-
1
-
-
34548267265
-
Systematic analysis of longitudinal serological responses of pigs infected experimentally with African swine fever virus
-
Reis AL, Parkhouse RME, Penedos AR, Martins C, Leitão A (2007) Systematic analysis of longitudinal serological responses of pigs infected experimentally with African swine fever virus. J Gen Virol 88:2426-2434.
-
(2007)
J Gen Virol
, vol.88
, pp. 2426-2434
-
-
Reis, A.L.1
Parkhouse, R.M.E.2
Penedos, A.R.3
Martins, C.4
Leitão, A.5
-
2
-
-
2942718878
-
African swine fever virus proteins involved in evading host defence systems
-
Dixon LK, Abrams CC, Bowick G, Goatley LC, Kay-Jackson PC, Chapman D, Liverani E, Nix R, Silk R, Zhang F (2004) African swine fever virus proteins involved in evading host defence systems. Vet Immunol Immunopathol 100:117-134.
-
(2004)
Vet Immunol Immunopathol
, vol.100
, pp. 117-134
-
-
Dixon, L.K.1
Abrams, C.C.2
Bowick, G.3
Goatley, L.C.4
Kay-Jackson, P.C.5
Chapman, D.6
Liverani, E.7
Nix, R.8
Silk, R.9
Zhang, F.10
-
3
-
-
0037320451
-
TICAM-1, an adaptor molecule that participates in Toll-like receptor 3-mediated interferon-beta induction
-
DOI 10.1038/ni886
-
Oshiumi H, Matsumoto M, Funami K, Akazawa T, Seya T (2003) Ticam-1, an adaptor molecule that participates in toll-like receptor 3-mediated interferon-beta induction. Nat Immunol 4:161-167. (Pubitemid 36193018)
-
(2003)
Nature Immunology
, vol.4
, Issue.2
, pp. 161-167
-
-
Oshiumi, H.1
Matsumoto, M.2
Funami, K.3
Akazawa, T.4
Seya, T.5
-
4
-
-
38549138306
-
Sensing of viral infection and activation of innate immunity by toll-like receptor 3
-
Vercammen E, Staal J, Beyaert R (2008) Sensing of viral infection and activation of innate immunity by toll-like receptor 3. Clin Microbiol Rev 21:13-25.
-
(2008)
Clin Microbiol Rev
, vol.21
, pp. 13-25
-
-
Vercammen, E.1
Staal, J.2
Beyaert, R.3
-
5
-
-
42349090335
-
Structural basis of toll-like receptor 3 signaling with double-stranded RNA
-
Liu L, Botos I, Wang Y, Leonard JN, Shiloach J, Segal DM, Davies DR (2008) Structural basis of toll-like receptor 3 signaling with double-stranded RNA. Science 320:379-381.
-
(2008)
Science
, vol.320
, pp. 379-381
-
-
Liu, L.1
Botos, I.2
Wang, Y.3
Leonard, J.N.4
Shiloach, J.5
Segal, D.M.6
Davies, D.R.7
-
6
-
-
40749097627
-
A dimer of the toll-like receptor 4 cytoplasmic domain provides a specific scaffold for the recruitment of signaling adaptor proteins
-
Nũnez Miguel RN, Wong J, Westoll JF, Brooks HJ, O'Neill LAJ, Gay NJ, Bryant CE, Monie TP (2009) A dimer of the toll-like receptor 4 cytoplasmic domain provides a specific scaffold for the recruitment of signaling adaptor proteins. PLoS ONE 2:e788.
-
(2009)
PLoS ONE
, vol.2
-
-
Nũnez Miguel, R.N.1
Wong, J.2
Westoll, J.F.3
Brooks, H.J.4
O'Neill, L.A.J.5
Gay, N.J.6
Bryant, C.E.7
Monie, T.P.8
-
7
-
-
0038325765
-
Structure of the Nogo receptor ectodomain: A recognition module implicated in myelin inhibition
-
He X, Bazan J, McDermott G, Park J, Wang K, Tessier-Lavigne M, He Z, Garcia K (2003) Structure of the Nogo receptor ectodomain: a recognition module implicated in myelin inhibition. Neuron 38:177-185.
-
(2003)
Neuron
, vol.38
, pp. 177-185
-
-
He, X.1
Bazan, J.2
McDermott, G.3
Park, J.4
Wang, K.5
Tessier-Lavigne, M.6
He, Z.7
Garcia, K.8
-
9
-
-
0034597766
-
Structural basis for signal transduction by the toll/interleukin-1 receptor domains
-
Xu Y, Tao X, Shen B, Horng T, Medzhitov R, Manley JL, Tong L (2000) Structural basis for signal transduction by the toll/interleukin-1 receptor domains. Nature 408:111-115.
