolic inhibitors. Folia Microbiol. (Praha) 16, 445-450.
    • (1971) Folia Microbiol. (Praha) , vol.16 , pp. 445-450
    • Kotyk, A.1    Rihova, L.2    Ponec, M.3
  • 19
    • 10044290801 scopus 로고    scopus 로고
    • FAST is a survival protein that senses mitochondrial stress and modulates TIA-1-regulated changes in protein expression
    • Li, W., Simarro, M., Kedersha, N. and Anderson, P. (2004). FAST is a survival protein that senses mitochondrial stress and modulates TIA-1-regulated changes in protein expression. Mol. Cell. Biol. 24, 10718-10732.
    • (2004) Mol. Cell. Biol. , vol.24 , pp. 10718-10732
    • Li, W.1    Simarro, M.2    Kedersha, N.3    Anderson, P.4
  • 20
    • 33749493493 scopus 로고    scopus 로고
    • Inhibition of ribosome recruitment induces stress granule formation independently of eukaryotic initiation factor 2alpha phosphorylation
    • Mazroui, R., Sukarieh, R., Bordeleau, M. E., Kaufman, R. J., Northcote, P., Tanaka, J., Gallouzi, I. and Pelletier, J. (2006). Inhibition of ribosome recruitment induces stress granule formation independently of eukaryotic initiation factor 2alpha phosphorylation. Mol. Biol. Cell 17, 4212-4219.
    • (2006) Mol. Biol. Cell , vol.17 , pp. 4212-4219
    • Mazroui, R.1    Sukarieh, R.2    Bordeleau, M.E.3    Kaufman, R.J.4    Northcote, P.5    Tanaka, J.6    Gallouzi, I.7    Pelletier, J.8
  • 22
    • 57349158716 scopus 로고    scopus 로고
    • Translationally repressed mRNA transiently cycles through stress granules during stress
    • Mollet, S., Cougot, N., Wilczynska, A., Dautry, F., Kress, M., Bertrand, E. and Weil, D. (2008). Translationally repressed mRNA transiently cycles through stress granules during stress. Mol. Biol. Cell 19, 4469-4479.
    • (2008) Mol. Biol. Cell , vol.19 , pp. 4469-4479
    • Mollet, S.1    Cougot, N.2    Wilczynska, A.3    Dautry, F.4    Kress, M.5    Bertrand, E.6    Weil, D.7
  • 23
    • 53349165578 scopus 로고    scopus 로고
    • A functional RNAi screen links O-GlcNAc modification of ribosomal proteins to stress granule and processing body assembly
    • Ohn, T., Kedersha, N., Hickman, T., Tisdale, S. and Anderson, P. (2008). A functional RNAi screen links O-GlcNAc modification of ribosomal proteins to stress granule and processing body assembly. Nat. Cell Biol. 10, 1224-1231.
    • (2008) Nat. Cell Biol. , vol.10 , pp. 1224-1231
    • Ohn, T.1    Kedersha, N.2    Hickman, T.3    Tisdale, S.4    Anderson, P.5
  • 24
    • 33847417585 scopus 로고    scopus 로고
    • P bodies and the control of mRNA translation and degradation
    • Parker, R. and Sheth, U. (2007). P bodies and the control of mRNA translation and degradation. Mol. Cell 25, 635-646.
    • (2007) Mol. Cell , vol.25 , pp. 635-646
    • Parker, R.1    Sheth, U.2
  • 25
    • 0032545759 scopus 로고    scopus 로고
    • Clotrimazole and bifonazole detach hexokinase from mitochondria of melanoma cells
    • Penso, J. and Beitner, R. (1998). Clotrimazole and bifonazole detach hexokinase from mitochondria of melanoma cells. Eur. J. Pharmacol. 342, 113-117.
    • (1998) Eur. J. Pharmacol. , vol.342 , pp. 113-117
    • Penso, J.1    Beitner, R.2
  • 26
    • 0035345333 scopus 로고    scopus 로고
    • Effect of sodium azide on heat-shock resistance in Saccharomyces cerevisiae and Debaryomyces vanriji yeasts
    • Rikhvanov, E. G., Varakina, N. N., Rusaleva, T. M., Rachenko, E. I., Kiseleva, V. A. and Voinikov, V. K. (2001). Effect of sodium azide on heat-shock resistance in Saccharomyces cerevisiae and Debaryomyces vanriji yeasts. Mikrobiologiia 70, 300-304.
    • (2001) Mikrobiologiia , vol.70 , pp. 300-304
    • Rikhvanov, E.G.1    Varakina, N.N.2    Rusaleva, T.M.3    Rachenko, E.I.4    Kiseleva, V.A.5    Voinikov, V.K.6
  • 28
    • 55749110920 scopus 로고    scopus 로고
    • Synthetic genetic array analysis in Saccharomyces cerevisiae provides evidence for an interaction between RAT8/DBP5 and genes encoding P-body components
    • Scarcelli, J. J., Viggiano, S., Hodge, C. A., Heath, C. V., Amberg, D. C. and Cole, C. N. (2008). Synthetic genetic array analysis in Saccharomyces cerevisiae provides evidence for an interaction between RAT8/DBP5 and genes encoding P-body components. Genetics 179, 1945-1955.
