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Volumn 5, Issue 12, 2010, Pages 1-9

Evolutionary History and Population Dynamics of Hepatitis E Virus

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CONTROLLED STUDY; EFFECTIVE POPULATION SIZE; EVOLUTIONARY ADAPTATION; GENOTYPE; HEPATITIS E VIRUS; MOLECULAR EVOLUTION; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; POPULATION DYNAMICS; SEQUENCE ANALYSIS; VIRAL GENETICS; VIRUS TRANSMISSION; ANIMAL; BAYES THEOREM; CLUSTER ANALYSIS; GENETICS; HEPATITIS E; HUMAN; PHYLOGENY; POPULATION GENETICS; SPECIES DIFFERENCE; VIROLOGY;

EID: 78650754735     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0014376     Document Type: Article
Times cited : (99)

References (42)
  • 2
    • 40549122323 scopus 로고    scopus 로고
    • Hepatitis E Virus: Molecular Virology, Clinical Features, Diagnosis, Transmission, Epidemiology, and Prevention
    • Mushahwar IK (2008) Hepatitis E Virus: Molecular Virology, Clinical Features, Diagnosis, Transmission, Epidemiology, and Prevention. J Med Virol 80: 646-658.
    • (2008) J Med Virol , vol.80 , pp. 646-658
    • Mushahwar, I.K.1
  • 3
    • 78650750758 scopus 로고
    • Hepatitis E virus: Epidemiology, natural history and experimental models
    • In: Zuckerman AJ, Thomas HC, eds, Avon: Churchill Livingstone
    • Bradley DW, Krawczynski K, Purdy MA (1993) Hepatitis E virus: epidemiology, natural history and experimental models. In: Zuckerman AJ, Thomas HC, eds. Viral hepatitis: scientific basis and clinical management. Avon: Churchill Livingstone. pp 379-383.
    • (1993) Viral hepatitis: Scientific basis and clinical management , pp. 379-383
    • Bradley, D.W.1    Krawczynski, K.2    Purdy, M.A.3
  • 4
    • 34447327236 scopus 로고    scopus 로고
    • Genetic variability and evolution of hepatitis E virus
    • Okamoto H (2007) Genetic variability and evolution of hepatitis E virus. Virus Res 127: 216-228.
    • (2007) Virus Res , vol.127 , pp. 216-228
    • Okamoto, H.1
  • 5
    • 53349109305 scopus 로고    scopus 로고
    • Time trend of the prevalence of hepatitis E antibodies among farmers and blood Donors: A Potential Zoonosis in Denmark
    • Christensen PB, Engle RE, Hjort C, Homburg KM, Vach W, et al. (2008) Time trend of the prevalence of hepatitis E antibodies among farmers and blood Donors: A Potential Zoonosis in Denmark. Clin Infec.Dis 47: 1026-1031.
    • (2008) Clin Infec.Dis , vol.47 , pp. 1026-1031
    • Christensen, P.B.1    Engle, R.E.2    Hjort, C.3    Homburg, K.M.4    Vach, W.5
  • 6
    • 54049157144 scopus 로고    scopus 로고
    • Hepatitis E: An emerging infection in developed countries
    • Dalton HR, Bendall R, Ijaz S, Banks M (2008) Hepatitis E: An emerging infection in developed countries. Lancet Infect Dis 8: 698-709.
    • (2008) Lancet Infect Dis , vol.8 , pp. 698-709
    • Dalton, H.R.1    Bendall, R.2    Ijaz, S.3    Banks, M.4
  • 7
    • 67650663505 scopus 로고    scopus 로고
    • Epidemiology of hepatitis E virus in the United States: Results from the Third National Health and Nutrition Examination Survey, 1988-1994
    • Kuniholm MH, Purcell RH, McQuillan GM, Engle RE, Wasley A, et al. (2009) Epidemiology of hepatitis E virus in the United States: Results from the Third National Health and Nutrition Examination Survey, 1988-1994. J Infect Dis 200: 48-56.
    • (2009) J Infect Dis , vol.200 , pp. 48-56
    • Kuniholm, M.H.1    Purcell, R.H.2    McQuillan, G.M.3    Engle, R.E.4    Wasley, A.5
  • 8
    • 0036135725 scopus 로고    scopus 로고
    • Prevalence of Antibodies to Hepatitis E Virus in Veterinarians Working with Swine and in Normal Blood Donors in the United States and Other Countries
    • Meng XJ, Wiseman B, Elvinger F, Guenette DK, Toth TE, et al. (2002) Prevalence of Antibodies to Hepatitis E Virus in Veterinarians Working with Swine and in Normal Blood Donors in the United States and Other Countries. J Clin Microbiol 40: 117-122.
