-
2
-
-
13244292328
-
Computation of elementary modes: A unifying framework and the new binary approach
-
Gagneur, J., Klamt, S.: Computation of elementary modes: a unifying framework and the new binary approach. BMC Bioinformatics 5 (2004)
-
(2004)
BMC Bioinformatics
, vol.5
-
-
Gagneur, J.1
Klamt, S.2
-
3
-
-
34047216368
-
Dynamic simulations on the arachidonic acid metabolic network
-
Yang, K., Ma, W., Liang, H., Ouyang, Q., Tang, C., Lai, L.: Dynamic simulations on the arachidonic acid metabolic network. PLoS Comput. Biol. 3, e55 (2007)
-
(2007)
PLoS Comput. Biol.
, vol.3
-
-
Yang, K.1
Ma, W.2
Liang, H.3
Ouyang, Q.4
Tang, C.5
Lai, L.6
-
4
-
-
33747061013
-
Structural kinetic modeling of metabolic networks
-
Steuer, R., Gross, T., Selbig, J., Blasius, B.: Structural kinetic modeling of metabolic networks. Proc. Natl. Acad. Sci. 103, 11868-11873 (2006)
-
(2006)
Proc. Natl. Acad. Sci.
, vol.103
, pp. 11868-11873
-
-
Steuer, R.1
Gross, T.2
Selbig, J.3
Blasius, B.4
-
5
-
-
56949085134
-
The origin and evolution of modern metabolism
-
Caetano-Anollés, G., Yafremava, L.S., Gee, H., Caetano-Anollés, D., Kim, H.S., Mittenthal, J.E.: The origin and evolution of modern metabolism. The International Journal of Biochemistry & Cell Biology 41, 285-297 (2009)
-
(2009)
The International Journal of Biochemistry & Cell Biology
, vol.41
, pp. 285-297
-
-
Caetano-Anollés, G.1
Yafremava, L.S.2
Gee, H.3
Caetano-Anollés, D.4
Kim, H.S.5
Mittenthal, J.E.6
-
6
-
-
57049104032
-
Functional evolution of ribozyme-catalyzed metabolisms in a graph-based toy-universe
-
Heiner, M., Uhrmacher, A.M. (eds.) CMSB 2008. Springer, Heidelberg
-
Ullrich, A., Flamm, C.: Functional evolution of ribozyme-catalyzed metabolisms in a graph-based toy-universe. In: Heiner, M., Uhrmacher, A.M. (eds.) CMSB 2008. LNCS (LNBI), vol. 5307, pp. 28-43. Springer, Heidelberg (2008)
-
(2008)
LNCS (LNBI)
, vol.5307
, pp. 28-43
-
-
Ullrich, A.1
Flamm, C.2
-
7
-
-
77951548790
-
A novel grid-based visualization approach for metabolic networks with advanced focus & context view
-
Eppstein, D., Gansner, E.R. (eds.) GD 2009. Springer, Heidelberg
-
Rohrschneider, M., Heine, C., Reichenbach, A., Kerren, A., Scheuermann, G.: A novel grid-based visualization approach for metabolic networks with advanced focus & context view. In: Eppstein, D., Gansner, E.R. (eds.) GD 2009. LNCS, vol. 5849, pp. 268-279. Springer, Heidelberg (2010)
-
(2010)
LNCS
, vol.5849
, pp. 268-279
-
-
Rohrschneider, M.1
Heine, C.2
Reichenbach, A.3
Kerren, A.4
Scheuermann, G.5
-
8
-
-
84871777148
-
-
Human-Centered Visualization Environments. Springer, Heidelberg
-
Kerren, A., Ebert, A., Meyer, J. (eds.): Human-Centered Visualization Environments. LNCS, vol. 4417. Springer, Heidelberg (2007)
-
(2007)
LNCS
, vol.4417
-
-
Kerren, A.1
Ebert, A.2
Meyer, J.3
-
9
-
-
0004061989
-
-
Prentice Hall, New Jersey
-
Di Battista, G., Eades, P., Tamassia, R., Tollis, I.G.: Graph Drawing: Algorithms for the Visualization of Graphs. Prentice Hall, New Jersey (1999)
-
(1999)
Graph Drawing: Algorithms for the Visualization of Graphs
-
-
Di Battista, G.1
Eades, P.2
Tamassia, R.3
Tollis, I.G.4
-
10
-
-
38049115211
-
-
[8]
-
Görg, C., Pohl, M., Qeli, E., Xu, K.: Visual Representations. In: [8], pp. 163-230
-
Visual Representations
, pp. 163-230
-
-
Görg, C.1
Pohl, M.2
Qeli, E.3
Xu, K.4
-
11
-
-
33847320742
-
Dynamic exploration and editing of KEGG pathway diagrams
-
DOI 10.1093/bioinformatics/btl611
-
Klukas, C., Schreiber, F.: Dynamic exploration and editing of KEGG pathway diagrams. Bioinformatics 23, 344-350 (2007) (Pubitemid 46323157)
