메뉴 건너뛰기




Volumn 30, Issue 1, 2011, Pages 3-8

Structural characteristics and phylogenetic analysis of the mitochondrial genome of the sugarcane borer, diatraea saccharalis (Lepidoptera: Crambidae)

Author keywords

[No Author keywords available]

Indexed keywords

RIBOSOME RNA; TRANSFER RNA;

EID: 78651465137     PISSN: 10445498     EISSN: None     Source Type: Journal    
DOI: 10.1089/dna.2010.1058     Document Type: Article
Times cited : (40)

References (30)
  • 2
    • 49749112801 scopus 로고    scopus 로고
    • Sequence and analysis of the mitochondrial DNA control region in the sugarcane borer Diatraea saccharalis (Lepidoptera: Crambidae)
    • Bravo, J.P., Felipes, J., Zanatta, D.B., Silva, J.L., and Fernandez, M.A. (2008b). Sequence and analysis of the mitochondrial DNA control region in the sugarcane borer Diatraea saccharalis (Lepidoptera: Crambidae). Braz Arch Biol Technol 51, 671-677.
    • (2008) Braz Arch Biol Technol , vol.51 , pp. 671-677
    • Bravo, J.P.1    Felipes, J.2    Zanatta, D.B.3    Silva, J.L.4    Fernandez, M.A.5
  • 3
    • 49749104270 scopus 로고    scopus 로고
    • DNA barcode information for the sugar cane moth borer Diatraea saccharalis
    • Bravo, J.P., Silva, J.L., Munhoz, R.E.F., and Fernandez, M.A. (2008a). DNA barcode information for the sugar cane moth borer Diatraea saccharalis. Gen Mol Res 7, 741-748.
    • (2008) Gen Mol Res , vol.7 , pp. 741-748
    • Bravo, J.P.1    Silva, J.L.2    Munhoz, R.E.F.3    Fernandez, M.A.4
  • 4
    • 36148999042 scopus 로고    scopus 로고
    • The Mitochondrial genome of the screamer Louse Bothriometopus (Phthiraptera: Ischnocera): effects of extensive gene rearrangements on the evolution of the genome
    • Cameron, S.L., Johnson, K.P., and Whiting, M.F. (2007). The Mitochondrial genome of the screamer Louse Bothriometopus (Phthiraptera: Ischnocera): effects of extensive gene rearrangements on the evolution of the genome. J Mol Evol 65, 589-604.
    • (2007) J Mol Evol , vol.65 , pp. 589-604
    • Cameron, S.L.1    Johnson, K.P.2    Whiting, M.F.3
  • 5
    • 37549067395 scopus 로고    scopus 로고
    • The complete mito-chondrial genome of the tobacco hornworm, Manduca sexta, (Insecta; Lepidoptera: Sphingidae), and an examination of mitochondrial gene variability within butterflies and moths
    • Cameron, S.L., and Whiting, M.F. (2008). The complete mito-chondrial genome of the tobacco hornworm, Manduca sexta, (Insecta; Lepidoptera: Sphingidae), and an examination of mitochondrial gene variability within butterflies and moths. Gene 408, 112-123.
    • (2008) Gene , vol.408 , pp. 112-123
    • Cameron, S.L.1    Whiting, M.F.2
  • 6
    • 33947577385 scopus 로고    scopus 로고
    • The complete nucleotide sequence and gene organization of the mitochondrial genome of the bumblebee, Bombus ignitus (Hymenoptera: Apidae)
    • Cha, S.Y., Yoon, H.J., Lee, E.M., Yoon, M.H., Hwang, J.S., Jin, B.R., Han, Y.S., and Kim, I. (2007). The complete nucleotide sequence and gene organization of the mitochondrial genome of the bumblebee, Bombus ignitus (Hymenoptera: Apidae). Gene 392, 206-220.
    • (2007) Gene , vol.392 , pp. 206-220
    • Cha, S.Y.1    Yoon, H.J.2    Lee, E.M.3    Yoon, M.H.4    Hwang, J.S.5    Jin, B.R.6    Han, Y.S.7    Kim, I.8
  • 7
    • 33645452236 scopus 로고    scopus 로고
    • Partial mitochondrial genome sequences of Ostrinia nubilalis and Ostrinia furnicalis
    • Coates, B., Sumerford, D., Hellmich, R., and Lewis, L. (2005). Partial mitochondrial genome sequences of Ostrinia nubilalis and Ostrinia furnicalis. Int J Biol Sci 1, 13-18.
    • (2005) Int J Biol Sci , vol.1 , pp. 13-18
