Construction and characterization of Escherichia coli whole-cell biosensors for toluene and related compounds

Current Microbiology

Volumn 62, Issue 2, 2011, Pages 690-696

  Behzadian, F ^a   Barjeste, H ^a   Hosseinkhani, S ^b   Zarei, A R ^a  

^a Research Center for Sciences and Biotechnology   (Iran)

^b TARBIAT MODARES UNIVERSITY   (Iran)

Author keywords

[No Author keywords available]

Indexed keywords

AROMATIC NITRO COMPOUND; PARATHION; TOLUENE; TOLUENE DERIVATIVE; TRINITROTOLUENE;

ARTICLE; BACTERIAL STRAIN; BIOLUMINESCENCE; BIOSENSOR; CONTROLLED STUDY; CULTURE MEDIUM; ENZYME SPECIFICITY; ESCHERICHIA COLI; NONHUMAN; NUCLEOTIDE SEQUENCE; PLASMID; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN EXPRESSION; REGULATOR GENE; TRANSCRIPTION INITIATION SITE;

ARTIFICIAL GENE FUSION; BACTERIAL PROTEINS; BENZENE; BIOSENSING TECHNIQUES; DINITROBENZENES; DNA-BINDING PROTEINS; ESCHERICHIA COLI; GENE EXPRESSION; GENES, REPORTER; LUCIFERASES; PLASMIDS; PROMOTER REGIONS, GENETIC; PSEUDOMONAS PUTIDA; SENSITIVITY AND SPECIFICITY; TOLUENE; TRANSCRIPTION FACTORS; TRINITROTOLUENE;

ESCHERICHIA COLI; PSEUDOMONAS PUTIDA;

EID: 79151470037     PISSN: 03438651     EISSN: 14320991     Source Type: Journal    
DOI: 10.1007/s00284-010-9764-5     Document Type: Article

References (38)