-
(2007)
Bioinformatics
, vol.23
, Issue.3
, pp. 344-350
-
-
Klukas, C.1
Schreiber, F.2
-
12
-
-
0028013807
-
The table lens: Merging graphical and symbolic representations in an interactive focus+context visualization for tabular information
-
ACM, New York
-
Rao, R., Card, S.K.: The table lens: merging graphical and symbolic representations in an interactive focus+context visualization for tabular information. In: Conference Companion on Human Factors in Computing Systems, CHI 1994, p. 222. ACM, New York (1994)
-
(1994)
Conference Companion on Human Factors in Computing Systems, CHI 1994
, pp. 222
-
-
Rao, R.1
Card, S.K.2
-
13
-
-
77951540298
-
On open problems in biological network visualization
-
Eppstein, D., Gansner, E.R. (eds.) GD 2009. Springer, Heidelberg
-
Albrecht, M., Kerren, A., Klein, K., Kohlbacher, O., Mutzel, P., Paul, W., Schreiber, F., Wybrow, M.: On open problems in biological network visualization. In: Eppstein, D., Gansner, E.R. (eds.) GD 2009. LNCS, vol. 5849, pp. 256-267. Springer, Heidelberg (2010)
-
(2010)
LNCS
, vol.5849
, pp. 256-267
-
-
Albrecht, M.1
Kerren, A.2
Klein, K.3
Kohlbacher, O.4
Mutzel, P.5
Paul, W.6
Schreiber, F.7
Wybrow, M.8
-
14
-
-
33645735456
-
From enzyme kinetics to metabolic network modeling - Visualization tool for enhanced kinetic analysis of biochemical network models
-
Oldiges, M., Noack, S., Wahl, A., Qeli, E., Freisleben, B., Wiechert, W.: From enzyme kinetics to metabolic network modeling - visualization tool for enhanced kinetic analysis of biochemical network models. Eng. Life Sci. 6 (2006)
-
(2006)
Eng. Life Sci.
, vol.6
-
-
Oldiges, M.1
Noack, S.2
Wahl, A.3
Qeli, E.4
Freisleben, B.5
Wiechert, W.6
-
15
-
-
8844244248
-
Dynamic graph drawing
-
London, UK, Springer, Heidelberg
-
Branke, J.: Dynamic graph drawing. In: Drawing Graphs: Methods and Models, London, UK, pp. 228-246. Springer, Heidelberg (2001)
-
(2001)
Drawing Graphs: Methods and Models
, pp. 228-246
-
-
Branke, J.1
-
16
-
-
0001633699
-
Layout adjustment and the mental map
-
Misue, K., Eades, P., Lai, W., Sugiyama, K.: Layout adjustment and the mental map. Journal of Visual Languages and Computing 6, 183-210 (1995)
-
(1995)
Journal of Visual Languages and Computing
, vol.6
, pp. 183-210
-
-
Misue, K.1
Eades, P.2
Lai, W.3
Sugiyama, K.4
-
17
-
-
16244366316
-
Preserving the mental map using foresighted layout
-
Springer, Heidelberg
-
Diehl, S., Görg, C., Kerren, A.: Preserving the mental map using foresighted layout. In: Proc. of Joint Eurographics-IEEE TVCG Symp. on Vis., VisSym 2001, pp. 175-184. Springer, Heidelberg (2001)
-
(2001)
Proc. of Joint Eurographics-IEEE TVCG Symp. on Vis., VisSym 2001
, pp. 175-184
-
-
Diehl, S.1
Görg, C.2
Kerren, A.3
-
18
-
-
44649087050
-
Online dynamic graph drawing
-
Frishman, Y., Tal, A.: Online dynamic graph drawing. IEEE TVCG 14, 727-740 (2008)
-
(2008)
IEEE TVCG
, vol.14
, pp. 727-740
-
-
Frishman, Y.1
Tal, A.2
-
19
-
-
34249000244
-
Exploratory visualization with multiple linked views
-
MacEachren, A., Kraak, M.J., Dykes, J. (eds.) Elseviers, Amsterdam
-
Roberts, J.C.: Exploratory visualization with multiple linked views. In: MacEachren, A., Kraak, M.J., Dykes, J. (eds.) Exploring Geovisualization. Elseviers, Amsterdam (2004)
-
(2004)
Exploring Geovisualization
-
-
Roberts, J.C.1
-
21
-
-
0035412791
-
Stochastic generator of chemical structure. 3. Reaction network generation
-
Faulon, J.L., Sault, A.G.: Stochastic generator of chemical structure. 3. Reaction network generation. J. Chem. Inf. Comp. Sci. 41, 894-908 (2001)
-
(2001)