    • Coates, B.1    Sumerford, D.2    Hellmich, R.3    Lewis, L.4
  • 8
    • 0036295093 scopus 로고    scopus 로고
    • Restriction fragment-length polymorphism of the mtDNA ApT-rich region as a genetic marker in Aedes aegypti (Diptera: Culicidae
    • Duenas, J.C.R., Panzetta-Dutari, G.M., Blanco, A., and Gardenal, C.N. (2002). Restriction fragment-length polymorphism of the mtDNA ApT-rich region as a genetic marker in Aedes aegypti (Diptera: Culicidae). Ann Entomol Soc Am 95, 352-358.
    • (2002) Ann Entomol Soc Am , vol.95 , pp. 352-358
    • Duenas, J.C.R.1    Panzetta-Dutari, G.M.2    Blanco, A.3    Gardenal, C.N.4
  • 9
    • 0031020582 scopus 로고    scopus 로고
    • Nucleotide composition bias affects amino acid content in proteins coded by animal mitochondria
    • Foster, P.G., Jermiin, L.S., and Hickey, D.S. (1997). Nucleotide composition bias affects amino acid content in proteins coded by animal mitochondria. J Mol Evol 44, 282-288.
    • (1997) J Mol Evol , vol.44 , pp. 282-288
    • Foster, P.G.1    Jermiin, L.S.2    Hickey, D.S.3
  • 10
    • 68549089107 scopus 로고    scopus 로고
    • The complete nucleotide sequence of the mi-tochondrial genome of the cabbage butterfly, Artogeia melete (Lepidoptera: Pieridae)
    • Hong, G.Y., Jiang, S.T., Yu, M., Yang, Y., Li, F., Xue, F.S., and Wei, Z.J. (2009). The complete nucleotide sequence of the mi-tochondrial genome of the cabbage butterfly, Artogeia melete (Lepidoptera: Pieridae). Acta Biochim Biophys Sin 41, 446-455.
    • (2009) Acta Biochim Biophys Sin , vol.41 , pp. 446-455
    • Hong, G.Y.1    Jiang, S.T.2    Yu, M.3    Yang, Y.4    Li, F.5    Xue, F.S.6    Wei, Z.J.7
  • 11
    • 68349096591 scopus 로고    scopus 로고
    • Detection and monitoring of Bacillus thuringiensis resistance alleles in the sugarcane borer, Diatraea saccharalis (F.)
    • T.V. Wolf and J.P. Koch, eds. Nova Science Publishers, Hauppauge, NY
    • Huang, F., and Leonard, B.R. (2008). Detection and monitoring of Bacillus thuringiensis resistance alleles in the sugarcane borer, Diatraea saccharalis (F.). In Genetically Modified Plants: New Research Trends, T.V. Wolf and J.P. Koch, eds. (Nova Science Publishers, Hauppauge, NY), pp. 1-17.
    • (2008) Genetically Modified Plants: New Research Trends , pp. 1-17
    • Huang, F.1    Leonard, B.R.2
  • 12
    • 33947280412 scopus 로고    scopus 로고
    • Sugarcane borer resistance to transgenic Bacillus thuringiensis-maize
    • Huang, F., Leonard, B.R., and Andow, D.A. (2007). Sugarcane borer resistance to transgenic Bacillus thuringiensis-maize. J Econ Entomol 100, 164-171.
    • (2007) J Econ Entomol , vol.100 , pp. 164-171
    • Huang, F.1    Leonard, B.R.2    Andow, D.A.3
  • 13
    • 33750285619 scopus 로고    scopus 로고
    • Comparative susceptibility of European corn borer, southwestern corn borer, and sugarcane borer (Lepidoptera: Crambidae) to Cry1Ab protein in a commercial Bacillus thuringiensis corn hybrid
    • Huang, F., Leonard, B.R., and Gable, R.H. (2006). Comparative susceptibility of European corn borer, southwestern corn borer, and sugarcane borer (Lepidoptera: Crambidae) to Cry1Ab protein in a commercial Bacillus thuringiensis corn hybrid. J Econ Entomol 99, 194-202.
    • (2006) J Econ Entomol , vol.99 , pp. 194-202
    • Huang, F.1    Leonard, B.R.2    Gable, R.H.3
  • 14
    • 58249093234 scopus 로고    scopus 로고
    • Frequency of resistance alleles to Bacillus thuringiensis-corn in Texas populations of the sugarcane borer, Diatraea saccharalis (F.) (Lepidoptera: Crambidae)