    • (2002) J Clin Microbiol , vol.40 , pp. 117-122
    • Meng, X.J.1    Wiseman, B.2    Elvinger, F.3    Guenette, D.K.4    Toth, T.E.5
  • 9
    • 62949123321 scopus 로고    scopus 로고
    • Characterization and zoonotic potential of endemic hepatitis E virus (HEV) strains in humans and animals in Hungary
    • Reuter G, Fodor D, Forgách P, Kátai A, Szucs G (2009) Characterization and zoonotic potential of endemic hepatitis E virus (HEV) strains in humans and animals in Hungary. J Clin Virol 144, 277-281.
    • (2009) J Clin Virol , vol.144 , pp. 277-281
    • Reuter, G.1    Fodor, D.2    Forgách, P.3    Kátai, A.4    Szucs, G.5
  • 11
    • 33847633997 scopus 로고    scopus 로고
    • Detection and characterization of infectious Hepatitis E virus from commercial pig livers sold in local grocery stores in the USA
    • Feagins AR, Opriessnig T, Guenette DK, Halbur PG, Meng XJ (2007) Detection and characterization of infectious Hepatitis E virus from commercial pig livers sold in local grocery stores in the USA. J Gen Virol 88: 912-917.
    • (2007) J Gen Virol , vol.88 , pp. 912-917
    • Feagins, A.R.1    Opriessnig, T.2    Guenette, D.K.3    Halbur, P.G.4    Meng, X.J.5
  • 12
    • 46049105508 scopus 로고    scopus 로고
    • The detection and characterization of hepatitis E virus in pig livers from retail markets of India
    • Kulkarni MA, Arankalle VA (2008) The detection and characterization of hepatitis E virus in pig livers from retail markets of India. J Med Virol 80: 1387-1390.
    • (2008) J Med Virol , vol.80 , pp. 1387-1390
    • Kulkarni, M.A.1    Arankalle, V.A.2
  • 13
    • 16844372785 scopus 로고    scopus 로고
    • Identification of Genotype 3 Hepatitis E virus (HEV) in serum and fecal samples from pigs in Thailand and Mexico, where genotype 1 and 2 HEV strains are prevalent in the respective human populations
    • Cooper K, Huang FF, Batista L, Rayo CD, Bezanilla JC, et al. (2005) Identification of Genotype 3 Hepatitis E virus (HEV) in serum and fecal samples from pigs in Thailand and Mexico, where genotype 1 and 2 HEV strains are prevalent in the respective human populations. J Clin Micro 43: 1684-1688.
    • (2005) J Clin Micro , vol.43 , pp. 1684-1688
    • Cooper, K.1    Huang, F.F.2    Batista, L.3    Rayo, C.D.4    Bezanilla, J.C.5
  • 14
    • 62949247405 scopus 로고    scopus 로고
    • Indigenous hepatitis E virus infection in England: More common than it seems
    • Ijaz S, Vyse AJ, Morgan D, Pebody RG, Tedder SR, et al. (2009) Indigenous hepatitis E virus infection in England: More common than it seems. J Clin Virol 44: 272-276.
    • (2009) J Clin Virol , vol.44 , pp. 272-276
    • Ijaz, S.1    Vyse, A.J.2    Morgan, D.3    Pebody, R.G.4    Tedder, S.R.5
  • 15
    • 33748336456 scopus 로고    scopus 로고
    • Hepatitis E indigenous to economically developed countries: To what extent a zoonosis?
    • Teo CG (2006) Hepatitis E indigenous to economically developed countries: To what extent a zoonosis? Curr Opin Infect Dis 19: 460-466.
    • (2006) Curr Opin Infect Dis , vol.19 , pp. 460-466
    • Teo, C.G.1
  • 16
    • 47349102142 scopus 로고    scopus 로고
    • Hepatitis E virus infection among domestic animals in eastern China
    • Zhang W, Shen Q, Mou J, Gong G, Yang Z, et al. (2008) Hepatitis E virus infection among domestic animals in eastern China. Zoonoses Public Health 55: 291-298.
