Bacteria able to control foot and root rot and to promote growth of cucumber in salinated soils

Biology and Fertility of Soils

Volumn 47, Issue 2, 2011, Pages 197-205

  Egamberdieva, Dilfuza ^a,b   Kucharova, Zulfiya ^a   Davranov, Kakhramon ^a   Berg, Gabriele ^c   Makarova, Natasha ^d   Azarova, Tatyana ^d   Chebotar, Vladimir ^e   Tikhonovich, Igor ^d   Kamilova, Faina ^b,f   Validov, Shamil Z ^b,g   Lugtenberg, Ben ^b  

^a NATIONAL UNIVERSITY OF UZBEKISTAN   (Uzbekistan)

^b LEIDEN UNIVERSITY   (Netherlands)

^c GRAZ UNIVERSITY OF TECHNOLOGY   (Austria)

^d ALL RUSSIA RESEARCH INSTITUTE FOR AGRICULTURAL MICROBIOLOGY   (Russian Federation)

^e Bisolvi Inter   (Russian Federation)

^f Koppert Biological Systems   (Netherlands)

^g Biological Security   (Russian Federation)

Author keywords

Biological control; Cucumber; Cucumber foot and root rot; Fusarium solani; Plant growth promotion; Rhizobacteria

Indexed keywords

BIOLOGICAL CONTROL; CROP YIELD; DICOTYLEDON; FRUIT PRODUCTION; FUNGUS; GROWTH RATE; HORTICULTURE; PATHOGEN; RHIZOBACTERIUM; ROOT ROT; SALINE SOIL;

UZBEKISTAN;

BACTERIA (MICROORGANISMS); CUCUMIS SATIVUS; FUSARIUM SOLANI; PSEUDOMONAS; PSEUDOMONAS EXTREMORIENTALIS; PSEUDOMONAS FLUORESCENS; RHIZOBIALES; SERRATIA PLYMUTHICA; STENOTROPHOMONAS; STENOTROPHOMONAS RHIZOPHILA;

EID: 78751652495     PISSN: 01782762     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00374-010-0523-3     Document Type: Article

References (57)

