Two coiled-coil regions of Xanthomonas oryzae pv. oryzae harpin differ in oligomerization and hypersensitive response induction

Amino Acids

Volumn 40, Issue 2, 2011, Pages 381-392

  Ji, Zhaolin ^a   Song, Congfeng ^a   Lu, Xuzhong ^b   Wang, Jinsheng ^a  

^a NANJING AGRICULTURAL UNIVERSITY   (China)

^b RICE RESEARCH INSTITUTE   (China)

Author keywords

helix; Coiled coil; Hpa1; Hypersensitive response; Oligomerization; Xanthomonas oryzae

Indexed keywords

BACTERIAL PROTEIN; HARPIN; UNCLASSIFIED DRUG;

ALPHA HELIX; AMINO TERMINAL SEQUENCE; ARTICLE; CARBOXY TERMINAL SEQUENCE; COILED COIL REGION; CONTROLLED STUDY; NONHUMAN; NUCLEOTIDE SEQUENCE; OLIGOMERIZATION; PHYSICAL CHEMISTRY; PLANT RESPONSE; PRIORITY JOURNAL; PROTEIN FUNCTION; PROTEIN SECONDARY STRUCTURE; TOBACCO; TYPE III SECRETION SYSTEM; XANTHOMONAS; XANTHOMONAS ORYZAE;

AMINO ACID SEQUENCE; BACTERIAL OUTER MEMBRANE PROTEINS; MOLECULAR SEQUENCE DATA; PLANT DISEASES; PROTEIN STRUCTURE, TERTIARY; SEQUENCE ALIGNMENT; TOBACCO; XANTHOMONAS;

BACTERIA (MICROORGANISMS); NICOTIANA TABACUM; XANTHOMONAS ORYZAE; XANTHOMONAS ORYZAE PV. ORYZAE;

EID: 78751575734     PISSN: 09394451     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00726-010-0643-y     Document Type: Article

References (40)