    • (2008) Zoonoses Public Health , vol.55 , pp. 291-298
    • Zhang, W.1    Shen, Q.2    Mou, J.3    Gong, G.4    Yang, Z.5
  • 17
    • 68049094037 scopus 로고    scopus 로고
    • A novel genotype of hepatitis E virus prevalent among rabbits in China
    • Zhao C, Ma Z, Harrison TJ, Fang R, Zhang C, et al. (2009) A novel genotype of hepatitis E virus prevalent among rabbits in China. J Med Virol 81: 1371-1379.
    • (2009) J Med Virol , vol.81 , pp. 1371-1379
    • Zhao, C.1    Ma, Z.2    Harrison, T.J.3    Fang, R.4    Zhang, C.5
  • 18
    • 8644265905 scopus 로고    scopus 로고
    • Prevalence of Hepatitis E Virus (HEV) Infection in Wild Boars and Deer and Genetic Identification of a Genotype 3 HEV from a Boar in Japan
    • Sonoda H, Abe M, Sugimoto T, Sato Y, Bando M, et al. (2004) Prevalence of Hepatitis E Virus (HEV) Infection in Wild Boars and Deer and Genetic Identification of a Genotype 3 HEV from a Boar in Japan. J Clin Microbiol 42: 5371-5374.
    • (2004) J Clin Microbiol , vol.42 , pp. 5371-5374
    • Sonoda, H.1    Abe, M.2    Sugimoto, T.3    Sato, Y.4    Bando, M.5
  • 19
  • 21
    • 13244255415 scopus 로고    scopus 로고
    • MUSCLE: A multiple sequence alignment method with reduced time and space complexity
    • Edgar RC (2004) MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics 5: 113.
    • (2004) BMC Bioinformatics , vol.5 , pp. 113
    • Edgar, R.C.1
  • 22
    • 33845727469 scopus 로고    scopus 로고
    • Multiple sequence alignment for phylogenetic purposes
    • Morrison DA (2006) Multiple sequence alignment for phylogenetic purposes. Aust Sys Botany 19: 479-539.
    • (2006) Aust Sys Botany , vol.19 , pp. 479-539
    • Morrison, D.A.1
  • 24
    • 17744396121 scopus 로고    scopus 로고
    • Not so different after all: A comparison of methods for detecting amino acid sites under selection
    • Kosakovsky Pond SL, Frost SDW (2005) Not so different after all: a comparison of methods for detecting amino acid sites under selection. Mol Biol Evol 22: 1208-1222.
    • (2005) Mol Biol Evol , vol.22 , pp. 1208-1222
    • Kosakovsky Pond, S.L.1    Frost, S.D.W.2
  • 25
    • 38649110663 scopus 로고    scopus 로고
    • BEAST: Bayesian evolutionary analysis by sampling trees
    • Drummond AJ, Rambaut A (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7: 214.
    • (2007) BMC Evol Biol , vol.7 , pp. 214
    • Drummond, A.J.1    Rambaut, A.2
  • 26
    • 36248968176 scopus 로고    scopus 로고
    • Bayesian coalescent inference of hepatitis A virus populations: Evolutionary rates and patterns
    • Moratorio G, Costa-Mattioli M, Piovani R, Romero H, Musto H, et al. (2007) Bayesian coalescent inference of hepatitis A virus populations: evolutionary rates and patterns. J Gen Virol 88: 3039-3042.
    • (2007) J Gen Virol , vol.88 , pp. 3039-3042
    • Moratorio, G.1    Costa-Mattioli, M.2    Piovani, R.3    Romero, H.4    Musto, H.5
  • 27
    • 34748884375 scopus 로고    scopus 로고
    • The evolutionary genetics of viral emergence
    • Holmes EC, Drummond AJ (2007) The evolutionary genetics of viral emergence. CTMI 315: 51-66.
    • (2007) CTMI , vol.315 , pp. 51-66
    • Holmes, E.C.1    Drummond, A.J.2
  • 28
    • 2942642280 scopus 로고    scopus 로고
    • Determination and analysis of the complete genomic sequence of avian hepatitis E virus (avian HEV) and attempts to infect rhesus monkeys with avian HEV
    • Huang FF, Sun ZF, Emerson SU, Purcell RH, Shivaprasad HL, et al. (2004) Determination and analysis of the complete genomic sequence of avian hepatitis E virus (avian HEV) and attempts to infect rhesus monkeys with avian HEV. J Gen Virol 85: 1609-1618.
    • (2004) J Gen Virol , vol.85 , pp. 1609-1618
    • Huang, F.F.1    Sun, Z.F.2    Emerson, S.U.3    Purcell, R.H.4    Shivaprasad, H.L.5
  • 29
    • 0003078723 scopus 로고
    • Approximate Bayesian inference by the weighted likelihood bootstrap
    • Newton MA, Raftery AE (1994) Approximate Bayesian inference by the weighted likelihood bootstrap. J R Stat Soc B 56: 3-48.
