Characterization of a novel long-chain n-alkane-degrading strain, Dietzia sp. e1

Zeitschrift fur Naturforschung - Section C Journal of Biosciences

Volumn 65 C, Issue 11-12, 2010, Pages 693-700

  Bihari, Zoltán ^a   Szabó, Zsolt ^a   Szvetnik, Attila ^a   Balázsa, Margit ^a   Bartos, Péter ^a   Tolmacsov, Péter ^a   Zombori, Zoltán ^b   Kiss, István ^a  

^a BAY ZOLTÁN NONPROFIT LTD FOR APPLIED RESEARCH   (Hungary)

^b INSTITUTE OF EXPERIMENTAL MEDICINE   (Hungary)

Author keywords

Cell surface hydrophobicity; Dietzia; N alkane

Indexed keywords

DIETZIA;

EID: 79251475549     PISSN: 09395075     EISSN: None     Source Type: Journal    
DOI: 10.1515/znc-2010-11-1210     Document Type: Article

References (29)

1. Al-Awadhi H., Sulaiman R. H., Mahmoud H. M., and Radwan S. S. (2007), Alkaliphilic and halophilic hydrocarbon-utilizing bacteria from Kuwaiti coasts of the Arabian Gulf. Appl. Microbiol. Biotechnol. 77, 183 -186.
2. Baek K. H., Yoon B. D., Kim B. H., Cho D. H., Lee I. S., Oh H. M., and Kim H. S. (2007), Monitoring of microbial diversity and activity during bioremediation of crude oil-contaminated soil with different treatments. J. Microbiol. Biotechnol. 17, 67 -73.
3. Baldi F., Ivosevic N., Minacci A., Pepi M., Fani R., Svetlicic V., and Zutic V. (1999), Adhesion of Acinetobacter venetianus to diesel fuel droplets studied with in situ electrochemical and molecular probes. Appl. Environ. Microbiol. 65, 2041 -2048.
4. Bihari Z., Pettkó-Szandtner A., Csanádi G., Balázs M., Bartos P., Kessero P., Kiss I., and Mécs I. (2007), Isolation and characterization of a novel n-alkanedegrading strain, Acinetobacter haemolyticus AR-46. Z. Naturforsch. 62c, 285 -295.
5. Bødtker G., Hvidsten I. V., Barth T., and Torsvik T. (2009), Hydrocarbon degradation by Dietzia sp. A14101 isolated from an oil reservoir model column. Antonie van Leeuwenhoek 96, 459 -469.
6. Bredholt H., Bruheim P., Potocky M., and Eimhjellen K. (2002), Hydrophobicity development, alkane oxidation, and crude-oil emulsifi cation in a Rhodococcus species. Can. J. Microbiol. 48, 295 -304.
7. Brito E. M., Guyoneaud R., Goñi-Urriza M., Ranchou-Peyruse A., Verbaere A., Crapez M. A., Wasserman J. C., and Duran R. (2006), Characterization of hydrocarbonoclastic bacterial communities from mangrove sediments in Guanabara Bay, Brazil. Res. Microbiol. 157, 752 -762.
8. Chaillan F., Le Flèche A., Bury E., Phantavong Y. H., Grimont P., Saliot A., and Oudot J. (2004), Identifi cation and biodegradation potential of tropical aerobic hydrocarbon-degrading microorganisms. Res. Microbiol. 155, 587 -595.
9. Hamamura N., Olson S. H., Ward D. M., and Inskeep W. P. (2006), Microbial population dynamics associated with crude-oil biodegradation in diverse soils. Appl. Environ. Microbiol. 72, 6316 -6324.
10. Kleinsteuber S., Riis V., Fetzer I., Harms H., and Müller S. (2006), Population dynamics within a microbial consortium during growth on diesel fuel in saline environments. Appl. Environ. Microbiol. 72, 3531 -3542.
11. Koma D., Hasumi F., Yamamoto E., Ohta T., Chung S. Y., and Kubo M. (2001), Biodegradation of longchain n-paraffi ns from waste oil of car engine by Acinetobacter sp. J. Biosci. Bioeng. 91, 94 -96.
12. Leahy J. G., Khalid Z. M., Quintero E. J., Jones-Meehan J. M., Heidelberg J. F., Batchelor P. J., and Colwell R. R. (2003), The concentrations of hexadecane and inorganic nutrients modulate the production of extracellular membrane-bound vesicles, soluble protein, and bioemulsifi er by Acinetobacter venetianus RAG-1 and Acinetobacter sp. strain HO1-N. Can. J. Microbiol. 49, 569 -575.