    • Huang, F.N., Parker, R., Leonard, R., Yong, Y.L., and Liu, J. (2009). Frequency of resistance alleles to Bacillus thuringiensis-corn in Texas populations of the sugarcane borer, Diatraea saccharalis (F.) (Lepidoptera: Crambidae). Crop Prot 28, 174-180.
    • (2009) Crop Prot , vol.28 , pp. 174-180
    • Huang, F.N.1    Parker, R.2    Leonard, R.3    Yong, Y.L.4    Liu, J.5
  • 15
    • 0034849408 scopus 로고    scopus 로고
    • MrBayes: Bayesian inference of phylogeny
    • Huelsenbeck, J.P., and Ronquist, F. (2001). MrBayes: Bayesian inference of phylogeny. Bioinformatics 17, 754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 16
    • 33645451073 scopus 로고    scopus 로고
    • The mitochondrial genome of the Korean hairstreak, Coreana ra-phaelis (Lepidoptera: Lycaenidae)
    • Kim, I., Lee, E.M., Seol, E.R., Yun, E.Y., and Lee, Y.B. (2006). The mitochondrial genome of the Korean hairstreak, Coreana ra-phaelis (Lepidoptera: Lycaenidae). Insect Mol Biol 15, 217-225.
    • (2006) Insect Mol Biol , vol.15 , pp. 217-225
    • Kim, I.1    Lee, E.M.2    Seol, E.R.3    Yun, E.Y.4    Lee, Y.B.5
  • 17
    • 3242810318 scopus 로고    scopus 로고
    • MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
    • Kumar, S., Tamura, K., and Nei, M. (2004). MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
    • (2004) Brief Bioinform , vol.5 , pp. 150-163
    • Kumar, S.1    Tamura, K.2    Nei, M.3
  • 18
    • 33646241532 scopus 로고    scopus 로고
    • The mitochondrial genome of the smaller tea tortix Adoxophyes honmai (Lepidoptera: Tortricidae)
    • Lee, E.S., Shin, K.S., Kim, M.S., Park, H., Cho, S., and Kim, C.B. (2006). The mitochondrial genome of the smaller tea tortix Adoxophyes honmai (Lepidoptera: Tortricidae). Gene 373, 52-57.
    • (2006) Gene , vol.373 , pp. 52-57
    • Lee, E.S.1    Shin, K.S.2    Kim, M.S.3    Park, H.4    Cho, S.5    Kim, C.B.6
  • 19
    • 0033766394 scopus 로고    scopus 로고
    • The mitochondrial genome of the primary screwworm fly Cochliomyia hominivorax (Diptera: Calli-phoridae)
    • Lessinger, A.C., Junqueira, T.A., Lemos, T.A., Kemper, E.L., and da Silva, F.R. (2000). The mitochondrial genome of the primary screwworm fly Cochliomyia hominivorax (Diptera: Calli-phoridae). Insect Mol Biol 9, 521-529.
    • (2000) Insect Mol Biol , vol.9 , pp. 521-529
    • Lessinger, A.C.1    Junqueira, T.A.2    Lemos, T.A.3    Kemper, E.L.4    Da Silva, F.R.5
  • 20
    • 0030854739 scopus 로고    scopus 로고
    • TRNAscan-SE: A program for improved detection of transfer RNA genes in genomic sequence
    • Lowe, T.M., and Eddy, S.R. (1997). tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acid Res 25, 955-964.
    • (1997) Nucleic Acid Res , vol.25 , pp. 955-964
    • Lowe, T.M.1    Eddy, S.R.2
  • 21
    • 77955773780 scopus 로고    scopus 로고
    • Geographic variation of sex pheromone and mito-chondrial DNA in Diatraea Saccharalis (Lepidoptera:Crambidae)
    • Epub ahead of print
    • Palacio, C., Zarbin, P., Takiya, D., Bento, J., Guidolin, A., and Con-soli, F. (2010). Geographic variation of sex pheromone and mito-chondrial DNA in Diatraea Saccharalis (Lepidoptera:Crambidae). J Insect Physiol [Epub ahead of print].
    • (2010) J Insect Physiol
    • Palacio, C.1    Zarbin, P.2    Takiya, D.3    Bento, J.4    Guidolin, A.5    Con-Soli, F.6
  • 22
    • 0031773680 scopus 로고    scopus 로고
    • Model test: Testing the model of DNA substitution
    • Posada, D., and Crandal, K.A. (1998). Model test: testing the model of DNA substitution. Bioinformatics 14, 817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandal, K.A.2
  • 23
    • 0034883153 scopus 로고    scopus 로고
