-
1
-
-
84957002571
-
Exploring the set of all minimal sequences of reversals - An application to test the replication-directed reversal hypothesis
-
Guigó, R., Gusfield, D. (eds.). Springer, Heidelberg
-
Ajana, Y., Lefebvre, J.-F., Tillier, E.R.M., El-Mabrouk, N.: Exploring the set of all minimal sequences of reversals - an application to test the replication-directed reversal hypothesis. In: Guigó, R., Gusfield, D. (eds.) WABI 2002. LNCS, vol. 2452, p. 300. Springer, Heidelberg (2002)
-
(2002)
WABI 2002. LNCS
, vol.2452
, pp. 300
-
-
Ajana, Y.1
Lefebvre, J.-F.2
Tillier, E.R.M.3
El-Mabrouk, N.4
-
2
-
-
0346397785
-
Random generation of trees and other combinatorial objects
-
Barcucci, E., del Lungo, A., Pergola, E.: Random generation of trees and other combinatorial objects. Theoretical Computer Science 218(2), 219-232 (1999)
-
(1999)
Theoretical Computer Science
, vol.218
, Issue.2
, pp. 219-232
-
-
Barcucci, E.1
Del Lungo, A.2
Pergola, E.3
-
3
-
-
33847756694
-
Perfect sorting by reversals is not always difficult
-
Bérard, S., Bergeron, A., Chauve, C., Paul, C.: Perfect sorting by reversals is not always difficult. IEEE/ACM Transactions on Computational Biology and Bioinformatics 4(1), 4-16 (2007)
-
(2007)
IEEE/ACM Transactions on Computational Biology and Bioinformatics
, vol.4
, Issue.1
, pp. 4-16
-
-
Bérard, S.1
Bergeron, A.2
Chauve, C.3
Paul, C.4
-
4
-
-
15344349176
-
On the properties of sequences of reversals that sort a signed permutation
-
Bergeron, A., Chauve, C., Hartman, T., St-onge, K.: On the properties of sequences of reversals that sort a signed permutation. In: Proceedings Troisièmes Journées Ouvertes Biologie Informatique Mathématiques, pp. 99-108 (2002)
-
(2002)
Proceedings Troisièmes Journées Ouvertes Biologie Informatique Mathématiques
, pp. 99-108
-
-
Bergeron, A.1
Chauve, C.2
Hartman, T.3
St-Onge, K.4
-
5
-
-
33750264868
-
A unifying view of genome rearrangements
-
Bücher, P., Moret, B.M.E. (eds.). Springer, Heidelberg
-
Bergeron, A., Mixtacki, J., Stoye, J.: A unifying view of genome rearrangements. In: Bücher, P., Moret, B.M.E. (eds.) WABI 2006. LNCS (LNBI), vol. 4175, pp. 163-173. Springer, Heidelberg (2006)
-
(2006)
WABI 2006. LNCS (LNBI)
, vol.4175
, pp. 163-173
-
-
Bergeron, A.1
Mixtacki, J.2
Stoye, J.3
-
6
-
-
49249120896
-
Exploring the solution space of sorting by reversals, with experiments and an application to evolution
-
Braga, M.D.V., Sagot, M.-F., Scornavacca, C., Tannier, E.: Exploring the solution space of sorting by reversals, with experiments and an application to evolution. IEEE/ACM Transactions on Computational Biology and Bioinformatics 5(3), 348-356 (2008)
-
(2008)
IEEE/ACM Transactions on Computational Biology and Bioinformatics
, vol.5
, Issue.3
, pp. 348-356
-
-
Braga, M.D.V.1
Sagot, M.-F.2
Scornavacca, C.3
Tannier, E.4
-
7
-
-
34248356749
-
Evolution under reversals: Parsimony and conservation of common intervals
-
Diekmann, Y., Sagot, M.-F., Tannier, E.: Evolution under reversals: Parsimony and conservation of common intervals. IEEE/ACM Transactions on Computational Biology and Bioinformatics 4(2), 301-309 (2007)
-
(2007)
IEEE/ACM Transactions on Computational Biology and Bioinformatics
, vol.4
, Issue.2
, pp. 301-309
-
-
Diekmann, Y.1
Sagot, M.-F.2
Tannier, E.3
-
10
-
-
0002617971
-
High frequency of inversions during eukaryote gene order evolution
-
Kluwer Academic Press, Dordrecht
-
McLysaght, A., Seoighe, C., Wolfe, K.H.: High frequency of inversions during eukaryote gene order evolution. In: Comparative Genomics: Empirical and Analytical Approaches to Gene Order Dynamics, Map Alignment and the Evolution of Gene Families, pp. 47-58. Kluwer Academic Press, Dordrecht (2000)
-
(2000)
Comparative Genomics: Empirical and Analytical Approaches to Gene Order Dynamics, Map Alignment and the Evolution of Gene Families
, pp. 47-58
-
-
McLysaght, A.1
Seoighe, C.2
Wolfe, K.H.3
-
11
-
-