1. D Abd-El-Haleem S Ripp C Scott GS Sayler 2002 A luxCDABE-based bioluminescent bioreporter for the detection of phenol J Ind Microbiol Biotechnol 5 233 237 10.1038/sj.jim.7000309 (Pubitemid 35379592)
2. Agency for Toxic Substances and Disease Registry (ATSDR); US Department of Health and Human Services, P.H.S. (2004) Interaction profile for benzene, toluene, ethylbenzene, and xylenes (BTEX)
3. Agency for Toxic Substances and Disease Registry (ATSDR); US Department of Health and Human Services, P.H.S. (2007) Toxicological profile for benzene
4. S Belkin 2003 Microbial whole-cell sensing systems of environmental pollutants Curr Opin Microbiol 3 206 212 10.1016/S1369-5274(03)00059-6 (Pubitemid 36841662)
5. HY Chen M Bjerknes R Kumar E Jay 1994 Determination of the optimal aligned spacing between the Shine-Dalgarno sequence and the translation initiation codon of Escherichia coli mRNA Nucleic Acids Res 22 4953 4957 1:CAS:528:DyaK2MXisl2nu7Y%3D 10.1093/nar/22.23.4953 7528374
6. JJC Dawson CO Iroegbu H Maciel GI Paton 2008 Application of luminescent biosensors for monitoring the degradation and toxicity of BTEX compounds in soils J Appl Microbiol 104 141 151 1:CAS:528:DC%2BD1cXisVOgsb8%3D 17922829
7. AR Emamzadeh S Hosseinkhani M Sadeghizadeh M Nikkhah MJ Chaichi M Mortazavi 2006 Stabilization of firefly luciferase against thermal stress by osmolytes J Biochem Mol Biol 39 578 585 1:CAS:528:DC%2BD28XhtFWqsbrP 17002879
8. J Garmendia A de las Heras TC Galvão V de Lorenzo 2008 Tracing explosive in soil with transcriptional regulators of Pseudomonas putida evolved for responding to nitrotoluenes Microb Biotechnol 1 236 246 1:CAS:528: DC%2BD1cXhsV2hsrfK 10.1111/j.1751-7915.2008.00027.x
9. A Greated L Lambertsen PA Williams CM Thomas 2002 Complete sequence of the IncP-9 TOL plasmid pWW0 from Pseudomonas putida Environ Microbiol 4 856 871 1:CAS:528:DC%2BD3sXkvVGrtA%3D%3D 10.1046/j.1462-2920.2002.00305.x 12534468 (Pubitemid 36064176)
10. LH Hansen SJ Sørensen 2000 Versatile biosensor vectors for detection and quantification of mercury FEMS Microbiol Lett 193 123 127 1:CAS:528:DC%2BD3cXotlCqtL8%3D 10.1111/j.1574-6968.2000.tb09413.x 11094290
11. AG Hay JF Rice BM Applegate NG Bright GS Sayler 2000 A bioluminescent whole-cell reporter for detection of 2,4-dichlorophenoxyacetic acid and 2,4-dichlorophenol in soil Appl Environ Microbiol 10 4589 4594 10.1128/AEM.66.10.4589-4594.2000
12. S Ikeno C Ogino T Ito N Shimizu 2003 Detection of benzene derivatives by recombinant E. coli with Ps promoter and GFP as a reporter protein Biochem Eng J 15 193 197 1:CAS:528:DC%2BD3sXltVSrtLk%3D 10.1016/S1369-703X(03)00003-2 (Pubitemid 36834548)
13. MN Kim HH Park WK Lim HJ Shin 2005 Construction and comparison of Escherichia coli whole-cell biosensors capable of detecting aromatic compounds J Microbiol Methods 60 235 245 1:CAS:528:DC%2BD2cXhtVKksbjN 10.1016/j.mimet.2004. 09.018 15590098 (Pubitemid 39601737)
14. E Kobatake T Niimi T Haruyama Y Ikariyama M Aizawa 1995 Biosensing of benzene derivatives in the environment by luminescent Escherichia coli Biosens Bioelectron 10 601 605 1:CAS:528:DyaK2MXmvVShs70%3D 10.1016/0956-5663(95)96936-S 7612210
15. IC Kong H Suh Z Yang RS Burlage 2004 A bioluminescent reporter strain utilizing the lower pathway promoter (Pm) of the xyl operon of Pseudomonas: optimization of a bioassay for m-toluate Adv Environ Res 8 647 654 1:CAS:528:DC%2BD2cXhtFWjs7Y%3D 10.1016/S1093-0191(03)00037-6 (Pubitemid 38153047)
16. MT Korpela JS Kurittu JT Karvinen MT Karp 1998 A recombinant Escherichia coli sensor strain for the detection of tetracyclines Anal Chem 70 4457 4462 1:CAS:528:DyaK1cXmtlSiurg%3D 10.1021/ac980740e 9823708 (Pubitemid 28518822)
17. AC Layton M Muccini MM Ghosh GS Sayler 1998 Construction of a bioluminescent reporter strain to detect polychlorinated biphenyls Appl Environ Microbiol 12 5023 5026
18. A Leedjarv A Ivask M Virta A Kahru 2006 Analysis of bioavailable phenols from natural samples by recombinant luminescent bacterial sensors Chemosphere 11 1910 1919 10.1016/j.chemosphere.2006.01.026 (Pubitemid 44092945)
19. Y-F Li F-Y Li C-L Ho VH-C Liao 2008 Construction and comparison of fluorescence and bioluminescence bacterial biosensors for the detection of bioavailable toluene and related compounds Environ Pollut 152 123 129 1:CAS:528:DC%2BD1cXivVOku7c%3D 10.1016/j.envpol.2007.05.002 17583401 (Pubitemid 351296080)