13. Mayilraj S., Suresh K., Kroppenstedt R. M., and Saini H. S. (2006), Dietzia kunjamensis sp. nov., isolated from the Indian Himalayas. Int. J. Syst. Evol. Microbiol. 56, 1667 -1671.
14. Quatrini P., Scaglione G., De Pasquale C., Riela S., and Puglia A. M. (2008), Isolation of Gram-positive nalkane degraders from a hydrocarbon-contaminated Mediterranean shoreline. J. Appl. Microbiol. 104, 251 -259.
15. Radwan S. S., Al-Hasan R. H., Mahmoud H. M., and Eliyas M. (2007), Oil-utilizing bacteria associated with fi sh from the Arabian Gulf. J. Appl. Microbiol. 103, 2160 -2167.
16. Rainey F. A., Klatte S., Kroppenstedt R. M., and Stackebrandt E. (1995), Dietzia, a new genus including Dietzia maris comb. nov., formerly Rhodococcus maris. Int. J. Syst. Bacteriol. 45, 32-36.
17. Riis V., Kleinsteuber S., and Babel W. (2003), Infl uence of high salinities on the degradation of diesel fuel by bacterial consortia. Can. J. Microbiol. 49, 713 -721.
18. Sambrook J., Fritsch E. F., and Maniatis T. (1989), Molecular Cloning: a Laboratory Manual, 2nd ed. Cold Spring Harbor Laboratory Press, New York.
19. Sette L. D., Simioni K. C., Vasconcellos S. P., Dussan L. J., Neto E. V., and Oliveira V. M. (2007), Analysis of the composition of bacterial communities in oil reservoirs from a southern offshore Brazilian basin. Antonie Van Leeuwenhoek 91, 253 -266.
20. Smits T. H., Röthlisberger M., Witholt B., and van Beilen J. B. (1999), Molecular screening for alkane hydroxylase genes in Gram-negative and Gram-positive strains. Environ. Microbiol. 1, 307 -317.
21. Suzuki M. T. and Giovannoni S. J. (1996), Bias caused by template annealing in the amplifi cation of mixtures of 16S rRNA genes by PCR. Appl. Environ. Microbiol. 62, 625 -630.
22. Szvetnik A., Bihari Z., Szabó Z., Kelemen O., and Kiss I. (2010), Genetic manipulation tools for Dietzia spp. J. Appl. Microbiol. 109, 1845 -1852.
23. van Beilen J. B., Funhoff E. G., van Loon A., Just A., Kaysser L., Bouza M., Holtackers R., Röthlisberger M., Li Z., and Witholt B. (2006), Cytochrome P450 alkane hydroxylases of the CYP153 family are common in alkane-degrading eubacteria lacking integral membrane alkane hydroxylases. Appl. Environ. Microbiol. 72, 59 -65.
24. von der Weid I., Marques J. M., Cunha C. D., Lippi R. K., Dos Santos S. C., Rosado A. S., Lins U., and Seldin L. (2007), Identifi cation and biodegradation potential of a novel strain of Dietzia cinnamea isolated from a petroleum-contaminated tropical soil. Syst. Appl. Microbiol. 30, 331 -339.
25. Wentzel A., Ellingsen T. E., Kotlar H. K., Zotchev S. B., and Throne-Holst M. (2007), Bacterial metabolism of long-chain n-alkanes. Appl. Microbiol. Biotechnol. 76, 1209 -1221.
26. Whyte L. G., Slagman S. J., Pietrantonio F., Bourbonnière L., Koval S. F., Lawrence J. R., Inniss W. E., and Greer C. W. (1999), Physiological adaptations involved in alkane assimilation at a low temperature by Rhodococcus sp. strain Q15. Appl. Environ. Microbiol.65, 2961 -2968.
27. Whyte L. G., Smits T. H., Labbé D., Witholt B., Greer C. W., and van Beilen J. B. (2002), Gene cloning and characterization of multiple alkane hydroxylase systems in Rhodococcus strains Q15 and NRRL B-16531. Appl. Environ. Microbiol. 68, 5933 -5942.
28. Yassin A. F., Hupfer H., and Schaal K. P. (2006), Dietzia cinnamea sp. nov., a novel species isolated from a perianal swab of a patient with a bone marrow transplant. Int. J. Syst. Evol. Microbiol. 56, 641 -645.
29. Yumoto I., Nakamura A., Iwata H., Kojima K., Kusumoto K., Nodasaka Y., and Matsuyama H. (2002), Dietzia psychralcaliphila sp. nov., a novel, facultatively psychrophilic alkaliphile that grows on hydrocarbons. Int. J. Syst. Evol. Microbiol. 52, 85 -90.