-
(2000)
Nature
, vol.408
, pp. 111-115
-
-
Xu, Y.1
Tao, X.2
Shen, B.3
Horng, T.4
Medzhitov, R.5
Manley, J.L.6
Tong, L.7
-
10
-
-
0036435613
-
An extensively associated dimer in the structure of thec713s mutant of the tir domain of human tlr2
-
Tao X, Xu Y, Zheng Y, Beg AA, Tong L (2002) An extensively associated dimer in the structure of thec713s mutant of the tir domain of human tlr2. Biochem Biophys Res Commun 299:216-221.
-
(2002)
Biochem Biophys Res Commun
, vol.299
, pp. 216-221
-
-
Tao, X.1
Xu, Y.2
Zheng, Y.3
Beg, A.A.4
Tong, L.5
-
11
-
-
45549086115
-
The crystal structure of the human toll-like receptor-10 cytoplasmic domain reveals a putative signaling dimer
-
Nyman T, Stenmark P, Flodin S, Johansson I, Hammarström M (2008) The crystal structure of the human toll-like receptor-10 cytoplasmic domain reveals a putative signaling dimer. J Biol Chem 283:11861-11865.
-
(2008)
J Biol Chem
, vol.283
, pp. 11861-11865
-
-
Nyman, T.1
Stenmark, P.2
Flodin, S.3
Johansson, I.4
Hammarström, M.5
-
12
-
-
39449115394
-
I-tasser server for protein 3D structure prediction
-
Zhang Y (2008) I-tasser server for protein 3D structure prediction. BMC Biol 9:40.
-
(2008)
BMC Biol
, vol.9
, pp. 40
-
-
Zhang, Y.1
-
13
-
-
68849110301
-
NMR assignment of the nonstructural protein nsp3(10661181) from SARS-CoV
-
Serrano P, Johnson MA, Chatterjee A, Pedrini B, Wuthrich K (2008) NMR assignment of the nonstructural protein nsp3(10661181) from SARS-CoV. Biomol NMR Assign 2:135-138.
-
(2008)
Biomol NMR Assign
, vol.2
, pp. 135-138
-
-
Serrano, P.1
Johnson, M.A.2
Chatterjee, A.3
Pedrini, B.4
Wuthrich, K.5
-
14
-
-
0035910270
-
Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
-
Krogh A, Larsson B, von Heijne G, Sonnhammer ELL (2001) Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes. J Mol Biol 305:567-580.
-
(2001)
J Mol Biol
, vol.305
, pp. 567-580
-
-
Krogh, A.1
Larsson, B.2
Von Heijne, G.3
Sonnhammer, E.L.L.4
-
15
-
-
63849246525
-
Protein structure prediction on the web: A case study using the Phyre server
-
Kelley LA, Sternberg MJE (2009) Protein structure prediction on the web: a case study using the Phyre server. Nat Protoc 4:363-371.
-
(2009)
Nat Protoc
, vol.4
, pp. 363-371
-
-
Kelley, L.A.1
Sternberg, M.J.E.2
-
16
-
-
36448991500
-
ClustalW and ClustalX version 2.0
-
Larkin MA, Blackshields G, Brown NP, Chenna R, McGettigan PA, McWilliam H, Valentin F, Wallace IM, Wilm A, Lopez R, Thompson JD, Gibsonand TJ, Higgins DG (2007) ClustalW and ClustalX version 2.0. Bioinformatics 23:2947-2948.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
Blackshields, G.2
Brown, N.P.3
Chenna, R.4
McGettigan, P.A.5
McWilliam, H.6
Valentin, F.7
Wallace, I.M.8
Wilm, A.9
Lopez, R.10
Thompson, J.D.11
Gibsonand, T.J.12
Higgins, D.G.13
-
17
-
-
65449188232
-
Jalview version 2 - A multiple sequence alignment editor and analysis workbench
-
Waterhouse AM, Procter JB, Martin DMA, Clamp M, Barton GJ (2009) Jalview version 2 - a multiple sequence alignment editor and analysis workbench. Bioinformatics 25:1189-1191.
-
(2009)
Bioinformatics
, vol.25
, pp. 1189-1191
-
-
Waterhouse, A.M.1
Procter, J.B.2
Martin, D.M.A.3
Clamp, M.4
Barton, G.J.5
-
18
-
-
38049034590
-
Comparative protein structure modeling using MODELLER
-
Eswar N, Marti-Renom MA, Webb B, Madhusudhan MS, Eramian D, Shen M, Pieper U, Sali A (2006) Comparative protein structure modeling using MODELLER. Curr Protoc Bioinformatics 15:5.6.1-5.6.30.