    • (2008) Genetics , vol.179 , pp. 1945-1955
    • Scarcelli, J.J.1    Viggiano, S.2    Hodge, C.A.3    Heath, C.V.4    Amberg, D.C.5    Cole, C.N.6
  • 30
    • 0021808048 scopus 로고
    • The interaction of representative members from two classes of antimycotics-the azoles and the allylamines-with cytochromes P-450 in steroidogenic tissues and liver
    • Schuster, I. (1985). The interaction of representative members from two classes of antimycotics-the azoles and the allylamines-with cytochromes P-450 in steroidogenic tissues and liver. Xenobiotica 15, 529-546.
    • (1985) Xenobiotica , vol.15 , pp. 529-546
    • Schuster, I.1
  • 31
    • 0032778953 scopus 로고    scopus 로고
    • Mutations in translation initiation factors lead to increased rates of deadenylation and decapping of mRNAs in Saccharomyces cerevisiae
    • Schwartz, D. C. and Parker, R. (1999). Mutations in translation initiation factors lead to increased rates of deadenylation and decapping of mRNAs in Saccharomyces cerevisiae. Mol. Cell. Biol. 19, 5247-5256.
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 5247-5256
    • Schwartz, D.C.1    Parker, R.2
  • 32
    • 0033773044 scopus 로고    scopus 로고
    • mRNA decapping in yeast requires dissociation of the cap binding protein, eukaryotic translation initiation factor 4E
    • Schwartz, D. C. and Parker, R. (2000). mRNA decapping in yeast requires dissociation of the cap binding protein, eukaryotic translation initiation factor 4E. Mol. Cell. Biol. 20, 7933-7942.
    • (2000) Mol. Cell. Biol. , vol.20 , pp. 7933-7942
    • Schwartz, D.C.1    Parker, R.2
  • 33
    • 34547860022 scopus 로고    scopus 로고
    • GW body disassembly triggered by siRNAs independently of their silencing activity
    • Serman, A., Le Roy, F., Aigueperse, C., Kress, M., Dautry, F. and Weil, D. (2007). GW body disassembly triggered by siRNAs independently of their silencing activity. Nucleic Acids Res. 35, 4715-4727.
    • (2007) Nucleic Acids Res. , vol.35 , pp. 4715-4727
    • Serman, A.1    Le Roy, F.2    Aigueperse, C.3    Kress, M.4    Dautry, F.5    Weil, D.6
  • 34
    • 0037968357 scopus 로고    scopus 로고
    • Decapping and decay of messenger RNA occur in cytoplasmic processing bodies
    • Sheth, U. and Parker, R. (2003). Decapping and decay of messenger RNA occur in cytoplasmic processing bodies. Science 300, 805-808.
    • (2003) Science , vol.300 , pp. 805-808
    • Sheth, U.1    Parker, R.2
  • 35
    • 60149091189 scopus 로고    scopus 로고
    • Regulation of translation initiation in eukaryotes: Mechanisms and biological targets
    • Sonenberg, N. and Hinnebusch, A. G. (2009). Regulation of translation initiation in eukaryotes: mechanisms and biological targets. Cell 136, 731-745.
    • (2009) Cell , vol.136 , pp. 731-745
    • Sonenberg, N.1    Hinnebusch, A.G.2
  • 36
    • 15444379718 scopus 로고    scopus 로고
    • Processing bodies require RNA for assembly and contain nontranslating mRNAs
    • Teixeira, D., Sheth, U., Valencia-Sanchez, M. A., Brengues, M. and Parker, R. (2005). Processing bodies require RNA for assembly and contain nontranslating mRNAs. RNA 11, 371-382.
    • (2005) RNA , vol.11 , pp. 371-382
    • Teixeira, D.1    Sheth, U.2    Valencia-Sanchez, M.A.3    Brengues, M.4    Parker, R.5
  • 37
    • 0014196751 scopus 로고
    • Azide inhibition of mitochondrial electron transport. I. The aerobic steady state of succinate oxidation
    • Wilson, D. F. and Chance, B. (1967). Azide inhibition of mitochondrial electron transport. I. The aerobic steady state of succinate oxidation. Biochim. Biophys. Acta 131, 421-430.
    • (1967) Biochim. Biophys. Acta , vol.131 , pp. 421-430
    • Wilson, D.F.1    Chance, B.2
  • 38
    • 41749089797 scopus 로고    scopus 로고
    • Reprogramming mRNA translation during stress
    • Yamasaki, S. and Anderson, P. (2008). Reprogramming mRNA translation during stress. Curr. Opin. Cell Biol. 20, 222-226.
    • (2008) Curr. Opin. Cell Biol. , vol.20 , pp. 222-226
    • Yamasaki, S.1    Anderson, P.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.