77958042099
-
Efficient sampling of parsimonious inversion histories with application to genome rearrangement in yersinia
-
Miklós, I., Darling, A.: Efficient sampling of parsimonious inversion histories with application to genome rearrangement in yersinia. Genome Biology and Evolution 1(1), 153-164 (2009)
-
(2009)
Genome Biology and Evolution
, vol.1
, Issue.1
, pp. 153-164
-
-
Miklós, I.1
Darling, A.2
-
12
-
-
26444445736
-
Genome rearrangement in mitochondria and its computational biology
-
Lagergren, J. (ed.). Springer, Heidelberg
-
Miklós, I., Hein, J.: Genome rearrangement in mitochondria and its computational biology. In: Lagergren, J. (ed.) RECOMB-WS 2004. LNCS (LNBI), vol. 3388, pp. 85-96. Springer, Heidelberg (2005)
-
(2005)
RECOMB-WS 2004. LNCS (LNBI)
, vol.3388
, pp. 85-96
-
-
Miklós, I.1
Hein, J.2
-
14
-
-
0038271921
-
Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution
-
Pevzner, P., Tesler, G.: Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution. Proceedings of National Academy of Sciences USA 100(13), 7672-7677 (2003)
-
(2003)
Proceedings of National Academy of Sciences USA
, vol.100
, Issue.13
, pp. 7672-7677
-
-
Pevzner, P.1
Tesler, G.2
-
15
-
-
26444545100
-
The distribution of inversion lengths in bacteria
-
Lagergren, J. (ed.). Springer, Heidelberg
-
Sankoff, D., Lefebvre, J.-F., Tillier, E.R.M., Maler, A., El-Mabrouk, N.: The distribution of inversion lengths in bacteria. In: Lagergren, J. (ed.) RECOMB-WS 2004. LNCS (LNBI), vol. 3388, pp. 97-108. Springer, Heidelberg (2005)
-
(2005)
RECOMB-WS 2004. LNCS (LNBI)
, vol.3388
, pp. 97-108
-
-
Sankoff, D.1
Lefebvre, J.-F.2
Tillier, E.R.M.3
Maler, A.4
El-Mabrouk, N.5
-
16
-
-
23844460187
-
Chromosomal breakpoint reuse in genome sequence rearrangement
-
Sankoff, D., Trinh, P.: Chromosomal breakpoint reuse in genome sequence rearrangement. Journal of Computational Biology 12(6), 812-821 (2005)
-
(2005)
Journal of Computational Biology
, vol.12
, Issue.6
, pp. 812-821
-
-
Sankoff, D.1
Trinh, P.2
-
18
-
-
0003652674
-
-
Wadsworth and Brookes/Cole, Monterey, California
-
Stanley, R.P.: Enumerative Combinatorics, vol. I. Wadsworth and Brookes/Cole, Monterey, California (1986)
-
(1986)
Enumerative Combinatorics
, vol.1
-
-
Stanley, R.P.1
-
19
-
-
0347413370
-
Parking functions and noncrossing partitions
-
Stanley, R.P.: Parking functions and noncrossing partitions. Electronic Journal of Combinatorics 4(2), R20 (1997)
-
(1997)
Electronic Journal of Combinatorics
, vol.4
, Issue.2
-
-
Stanley, R.P.1
-
20
-
-
0003652674
-
-
Cambridge University Press, Cambridge
-
Stanley, R.P.: Enumerative Combinatorics, vol. II. Cambridge University Press, Cambridge (1999)
-
(1999)
Enumerative Combinatorics
, vol.2
-
-
Stanley, R.P.1
-
21
-
-
78651238879
-
Maximum independent sets of commuting and noninterfering inversions
-
to appear
-
Swenson, K.M., Dong, Y., Tang, J., Moret, B.M.E.: Maximum independent sets of commuting and noninterfering inversions. In: 7th Asia-Pacific Bioinformatics Conference ( to appear, 2009)
-
(2009)
7th Asia-Pacific Bioinformatics Conference
-
-
Swenson, K.M.1
Dong, Y.2
Tang, J.3
Moret, B.M.E.4
-
22
-
-
34250359911
-
Paths and cycles in breakpoint graphs of random multichromosomal genomes
-
Xu, A.W., Zheng, C., Sankoff, D.: Paths and cycles in breakpoint graphs of random multichromosomal genomes. Journal of Computational Biology 14(4), 423-435 (2007)
-
(2007)
Journal of Computational Biology
, vol.14
, Issue.4
, pp. 423-435
-
-
Xu, A.W.1
Zheng, C.2
Sankoff, D.3
-
23
-
-
24044535485
-
Efficient sorting of genomic permutations by translocation, inversion and block interchange
-
Yancopoulos, S., Attie, O., Friedberg, R.: Efficient sorting of genomic permutations by translocation, inversion and block interchange. Bioinformatics 21(16), 3340-3346 (2005)
-
(2005)
Bioinformatics
, vol.21
, Issue.16
, pp. 3340-3346
-
-
Yancopoulos, S.1
Attie, O.2
Friedberg, R.3
|