-
(2006)
Curr Protoc Bioinformatics
, vol.15
-
-
Eswar, N.1
Marti-Renom, M.A.2
Webb, B.3
Madhusudhan, M.S.4
Eramian, D.5
Shen, M.6
Pieper, U.7
Sali, A.8
-
19
-
-
33846036096
-
The worldwide Protein Data Bank (wwPDB): Ensuring a single, uniform archive of PDB data
-
Berman H, Henrick K, Nakamura H, Markley JL (2007) The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data. Nucl Acids Res 35:D301-D303.
-
(2007)
Nucl Acids Res
, vol.35
-
-
Berman, H.1
Henrick, K.2
Nakamura, H.3
Markley, J.L.4
-
20
-
-
0000243829
-
Procheck: A program to check the stereochemical quality of protein structures
-
Laskowski RA, MacArthur MW, Moss DS, Thornton JM (1993) Procheck: a program to check the stereochemical quality of protein structures. J Appl Cryst 26:283-291.
-
(1993)
J Appl Cryst
, vol.26
, pp. 283-291
-
-
Laskowski, R.A.1
MacArthur, M.W.2
Moss, D.S.3
Thornton, J.M.4
-
21
-
-
0042415783
-
Namd2: Greater scalability for parallel molecular dynamics
-
Kale L, Skeel R, Bhandarkar M, Brunner R, Gursoy A, Krawetz N, Phillips J, Shinozaki A, Varadarajan K, Schulten K (1999) Namd2: greater scalability for parallel molecular dynamics. J Comp Phys 151:283-312.
-
(1999)
J Comp Phys
, vol.151
, pp. 283-312
-
-
Kale, L.1
Skeel, R.2
Bhandarkar, M.3
Brunner, R.4
Gursoy, A.5
Krawetz, N.6
Phillips, J.7
Shinozaki, A.8
Varadarajan, K.9
Schulten, K.10
-
22
-
-
0041784950
-
All-atom empirical potential for molecular modeling and dynamics studies of proteins
-
MacKerell AD, Jr, Bashford D, Bellott M, Dunbrack RL, Jr, Evanseck J, Field MJ, Fischer S, Gao J, Guo H, Ha S, Joseph D, Kuchnir L, Kuczera K, Lau FTK, Mattos C, Michnick S, Ngo T, Nguyen DT, Prodhom B, Reiher WE, III, Roux B, Schlenkrich M, Smith J, Stote R, Straub J, Watanabe M, Wiorkiewicz-Kuczera J, Yin D, Karplus M (1998) All-atom empirical potential for molecular modeling and dynamics studies of proteins. J Phys Chem B 102:3586-3616.
-
(1998)
J Phys Chem B
, vol.102
, pp. 3586-3616
-
-
MacKerell Jr., A.D.1
Bashford, D.2
Bellott, M.3
Dunbrack Jr., R.L.4
Evanseck, J.5
Field, M.J.6
Fischer, S.7
Gao, J.8
Guo, H.9
Ha, S.10
Joseph, D.11
Kuchnir, L.12
Kuczera, K.13
Lau, F.T.K.14
Mattos, C.15
Michnick, S.16
Ngo, T.17
Nguyen, D.T.18
Prodhom, B.19
Reiher III, W.E.20
Roux, B.21
Schlenkrich, M.22
Smith, J.23
Stote, R.24
Straub, J.25
Watanabe, M.26
Wiorkiewicz-Kuczera, J.27
Yin, D.28
Karplus, M.29
more..
-
23
-
-
74249106002
-
The use of automatic tools and human expertise in template-based modeling of CASP8 target proteins
-
Venclovas C, Margelevicius M (2009) The use of automatic tools and human expertise in template-based modeling of CASP8 target proteins. Proteins 77:81-88.
-
(2009)
Proteins
, vol.77
, pp. 81-88
-
-
Venclovas, C.1
Margelevicius, M.2
-
24
-
-
79953224771
-
Novel TLR3 inhibitor encoded by the African Swine Fever Virus (ASFV)
-
accepted 29 November 2010 in press
-
de Oliveira VL, Almeida SCP, Soares HR, Crespo A, Marshall-Clarke S, Parkhouse RME (accepted 29 November 2010) Novel TLR3 inhibitor encoded by the African Swine Fever Virus (ASFV). Arch Virol, in press.
-
Arch Virol
-
-
De Oliveira, V.L.1
Almeida, S.C.P.2
Soares, H.R.3
Crespo, A.4
Marshall-Clarke, S.5
Parkhouse, R.M.E.6
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