J. Chem. Inf. Comp. Sci.
, vol.41
, pp. 894-908
-
-
Faulon, J.L.1
Sault, A.G.2
-
22
-
-
8544254107
-
Structural determination of paraffin boiling points
-
Wiener, H.: Structural determination of paraffin boiling points. Journal of the American Chemical Society 69, 17-20 (1947)
-
(1947)
Journal of the American Chemical Society
, vol.69
, pp. 17-20
-
-
Wiener, H.1
-
23
-
-
84891432000
-
A sequence-to-function map for ribozyme-catalyzed metabolisms
-
ECAL. Springer, Heidelberg
-
Ullrich, A., Flamm, C.: A sequence-to-function map for ribozyme-catalyzed metabolisms. In: ECAL. LNCS, vol. 5777. Springer, Heidelberg (2009)
-
(2009)
LNCS
, vol.5777
-
-
Ullrich, A.1
Flamm, C.2
-
24
-
-
84867449032
-
Graphml progress report: Structural layer proposal
-
Mutzel, P., Jünger, M., Leipert, S. (eds.) GD 2001. Springer, Heidelberg
-
Brandes, U., Eiglsperger, M., Herman, I., Himsolt, M., Marshall, M.S.: Graphml progress report: Structural layer proposal. In: Mutzel, P., Jünger, M., Leipert, S. (eds.) GD 2001. LNCS, vol. 2265, pp. 501-512. Springer, Heidelberg (2002)
-
(2002)
LNCS
, vol.2265
, pp. 501-512
-
-
Brandes, U.1
Eiglsperger, M.2
Herman, I.3
Himsolt, M.4
Marshall, M.S.5
-
25
-
-
0023965741
-
SMILES, a chemical language and information system. 1. Introduction to methodology and encoding rules
-
Weininger, D.: SMILES, a chemical language and information system. 1. introduction to methodology and encoding rules. J. Chem. Inf. Comput. Sci. 28, 31-36 (1988)
-
(1988)
J. Chem. Inf. Comput. Sci.
, vol.28
, pp. 31-36
-
-
Weininger, D.1
-
26
-
-
0019530043
-
Methods for visual understanding of hierarchical systems
-
Sugiyama, K., Tagawa, S., Toda, M.: Methods for visual understanding of hierarchical systems. IEEE Trans. Systems, Man, and Cybernetics 11, 109-125 (1981)
-
(1981)
IEEE Trans. Systems, Man, and Cybernetics
, vol.11
, pp. 109-125
-
-
Sugiyama, K.1
Tagawa, S.2
Toda, M.3
-
27
-
-
0027553807
-
A technique for drawing directed graphs
-
Gansner, E.R., Koutsofios, E., North, S.C.,Vo, K.P.: A technique for drawing directed graphs. IEEE Trans. Software Eng. 19, 214-230 (1993)
-
(1993)
IEEE Trans. Software Eng.
, vol.19
, pp. 214-230
-
-
Gansner, E.R.1
Koutsofios, E.2
North, S.C.3
Vo, K.P.4
-
28
-
-
0029725135
-
The eyes have it: A task by data type taxonomy for information visualizations
-
Shneiderman, B.: The eyes have it: A task by data type taxonomy for information visualizations. In: VL, pp. 336-343 (1996)
-
(1996)
VL
, pp. 336-343
-
-
Shneiderman, B.1
-
29
-
-
0001260894
-
On the evolution of biochemical syntheses
-
Horowitz, N.H.: On the evolution of biochemical syntheses. Proc. Natl. Acad. Sci. USA 31, 153-157 (1945)
-
(1945)
Proc. Natl. Acad. Sci. USA
, vol.31
, pp. 153-157
-
-
Horowitz, N.H.1
-
31
-
-
0017272554
-
Enzyme recruitment in evolution of new function
-
Jensen, R.A.: Enzyme recruitment in evolution of new function. Annu. Rev. Microbiol. 30, 409-425 (1976)
-
(1976)
Annu. Rev. Microbiol.
, vol.30
, pp. 409-425
-
-
Jensen, R.A.1
|