1. Belimov AA, Dodd IC, Hontzeas N, Theobald J, Safronova VI, Davies WJ (2009) Rhizosphere bacteria containing 1-aminocyclopropane-1-carboxylate deaminase increase yield of plants grown in drying soil via both local and systemic hormone signalling. New Phytol 181: 435-447.
2. Berg G, Eberl L, Hartmann A (2005a) The rhizosphere as a reservoir for opportunistic human pathogenic bacteria. Environ Microbiol 7: 1673-1685.
3. Berg G, Opelt K, Zachow C, Lottmann J, Götz M, Costa R, Smalla K (2005b) The rhizosphere effect on bacteria antagonistic towards the pathogenic fungus Verticillium differs depending on plant species and site. FEMS Microbiol Ecol 56: 250-261.
4. Berg G, Egamberdieva D, Lugtenberg B, Hagemann M (2010) Symbiotic plant-microbe interactions: stress protection, plant growth promotion and biocontrol by Stenotrophomonas. In: Seckbach JMG, Grube M (eds) Symbiosis and stress: joint ventures in biology, cellular origin, life in extreme habitats and astrobiology 17. Springer, Berlin, pp 447-463.
5. Bloemberg GV, Lugtenberg BJ (2001) Molecular basis of plant growth-promotion and biocontrol by rhizobacteria. Curr Opin Plant Biol 4: 343-350.
6. Bloemberg GV, Lugtenberg BJJ (2004) Bacterial biofilms on plants: relevance and phenotypic aspects. In: Ghannoum R, O'Toole GA (eds) Microbial biofilms. ASM, Washington, pp 141-159.
7. Brown MRW, Foster JHS (1970) A simple diagnostic milk medium for Pseudomonas aeruginosa. J Clin Pathol 23: 172-177.
8. Castric PA (1975) Hydrogen cyanide, a secondary metabolite of Pseudomonas aeruginosa. Can J Microbiol 21: 613-618.
9. Chin-A-Woeng TFC, Bloemberg GV, Mulders IHM, Dekkers LC, Lugtenberg BJJ (2000) Root colonization is essential for biocontrol of tomato foot and root rot by the phenazine-1-carboxamide-producing bacterium Pseudomonas chlororaphis PCL1391. Mol Plant Microbe Interact 13: 1340-1345.
10. Costacurta A, Vanderleyden J (1995) Synthesis of phytohormones by plant-associated bacteria. Crit Rev Microbiol 21: 1-18.
11. Crighton EJ, Elliott SJ, Upshur R, van der Meer J, Small I (2003) The Aral Sea disaster and self-rated health. Health Place 9: 73-82.
12. Dobbelaere S, Croonenborghs A, Thys A, Broek AV, Vanderleyden J (1999) Phytostimulatory effect of A. brasilense wild type and mutant strains altered in IAA production on wheat. Plant Soil 212: 155-164.
13. Egamberdieva D, Kucharova Z (2009) Selection for root colonizing bacteria stimulating wheat growth in saline soils. Biol Fertil Soi 45: 563-571.
14. Egamberdieva D, Kamilova F, Validov S, Gafurova L, Kucharova Z, Lugtenberg B (2008) High incidence of plant growth-stimulating bacteria associated with the rhizosphere of wheat grown on salinated soil in Uzbekistan. Environ Microbiol 10: 1-9.
15. Egamberdiyeva D, Gafurova L, Islam KR (2007) Salinity effects on irrigated soil chemical and biological properties in the Syr Darya basin of Uzbekistan. In: Lal R, Sulaimanov M, Stewart B, Hansen D, Doraiswamy P (eds) Climate change and terrestrial C sequestration in Central Asia. Taylor-Francis, New York, pp 147-162.
16. FAO (2002) Crops and drops: making the best use of water for agriculture. FAO, Rome. Available at http://www. fao. org/docrep/w5146e/w5146e0a. htm.
17. FAOSTAT (2007) FAOSTAT On-line. United Nations Food and Agriculture Organization, Rome. Available at http://faostat. fao. org/default. aspx.
18. Glick BR, Penrose DM, Li JP (1998) A model for the lowering of plant ethylene concentrations by plant growth-promoting bacteria. J Theor Biol 190: 63-68.
19. Glick BR, Cheng Z, Czarny J, Duan J (2007) Promotion of plant growth by ACC deaminase-producing soil bacteria. Eur J Plant Pathol 119: 329-339.
20. Haas D, Defago G (2005) Biological control of soil-borne pathogens by fluorescent pseudomonads. Nat Rev Microbiol 3: 307-319.
21. Hankin L, Anognostakis SL (1977) Solid media containing carboxymethylcellulose to detect Cx cellulose activity of microorganisms. J Gen Microbiol 98: 109-115.
22. Howe TG, Ward JM (1976) The utilization of Tween 80 as carbon source by Pseudomonas. J Gen Microbiol 92: 234-235.
23. Jackson M (1997) Hormones from roots as signals for the shoots of stressed plants. Trends Plant Sci 2: 22-28.
24. Kamilova F, Validov S, Azarova T, Mulders I, Lugtenberg B (2005) Enrichment for enhanced competitive plant root tip colonizers selects for a new class of biocontrol bacteria. Environ Microbiol 7: 1809-1817.
25. Kamilova F, Kravchenko LV, Shaposhnikov AI, Azarova T, Makarova N, Lugtenberg BJJ (2006) Organic acids, sugars, and L-tryptophane in exudates of vegetables growing on stonewool and their effects on activities of rhizosphere bacteria. Mol Plant Microb Interact 19: 250-256.
26. Kravchenko LV, Leonova EI, Tikhonovich IA (1994) Effect of root exudates of non-legume plants on the response of auxin production by associated diazotrophs. Microb Releases 2: 267-271.
27. Kravchenko V, Makarova NM, Azarova TS, Provorov NA, Tikhonovich IA (2002) Isolation and phenotypic characterization of plant growth-promoting rhizobacteria with high antiphytopathogenic activity and root-colonizing ability. Microbiology 71: 521-525.
28. Kravchenko V, Azarova TS, Leonova-Erko EI, Shaposhnikov AI, Makarova NM, Tikhonovich IA (2003) Root exudates of tomato plants and their effect on the growth and antifungal activity of Pseudomonas strains. Microbiology 72: 48-53.