    • Increased rate of gene rearrangement in the mitochondrial genome of three orders of hemipteroid insects
    • Shao, R., Campbell, N.J., Schmidt, E.R., and Barker, S.C. (2001). Increased rate of gene rearrangement in the mitochondrial genome of three orders of hemipteroid insects. Mol Biol Evol 18, 1828-1832.
    • (2001) Mol Biol Evol , vol.18 , pp. 1828-1832
    • Shao, R.1    Campbell, N.J.2    Schmidt, E.R.3    Barker, S.C.4
  • 24
    • 0028251187 scopus 로고
    • Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers
    • Simon, C., Frati, F., Beckenbach, A., Crespi, B., Liu, H., and Flook, P. (1994). Evolution, weighting, and phylogenetic utility of mitochondrial gene sequences and a compilation of conserved polymerase chain reaction primers. Ann Entomol Soc Am 87, 651-701.
    • (1994) Ann Entomol Soc Am , vol.87 , pp. 651-701
    • Simon, C.1    Frati, F.2    Beckenbach, A.3    Crespi, B.4    Liu, H.5    Flook, P.6
  • 26
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J.D., Gibson, T.J., Plewniak, F., Jeanmougin, F., and Higgins, D.G. (1997). The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acid Res 24, 173-216.
    • (1997) Nucleic Acid Res , vol.24 , pp. 173-216
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 27
    • 38049174301 scopus 로고    scopus 로고
    • Evaluation of transgenic Bacillus thuringiensis corn hybrids against Cry1Ab-susceptible and -resistant sugarcane borer (Lepi-optera: Crambidae)
    • Wu, X., Huang, F., Leonard, B.R., and Moore, S.H. (2007). Evaluation of transgenic Bacillus thuringiensis corn hybrids against Cry1Ab-susceptible and -resistant sugarcane borer (Lepi-doptera: Crambidae). J Econ Entomol 100, 1880-1886.
    • (2007) J Econ Entomol , vol.100 , pp. 1880-1886
    • Wu, X.1    Huang, F.2    Leonard, B.R.3    Moore, S.H.4
  • 28
    • 53849143965 scopus 로고    scopus 로고
    • Verifying an F1 screen for identification and quantification of rare Bacillus thuringiensis resistance alleles in field populations of sugarcane borer (Lepidoptera: Crambidae)
    • Yue, B.S., Huang, F., Leonard, B.R., Moore, S.H., Parker, R., Andow, D.A., Cook, D.R., Emfinger, K., and Lee, D.R. (2008). Verifying an F1 screen for identification and quantification of rare Bacillus thuringiensis resistance alleles in field populations of sugarcane borer (Lepidoptera: Crambidae). Entomol Exp Appl 129, 172-180.
    • (2008) Entomol Exp Appl , vol.129 , pp. 172-180
    • Yue, B.S.1    Huang, F.2    Leonard, B.R.3    Moore, S.H.4    Parker, R.5    Andow, D.A.6    Cook, D.R.7    Emfinger, K.8    Lee, D.R.9
  • 29
    • 0036667701 scopus 로고    scopus 로고
    • Significant levels of sequence divergence and gene rearrangements have occurred between the mitochondrial genomes of the wild mulberry silk moth, Bombyx mandarina, and its close relative, the domesticated silk moth, Bombyx mori
    • Yukuhiro, K., Sezutsu, H., Itoh, M., Shimizu, K., and Banno, Y. (2002). Significant levels of sequence divergence and gene rearrangements have occurred between the mitochondrial genomes of the wild mulberry silk moth, Bombyx mandarina, and its close relative, the domesticated silk moth, Bombyx mori. Mol Biol Evol 19, 1385-1389.
    • (2002) Mol Biol Evol , vol.19 , pp. 1385-1389
    • Yukuhiro, K.1    Sezutsu, H.2    Itoh, M.3    Shimizu, K.4    Banno, Y.5
  • 30
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker, M. (2003). Mfold web server for nucleic acid folding and hybridization prediction. Nucl Acid Res 31, 3406-3415.
    • (2003) Nucl Acid Res , vol.31 , pp. 3406-3415
    • Zuker, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.