1. JR Alfano A Collmer 1997 The type III secretion pathway of plant pathogenic bacteria: trafficking harpins, Avr proteins and death J Bacterial 179 5655 5662 1:CAS:528:DyaK2sXmt1GgsLw%3D
2. JR Alfano DW Bauer TM Milos A Collmer 1996 Analysis of the role of the Pseudomonas syringae pv. syringae HrpZ harpin in elicitation of the hypersensitive response in tobacco using functionally non-polar hrpZ deletion mutations, truncated HrpZ fragments, and hrmA mutations Mol Microbiol 19 715 728 1:CAS:528:DyaK28XhsVKhu7Y%3D 10.1046/j.1365-2958.1996.415946.x 8820642
3. Amersham Biosciences (2002) Gel filtration: principles and methods. GE Healthcare Bio-Sciences AB, Björkgatan 30, 751 84 Uppsala, Sweden
4. CJ Baker EW Orlandi NM Mock 1993 Harpin, an elicitor of the hypersensitive response in tobacco caused by Erwinia amylovora, elicits active oxygen production in suspension cells Plant Physiol 102 1341 1344 1:CAS:528:DyaK3sXms1Klu70%3D 12231911
5. P Burkhard M Meier A Lustig 2000 Design of a minimal protein oligomerization domain by a structural approach Prot Sci 9 2294 2301 1:CAS:528:DC%2BD3MXns1aluw%3D%3D 10.1110/ps.9.12.2294
6. P Burkhard J Stetefeld SV Strelkov 2001 Coiled coils: a highly versatile protein folding motif Trends Cell Biol 11 82 88 1:CAS:528:DC%2BD3MXpslyktg%3D%3D 10.1016/S0962-8924(00)01898-5 11166216 (Pubitemid 32144755)
7. P Burkhard S Ivaninskii A Lustig 2002 Improving coiled-coil stability by optimizing ionic interactions J Mol Biol 318 901 910 1:CAS:528: DC%2BD38Xks1KrsLc%3D 10.1016/S0022-2836(02)00114-6 12054832 (Pubitemid 34729378)
8. YH Chen JT Yang KH Chau 1974 Determination of the helix and beta form of proteins in aqueous solution by circular dichroism Biochemistry 13 3350 3359 1:CAS:528:DyaE2MXht1GksA%3D%3D 10.1021/bi00713a027 4366945
9. MA Cooper 2004 Advance in membrane receptor screening and analysis J Mol Recognit 17 286 315 1:CAS:528:DC%2BD2cXlslens74%3D 10.1002/jmr.675 15227637 (Pubitemid 38893598)
10. FC Crick 1953 The packing of α-helices: simple coiled coils Acta Crystallogr A 6 689 697 1:CAS:528:DyaG2cXhsVw%3D 10.1107/S0365110X53001964
11. RM Delahay G Frankel 2002 Coiled-coil proteins associated with type III secretion systems: a versatile domain revisited Mol Microbiol 45 905 916 1:CAS:528:DC%2BD38XmvVektbw%3D 10.1046/j.1365-2958.2002.03083.x 12180912 (Pubitemid 35007436)
12. H Dong TP Delaney SV Beer 1999 Harpin induces disease resistance in Arabidopsis through the systemic acquired resistance pathway mediated by salicylic acid and the NIM1 gene Plant J 20 207 215 1:CAS:528:DyaK1MXotFait7g%3D 10.1046/j.1365-313x.1999.00595.x 10571880
13. K Dutta A Alexandrov H Huang SM Pascal 2001 pH-induced folding of an apoptotic coiled-coil Protein Sci 10 2531 2540 1:CAS:528:DC%2BD3MXovVyru7s%3D 10.1110/ps.ps.28801 11714921 (Pubitemid 33091577)
14. JE Galán A Collmer 1999 Type III secretion machines: bacterial devices for protein delivery into host cells Science 284 1322 1328 10.1126/science.284.5418.1322 10334981 (Pubitemid 29289652)
15. S Gopalan W Wei SY He 1996 hrp gene-dependent induction of hin1: a plant gene activated rapidly by both harpins and the avrPto gene-mediated signal Plant J 10 591 600 1:CAS:528:DyaK28XmvF2lurc%3D 10.1046/j.1365-313X.1996.10040591.x 8893538 (Pubitemid 27103013)
16. DS Guttman BA Vinatzer SF Sarkar MV Ranall G Kettler JT Greenberg 2002 A functional screen for the type III (Hrp) secretome of the plant pathogen Pseudomonas syringae Science 295 1722 1726 1:CAS:528:DC%2BD38Xhslehs7Y%3D 10.1126/science.295.5560.1722 11872842 (Pubitemid 34202909)
17. PB Harbury T Zhang PS Kim T Alber 1993 A switch between two-, three-, and four-stranded coiled-coils in GCN4 leucine zipper mutants Science 262 1401 1407 1:CAS:528:DyaK2cXpvFOitQ%3D%3D 10.1126/science.8248779 8248779
18. Pss: a protein that is secreted via the hrp pathway and elicits the hypersensitive response in plants Cell 73 1255 1266 1:CAS:528: DyaK3sXmsVGjtrc%3D 10.1016/0092-8674(93)90354-S 8324821 (Pubitemid 23201141)
19. JF Kim SV Beer 1998 HrpW of Erwinia amylovora, a new harpin that contains a domain homologous to pectate lyases of a distinct class J Bacteriol 180 5203 5210 1:CAS:528:DyaK1cXms1ehsLo%3D 9748455
20. J Lee DF Klessig T Nurnberger 2001 A harpin binding site in tobacco plasma membranes mediated activation of the pathogenesis-related gene HIN1 independent of extracellular calcium but dependent on mitogen-activated protein kinase activity Plant Cell 13 1079 1093 1:CAS:528:DC%2BD3MXktVSlu70%3D 10.1105/tpc.13.5.1079 11340183 (Pubitemid 32480643)
