Genomic signatures predict migration and spawning failure in wild canadian salmon

Science

Volumn 331, Issue 6014, 2011, Pages 214-217

  Miller, Kristina M ^a,b   Li, Shaorong ^a   Kaukinen, Karia H ^a   Ginther, Norma ^a   Hammil, Edd ^a   Curtis, Janelle M R ^c   Patterson, David A ^c   Sierocinski, Thomas ^b   Donnison, Louise ^b   Pavlidis, Paul ^b   Hinch, Scott G ^b   Hruska, Kimberly A ^b   Cooke, Steven J ^d   English, Karl K ^e   Farrell, Anthony P ^b  

^a PACIFIC BIOLOGICAL STATION   (Canada)

^b UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^c SIMON FRASER UNIVERSITY   (Canada)

^d CARLETON UNIVERSITY   (Canada)

^e LGL LIMITED   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

GENOMICS; LONG-TERM CHANGE; MORTALITY; SALMONID; SPAWNING; SPAWNING GROUND; STOCKING DENSITY; SURVIVAL; VIABILITY;

ANIMAL EXPERIMENT; ARTICLE; CORRELATION ANALYSIS; DYING; GENOMICS; MORTALITY; NONHUMAN; POPULATION MIGRATION; PRIORITY JOURNAL; RIVER; SALMON; SEA; SPAWNING; SURVIVAL RATE; VIRUS INFECTION;

ANIMAL MIGRATION; ANIMALS; CANADA; FEMALE; FISH DISEASES; GENE EXPRESSION; GENE EXPRESSION PROFILING; GENOME; GILLS; MALE; MORTALITY; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PACIFIC OCEAN; POPULATION DYNAMICS; PRINCIPAL COMPONENT ANALYSIS; REMOTE SENSING TECHNOLOGY; REPRODUCTION; RIVERS; SALMON; STRESS, PHYSIOLOGICAL; SURVIVAL ANALYSIS; VIRUS DISEASES;

ONCORHYNCHUS NERKA;

EID: 78651434647     PISSN: 00368075     EISSN: 10959203     Source Type: Journal    
DOI: 10.1126/science.1196901     Document Type: Article

References (21)

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21. Microarray data were deposited (according to Microarray Gene Expression Data Society Standard) in the National Center for Biotechnology Information Gene Expression Omnibus (GEO, www.ncbi.nlm.nih.gov/geo/) with the saltwater experimental accession number GSE22171, freshwater GSE22177, spawning GSE22347, and Superseries ID GSE22179. We thank the Pacific Salmon Commission Southern Endowment Fund, Department of Fisheries and Oceans Genomics Research and Development Fund, Genome British Columbia, and Natural Sciences and Engineering Research Council of Canada for research support. All procedures used were developed with approvals and guidance from the Canadian Council on Animal Care administered by the University of British Columbia and Fisheries and Oceans Canada. We thank M. Donaldson, I. Olsson, G. Crossin, K. Hanson, R. Alexander, D. Robichaud, S. Tyerman, D. Welch, and J. Hills for tagging and biopsies; L. Stenhouse and A. Schulze for RNA extractions; M. Shrimpton for gill Na+/K+ ATPase activity levels; C. Wallace for figure preparation; M. Lapointe and C. McConnell for organizational assistance; and the skippers and crews of the ocean vessels Sunfisher and Belina.