29. Kravchenko L, Azarova TS, Makarova NM, Tikhonovich IA (2004) The effect of tryptophan present in plant root exudates on the phytostimulating activity of rhizobacteria. Microbiology 73: 195-198.
30. Kravchenko LV, Shaposhnikov I, Makarova NM, Azarova TS, Tikhonovich IA (2006) Dynamics of abundance of antifungal strains of Pseudomonas in the rhizosphere of hydroponic cucumbers grown on greenhouse mineral substrate. Microbiology 75: 404-409.
31. Kurth E, Cramer GR, Lauchli A, Epstein E (1986) Effects of NaCl and CaCl on cell enlargement and cell production in cotton roots. Plant Physiol 82: 1102-1106.
32. Leeman M, van Pelt JA, den Puden FM, Heinsbroek M, Bakker PAHM, Schippers B (1995) Induction of systemic resistance by Pseudomonas fluorescens in radish cultivars differing in susceptibility to Fusarium wilt, using a novel bioassay. Eur J Plant Pathol 101: 655-664.
33. Lifshitz R, Kloepper JW, Kozlowski M, Simonson C, Carlson J, Tipping EM, Zalesk I (1987) Growth promotion of canola (rapeseed) seedlings by a strain of Pseudomonas putida under gnotobiotic conditions. Can J Microb 33: 390-395.
34. Lugtenberg BJJ, Kamilova FD (2004) Rhizosphere management: microbial manipulation for biocontrol. In: Goodman RM (ed) Encyclopedia of plant and crop science. Marcel Dekker, New York, pp 1098-1101.
35. Lugtenberg B, Kamilova F (2009) Plant growth-promoting rhizobacteria. Annu Rev Microbiol 63: 541-556.
36. Lugtenberg BJJ, Kravchenko LV, Simons M (1999) Tomato seed and root exudate sugars: composition, utilization by Pseudomonas biocontrol strains and role in rhizosphere colonization. Environ Microbiol 1: 439-446.
37. Lugtenberg BJJ, Dekkers L, Bloemberg GV (2001) Molecular determinants of rhizosphere colonization by Pseudomonas. Annu Rev Phytopathol 39: 461-490.
38. Mayak S, Tirosh T, Glick BR (2004) Plant growth-promoting bacteria that confer resistance to water stress in tomatoes and peppers. Plant Sci 166: 525-530.
39. Miller KJ, Wood JM (1996) Osmoadaption by rhizosphere bacteria. Ann Rev Microbiol 50: 101-136.
40. Okon Y, Itzigsohn R (1995) The development of Azospirillum as a commercial inoculate for improving crop yields. Biotechnol Adv 13: 415-424.
41. Okon Y, Bloemberg GV, Lugtenberg BJJ (1998) Biotechnology of biofertilization and phytostimulation. In: Altman A (ed) Agricultural biotechnology. Marcel Dekker, New York, pp 327-350.
42. Raaijmakers JM, Paulitz CT, Steinberg C, Alabouvette C, Moenne-Loccoz Y (2009) The rhizosphere: a playground and battlefield for soilborne pathogens and beneficial microorganisms. Plant Soil 321: 341-361.
43. Roberts P, Muchovej R, Achor D, Baker CA, Bruton B, Adkins S (2005) Investigation into a mature watermelon vine decline and fruit rot. Phytopathology 95: S89.
44. Sakhabutdinova AR, Fatkhutdinova DR, Bezrukova MV, Shakirova FM (2003) Salicylic acid prevents the damaging action of stress factors on wheat plants. Bulg J Plant Physiol 21: 314-319.
45. Shirokova Y, Forkutsa I, Sharafutdinova N (2000) Use of electrical conductivity instead of soluble salts for soil salinity monitoring in Central Asia. Irr Drain Sys 14: 199-205.
46. Siddiqui A, Haas D, Heeb S (2005) Extracellular protease of Pseudomonas fluorescens CHA0, a biocontrol factor with activity against the root knot nematode Meloydogyne incognita. Appl Environ Microbiol 71: 5646-5649.
47. Smith D (1991) Growing pollution and health concerns in the Lower Amu Dar'ya basin, Uzbekistan. Sov Geogr 38: 553-565.
48. Spaepen S, Vanderleyden J, Okon Y (2009) Plant growth-promoting actions of rhizobacteria. In: van Loon LC, Ed Kader JC, Delseny M (eds) Adv Bot Res 51: 283-320.
49. Thomashow LS, Weller DM (1996) Current concepts in the use of introduced bacteria for biological disease control: mechanisms and antifungal metabolites. In: Stacey G, Keen NT (eds) Plant-microbe interactions. Chapman and Hall, London, pp 187-235.
50. van Loon LC (2007) Plant responses to plant growth-promoting bacteria. Eur J Plant Pathol 119: 243-254.
51. Walsh GA, Murphy RA, Killeen GF, Headon DR, Power RF (1995) Technical note: detection and quantification of supplemental fungal b-glucanase activity in animal feed. J Anim Sci 73: 1074-1076.
52. Werner JE, Finkelstein RR (1995) Arabidopsis mutants with reduced response to NaCl and osmotic stress. Physiol Plant 93: 659-666.
53. Wolf A, Fritze A, Hagemann M, Berg G (2002) Stenotrophomonas rhizophila sp. nov., a novel plant-associated bacterium with antifungal properties. Int J Evol Syst Microbiol 52: 1937-1944.
54. Zeng QY, Wang XR, Blomquist G (2003) Development of mitochondrial ssu rDNA-based oligonucleotide probes for specific detection of common airborne fungi. Mol Cell Probes 17: 281-288.
55. Zhang N, O'Donnell K, Sutton DA, Nalim FA, Summerbell RC, Padhye AA, Geiser DM (2006) Members of the Fusarium solani species complex that cause infections in both humans and plants are common in the environment. J Clin Microbiol 44: 2186-2190.
56. Zholkevich VN, Pustovoytova TN (1993) The role of Cucumis sativum L leaves and content of phytohormones under soil drought. Russ J Plant Physiol 40: 676-680.
57. Zitter TA, Hopkins DL, Thomas CE (1996) Compendium of cucurbit diseases. APS, St Paul.