21. PB Lindgren RC Peet NJ Panopoulos 1986 Gene cluster of Pseudomonas syringae pv. "phaseolicola" controls pathogenicity of bean plants and hypersensitivity on nonhost plants J Bacteriol 168 512 522 1:CAS:528: DyaL2sXhtFKi 3023280
22. KJ Lumb CM Carr PS Kim 1994 Subdomain folding of the coiled-coil leucine-zipper from the bZIP transcriptional activator GCN4 Biochemistry 33 7361 7367 1:CAS:528:DyaK2cXksFalsr0%3D 10.1021/bi00189a042 8003501 (Pubitemid 24208776)
23. AN Lupas 1996 Coiled coils: new structures and new functions Trends Biochem Sci 21 375 382 1:CAS:528:DyaK28XmsleitLs%3D 8918191
24. AN Lupas 1996 Prediction and analysis of coiled-coil structures Methods Enzymol 266 513 525 1:CAS:528:DyaK28Xltl2ntLg%3D 10.1016/S0076-6879(96)66032-7 8743703 (Pubitemid 26165886)
25. AN Lupas M Van Dyke J Stock 1991 Predicting coiled coils from protein sequences Science 252 1162 1164 1:CAS:528:DyaK3MXkvVOksLw%3D 10.1126/science.252.5009.1162
26. M Meier A Lustig U Aebi P Burkhard 2002 Removing an interhelical salt bridge abolishes coiled-coil formation in a de novo designed peptide J Struct Biol 137 65 72 1:CAS:528:DC%2BD38XksVygsL0%3D 10.1006/jsbi.2002.4467 12064934 (Pubitemid 35430422)
27. JR Newman E Wolf P Kim 2000 A computationally directed screen identifying interacting coiled coils from Saccharomyces cerevisiae Proc Natl Acad Sci U S A 97 13203 13208 1:CAS:528:DC%2BD3cXosVKqurc%3D 10.1073/pnas.97.24.13203 11087867
28. J Oh JG Kim E Jeon CH Yoo JS Moon S Rhee I Hwang 2007 Amyloidogenesis of type III-dependent harpins from plant pathogenic bacteria J Biol Chem 282 13601 13609 1:CAS:528:DC%2BD2sXks1Ggtbk%3D 10.1074/jbc.M602576200 17314101 (Pubitemid 47100514)
29. MJ Pallen G Dougan G Frankel 1997 Coiled-coil domains in proteins secreted by type III secretion systems Mol Microbiol 25 423 425 1:CAS:528:DyaK2sXls1yjtrk%3D 10.1046/j.1365-2958.1997.4901850.x 9282753
30. GJ Rairdan SM Collier MA Sacco T Thomas TT Baldwin T Boettrich P Moffetta 2008 The coiled-coil and nucleotide binding domains of the potato Rx disease resistance protein function in pathogen recognition and signaling Plant Cell 20 739 751 1:CAS:528:DC%2BD1cXlsl2kur0%3D 10.1105/tpc.107.056036 18344282 (Pubitemid 352844004)
31. JP Sinn CS Oh PJ Jensen SC Carpenter SV Beer TW McNellis 2008 The C-terminal half of the HrpN virulence protein of the fire blight pathogen Erwinia amylovora is essential for its secretion and for its virulence and avirulence activities Mol Plant Microbe Interact 21 1387 1397 1:CAS:528:DC%2BD1cXht1ymsLbM 10.1094/MPMI-21-11-1387 18842089
32. pss protein Plant J 9 431 439 1:CAS:528:DyaK28XivFWnt7Y%3D 10.1046/j.1365-313X.1996.09040431.x (Pubitemid 3043526)
33. JY Su RS Hodges CM Kay 1994 Effect of chain length on the formation and stability of synthetic alpha-helical coiled coils Biochemistry 33 15501 15510 1:CAS:528:DyaK2MXit1Gms7c%3D 10.1021/bi00255a032 7803412
34. Pss and identification of leucine-zipper-like motifs in harpins Biochim Biophys Acta 1794 1684 1692 1:CAS:528:DC%2BD1MXhtFGqsb3M 19665594
35. KS Thompson CR Vinson E Freire 1993 Thermodynamic characterization of the structural stability of the coiled-coil region of the bZIP transcription factor GCN4 Biochemistry 32 5491 5496 1:CAS:528:DyaK3sXisFSju7s%3D 10.1021/bi00072a001 8504069
36. XY Wang M Li JH Zhang Y Zhang GY Zhang JS Wang 2007 Identification of a key functional region in harpins from Xanthomonas that suppresses protein aggregation and mediates harpin expression in E. coli Mol Biol Rep 34 189 198 1:CAS:528:DC%2BD2sXotFynu78%3D 10.1007/s11033-006-9034-6 17180733 (Pubitemid 47124946)
37. XY Wang CF Song WG Miao ZL Ji XB Wang Y Zhang JH Zhang JS Hu W Borth JS Wang 2008 Mutations in the N-terminal coding region of the harpin protein Hpa1 from Xanthomonas oryzae cause loss of hypersensitive reaction induction in tobacco Appl Microbiol Biotechnol 81 359 369 1:CAS:528:DC%2BD1cXhtlaqsbjK 10.1007/s00253-008-1651-7 18791711
38. ZM Wei RJ Laby CH Zumoff DW Bauer SY He A Collmer SV Beer 1992 Harpin, elicitor of the hypersensitive response produced by the plant pathogen Erwinia amylovora Science 257 85 88 1:CAS:528:DyaK3sXktVCmsrY%3D 10.1126/science.1621099 1621099
39. E Wolf PS Kim B Berger 1997 MultiCoil: a program for predicting two- and three-stranded coiled coils Protein Sci 6 1179 1189 1:CAS:528:DyaK2sXktVyltr0%3D 10.1002/pro.5560060606 9194178
40. NE Zhou CM Kay RS Hodges 1994 The role of interhelical ionic interactions in controlling protein folding and stability. De novo designed synthetic two-stranded α-helical coiled-coils J Mol Biol 237 500 512 1:CAS:528:DyaK2cXltVahsbY%3D 10.1006/jmbi.1994.1250 8151708 (Pubitemid 24156420)