Anaerobic crystallization and initial X-ray diffraction data of biphenyl 2,3-dioxygenase from Burkholderia xenovorans LB400: Addition of agarose improved the quality of the crystals

Acta Crystallographica Section F: Structural Biology and Crystallization Communications

Volumn 67, Issue 1, 2011, Pages 59-63

  Kumar, Pravindra ^a,b   Gómez Gil, Leticia ^c   Mohammadi, Mahmood ^d   Sylvestre, Michel ^d   Eltis, Lindsay D ^c   Bolin, Jeffrey T ^a  

^a PURDUE UNIVERSITY   (United States)

^b INDIAN INSTITUTE OF TECHNOLOGY ROORKEE   (India)

^c UNIVERSITY OF BRITISH COLUMBIA   (Canada)

^d INRS INSTITUT ARMAND FRAPPIER   (Canada)

Author keywords

agarose gel; biphenyl 2,3 dioxygenase; Burkholderia xenovorans LB400

Indexed keywords

BACTERIAL PROTEIN; BIPHENYL 2,3 DIOXYGENASE; BIPHENYL-2,3-DIOXYGENASE; IRON SULFUR PROTEIN; OXYGENASE; SEPHAROSE;

ANAEROBIC GROWTH; ARTICLE; BURKHOLDERIA; CHEMISTRY; CRYSTALLIZATION; ENZYMOLOGY; METHODOLOGY; MOLECULAR GENETICS; X RAY CRYSTALLOGRAPHY;

ANAEROBIOSIS; BACTERIAL PROTEINS; BURKHOLDERIA; CRYSTALLIZATION; CRYSTALLOGRAPHY, X-RAY; IRON-SULFUR PROTEINS; MOLECULAR SEQUENCE DATA; OXYGENASES; SEPHAROSE;

BURKHOLDERIA XENOVORANS; PROTEOBACTERIA;

EID: 78650862965     PISSN: 17443091     EISSN: 17443091     Source Type: Journal    
DOI: 10.1107/S1744309110043393     Document Type: Article

References (25)

1. Barriault, D., Plante, M. M. & Sylvestre, M. (2002). J. Bacteriol. 184, 3794-3800.
2. Barriault, D. & Sylvestre, M. (2004). J. Biol. Chem. 279, 47480-47488.
3. Bedard, D. L., Unterman, R., Bopp, L. H., Brennan, M. J., Haberl, M. L. & Johnson, C. (1986). Appl. Environ. Microbiol. 51, 761-768.
4. Cudney, R., Patel, S. & McPherson, A. (1994). Acta Cryst. D50, 479-483.
5. Ducruix, A. & Giegé, R. (1999). Crystallization ofNucleic Acids and Proteins: A Practical Approach. Oxford University Press.
6. Erickson, B. D. & Mondello, F. J. (1993). Appl. Environ. Microbiol. 59, 3858-3862.
7. Furukawa, K. (2000). J. Gen. Appl. Microbiol. 46, 283-296.
8. Garća-Ruiz, J. M., Novella, M. L., Moreno, R. & Gavira, J. A. (2001). J. Cryst. Growth, 232, 165-172.
9. Gavira, J. A. & Garća-Ruiz, J. M. (2002). Acta Cryst. D58, 1653-1656.
10. Gómez-Gil, L., Kumar, P., Barriault, D., Bolin, J. T., Sylvestre, M. & Eltis, L. D. (2007). J. Bacteriol. 189, 5705-5715.
11. Haddock, J. D., Horton, J. R. & Gibson, D. T. (1995). J. Bacteriol. 177, 20-26.
12. Hurtubise, Y., Barriault, D. & Sylvestre, M. (1996). J. Biol. Chem. 271, 8152-8156.
13. Matthews, B. W. (1968). J. Mol. Biol. 33, 491-497.
14. McPherson, A. (1999). Crystallization of Biological Macromolecules, p. 586. New York: Cold Spring Harbor Laboratory Press.
15. Miroux, B. & Walker, J. E. (1996). J. Mol. Biol. 260, 289-298.
16. Mohammadi, M., Chalavi, V., Novakova-Sura, M., Laliberté, J. F. & Sylvestre, M. (2007). Biotechnol. Bioeng. 97, 496-505.
17. Mohammadi, M. & Sylvestre, M. (2005). Chem. Biol. 12, 835-846.
18. Mondello, F J., Turcich, M. P., Lobos, J. H. & Erickson, B. D. (1997). Appl. Environ. Microbiol. 63, 3096-3103.
19. Otwinowski, Z. & Minor, W. (1997). Methods Enzymol. 276, 307-326.
20. Provost, K. & Robert, M. C. (1991). J. Cryst. Growth, 110, 258-264.
21. Robert, M. C. & Lefaucheux, F (1988). J. Cryst. Growth, 90, 358-367.
22. Seeger, M., Timmis, K. N. & Hofer, B. (1995a). Appl. Environ. Microbiol. 61, 2654-2658.
23. Seeger, M., Timmis, K. N. & Hofer, B. (1995b). FEMS Microbiol. Lett. 133, 259-264.
24. Vaillancourt, F H., Han, S., Fortin, P. D., Bolin, J. T. & Eltis, L. D. (1998). J. Biol. Chem. 273, 34887-34895.
25. Zhu, D.-W., Lorber, B., Sauter, C., Ng, J. D., Bénas, P., Le Grimellec, C. & Giegé, R. (2001). Acta Cryst. D57, 552-558.