Genome sequence of weissella cibaria KACC 11862

Journal of Bacteriology

Volumn 193, Issue 3, 2011, Pages 797-798

  Kim, Dae Soo ^a   Choi, Sang Haeng ^a   Kim, Dong Wook ^a   Nam, Seong Hyeuk ^a   Kim, Ryong Nam ^a   Kang, Aram ^a,b   Kim, Aeri ^a,b   Park, Hong Seog ^a,b  

^a Korea Research Institute of Bioscience and Biotechnology (KRIBB)   (South Korea)

^b University of Science and Technology (UST)   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIAL GENOME; BACTERIUM CONTAMINATION; FOOD CONTAMINATION; GENE SEQUENCE; KOREA; NONHUMAN; PRIORITY JOURNAL; WEISSELLA; WEISSELLA CIBARIA;

DNA, BACTERIAL; FOOD MICROBIOLOGY; GENOME, BACTERIAL; KOREA; MOLECULAR SEQUENCE DATA; SEQUENCE ANALYSIS, DNA; WEISSELLA;

BACTERIA (MICROORGANISMS); LEUCONOSTOC; POSIBACTERIA; WEISSELLA CIBARIA;

EID: 78751549933     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.01342-10     Document Type: Article

References (11)

1. Aziz, R. K., et al. 2008. The RAST server: rapid annotations using subsystems technology. BMC Genomics 9:75.
2. Birnboim, H. C., and J. Doly. 1979. A rapid alkaline extraction procedure for screening recombinant plasmid DNA. Nucleic Acids Res. 7:1513-1523.
3. Cheigh, H. S., and K. Y. Park. 1994. Biochemical, microbiological, and nutritional aspects of kimchi (Korean fermented vegetable products). Crit. Rev. Food Sci. Nutr. 34:175-203.
4. Delcher, A. L., K. A. Bratke, E. C. Powers, and S. L. Salzberg. 2007. Identifying bacterial genes and endosymbiont DNA with Glimmer. Bioinformatics 23:673-679.
5. Kim, M., and J. Chun. 2005. Bacterial community structure in kimchi, a Korean fermented vegetable food, as revealed by 16S rRNA gene analysis. Int. J. Food Microbiol. 103:91-96.
6. Lagesen, K., et al. 2007. RNAmmer: consistent and rapid annotation of ribosomal RNA genes. Nucleic Acids Res. 35:3100-3108.
7. Lee, J. S., et al. 2002. Weissella koreensis sp. nov., isolated from kimchi. Int. J. Syst. Evol. Microbiol. 52:1257-1261.
8. Liolios, K., et al. 2010. The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata. Nucleic Acids Res. 38:D346-D354.
9. Lowe, T. M., and S. R. Eddy. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25:955-964.
10. Oh, H. M., et al. 2010. Complete genome sequence analysis of Leuconostoc kimchii IMSNU 11154. J. Bacteriol. 192:3844-38445.
11. Tatusov, R. L., E. V. Koonin, and D. J. Lipman. 1997. A genomic perspective on protein families. Science 278:631-637.