20. S Magrisso Y Erel S Belkin 2008 Microbial reporters of metal bioavailability Microb Biotechnol 1 320 330 1:CAS:528:DC%2BD1cXhsV2hs77N 10.1111/j.1751-7915.2008.00022.x
21. L Naylor 1999 Reporter gene technology: the future looks bright Biochem Pharmacol 58 749 757 1:CAS:528:DyaK1MXltVyjtrc%3D 10.1016/S0006-2952(99)00096-9 10449183 (Pubitemid 29329523)
22. T Nishihara T Iwabuchi T Nohon 1994 A T7 promoter vector with a transcriptional terminator for stringent expression of foreign genes Gene 44 29 36
23. A Orosz I Boros P Venetianer 1991 Analysis of the complex transcription termination region of the Escherichia coli rrnB gene Eur J Biochem 201 653 659 1:CAS:528:DyaK3MXmslWruro%3D 10.1111/j.1432-1033.1991.tb16326.x 1718749
24. Parales RE, Parales JV, Pelletier DA, Ditty JL (2008) Diversity of microbial toluene degradation pathways. In: Laskin AI, Gadd GM, Sariaslani S (eds) Advances in applied microbiology, vol 64, 1st edn. New York, Academic Press, pp 1-73
25. S-H Park D-H Lee K-H Oh C-K Kim 2000 Construction of a bioluminescent reporter using the luc gene and meta-cleavage dioxygenase promoter for detection of catecholic compounds J Microbiol 38 183 186 1:CAS:528:DC%2BD3cXnsF2gt7s%3D
26. A Riahi-Madvar S Hosseinkhani 2009 Design and characterization of novel trypsin-resistant firefly luciferases by site-directed mutagenesis Protein Eng Des Sel 22 655 663 1:CAS:528:DC%2BD1MXhtlWmu7vM 10.1093/protein/gzp047 19661129
27. S Ringquist S Shinedling D Barrick L Green J Binkley GD Stormo L Gold 1992 Translation initiation in Escherichia coli: sequences within the ribosome-binding site Mol Microbiol 6 1219 1229 1:CAS:528:DyaK38Xlt1Kmtb8%3D 10.1111/j.1365-2958.1992.tb01561.x 1375310
28. T Robin JR van der Meer 2008 Bacterial biosensors for measuring availability of environmental pollutants Sensors 8 4062 4080 10.3390/s8074062
29. GR Salehi Jouzani IV Goldenkova 2005 A new reporter gene technology: opportunities and perspectives Iran J Biotechnol 3 1 15
30. O Selifonova R Burlage T Barkay 1993 Bioluminescent sensors for detection of bioavailable Hg(II) in the environment Appl Environ Microbiol 59 3083 3090 1:CAS:528:DyaK3sXmtlemtro%3D 8215378
31. L Stiner LJ Halverson 2002 Development and characterization of a green fluorescent protein-based bacterial biosensor for bioavailable toluene and related compounds Appl Environ Microbiol 68 1962 1971 1:CAS:528: DC%2BD38XivFGlu7o%3D 10.1128/AEM.68.4.1962-1971.2002 11916719 (Pubitemid 34280008)
32. J Stocker D Balluch M Gsell H Harms JS Feliciano S Daunert JR van der Meer 2003 Development of a set of simple bacterial biosensors for quantitative and rapid field measurements of arsenite and arsenate in potable water Environ Sci Technol 37 4743 4750 1:CAS:528:DC%2BD3sXnt1Orsbc%3D 10.1021/es034258b 14594387 (Pubitemid 37266395)
33. S Tauriainen M Karp W Chang M Virta 1997 Recombinant luminescent bacteria for measuring bioavailable arsenite and antimonite Appl Environ Microbiol 63 4456 4461 1:CAS:528:DyaK2sXnt12ntLk%3D 9361432
34. S Tauriainen M Virta W Chang M Karp 1999 Measurement of firefly luciferase reporter gene activity from cells and lysates using Escherichia coli arsenite and mercury sensors Anal Biochem 272 191 198 1:CAS:528: DyaK1MXksFantLs%3D 10.1006/abio.1999.4193 10415088 (Pubitemid 29364982)
35. PTK Trang M Berg PH Viet NV Mui JR van der Meer 2005 Bacterial bioassay for rapid and accurate analysis of arsenic in highly variable groundwater samples Environ Sci Technol 19 7625 7630 10.1021/es050992e (Pubitemid 41407495)
36. K Turner S Xu P Pasini S Deo L Bachas S Daunert 2007 Hydroxylated polychlorinated biphenyl detection based on a genetically engineered bioluminescent whole-cell sensing system Anal Chem 15 5740 5745 10.1021/ac0705162 (Pubitemid 47229823)
37. C Werlen MCM Jaspers JR van der Meer 2004 Measurement of biologically available naphthalene in gas, and aqueous phases by use of a Pseudomonas putida biosensor Appl Environ Microbiol 70 43 51 1:CAS:528:DC%2BD2cXmvFajtw%3D%3D 10.1128/AEM.70.1.43-51.2004 14711624 (Pubitemid 38090186)
38. BM Willardson JF Wilkins TA Rand JM Schupp KK Hill P Keim PJ Jackson 1998 Development and testing of a bacterial biosensor for toluene-based environmental contaminants Appl Environ Microbiol 64 1006 1012 1:CAS:528:DyaK1cXhs1art7g%3D 9501440