    • (1994) J R Stat Soc B , vol.56 , pp. 3-48
    • Newton, M.A.1    Raftery, A.E.2
  • 30
    • 0034983646 scopus 로고    scopus 로고
    • Bayesian selection of continuoustime Markov chain evolutionary models
    • Suchard MA, Weiss RE, Sinsheimer JS (2001) Bayesian selection of continuoustime Markov chain evolutionary models. Mol Biol Evol 18: 1001-1013.
    • (2001) Mol Biol Evol , vol.18 , pp. 1001-1013
    • Suchard, M.A.1    Weiss, R.E.2    Sinsheimer, J.S.3
  • 32
    • 65549090472 scopus 로고    scopus 로고
    • Sequence analysis and comparison of avian hepatitis E viruses from Australia and Europe indicate the existence of different genotypes
    • Bilic C, Jaskulska B, Basic A, Morrow CJ, Hess M (2009) Sequence analysis and comparison of avian hepatitis E viruses from Australia and Europe indicate the existence of different genotypes. J Gen Virol 90: 63-873.
    • (2009) J Gen Virol , vol.90 , pp. 63-873
    • Bilic, C.1    Jaskulska, B.2    Basic, A.3    Morrow, C.J.4    Hess, M.5
  • 34
    • 0031828777 scopus 로고    scopus 로고
    • Experimental infection of pigs with the newly identified swine hepatitis E virus (swine HEV), but not with human strains of HEV
    • Meng XJ, Halbur PG, Haynes JS, Tsareva TS, Bruna JD, et al. (1998) Experimental infection of pigs with the newly identified swine hepatitis E virus (swine HEV), but not with human strains of HEV. Arch Virol 143: 1405-1415.
    • (1998) Arch Virol , vol.143 , pp. 1405-1415
    • Meng, X.J.1    Halbur, P.G.2    Haynes, J.S.3    Tsareva, T.S.4    Bruna, J.D.5
  • 35
    • 76849108451 scopus 로고    scopus 로고
    • Detection of a novel hepatitis E-like virus in faeces of wild rats using a nested broad-spectrum RT-PCR
    • Johne R, Plenge-Bönig A, Hess M, Ulrich RG, Reetz J, et al. (2010) Detection of a novel hepatitis E-like virus in faeces of wild rats using a nested broad-spectrum RT-PCR. J Gen Virol 91: 750-758.
    • (2010) J Gen Virol , vol.91 , pp. 750-758
    • Johne, R.1    Plenge-Bönig, A.2    Hess, M.3    Ulrich, R.G.4    Reetz, J.5
  • 37
    • 0037377762 scopus 로고    scopus 로고
    • Molecular clocks and the puzzle of RNA virus origins
    • Holmes EC (2003) Molecular clocks and the puzzle of RNA virus origins. J Virol 77: 3893-3897.
    • (2003) J Virol , vol.77 , pp. 3893-3897
    • Holmes, E.C.1
  • 38
    • 33344463368 scopus 로고    scopus 로고
    • The domestication of the pig (Sus scrofa): New challenges and approaches
    • In: Zeder MA, Bradley DG, Emshwiller E, Smith BD, eds, Berkley: University of Californa Press
    • Albarella, U, Dobney K, Rowley-Conway P (2006) The domestication of the pig (Sus scrofa): New challenges and approaches. In: Zeder MA, Bradley DG, Emshwiller E, Smith BD, eds. Documenting domestication: New genetic and archaeological paradigms. Berkley: University of Californa Press. pp 209-227.
    • (2006) Documenting domestication: New genetic and archaeological paradigms , pp. 209-227
    • Albarella, U.1    Dobney, K.2    Rowley-Conway, P.3
  • 39
    • 85050169318 scopus 로고
    • The origin and growth of urbanization in the world
    • Davis K (1955) The origin and growth of urbanization in the world. Am J Sociol 60: 429-437.
    • (1955) Am J Sociol , vol.60 , pp. 429-437
    • Davis, K.1
  • 42
    • 4043160014 scopus 로고    scopus 로고
    • Estimation of the mutation rate of hepatitis E virus based on a set of closely related 7.5-year-apart isolates from Sapporo, Japan
    • Takahashi K, Toyota J, Karino Y, Kang J-H, Maekubo H, et al. (2004) Estimation of the mutation rate of hepatitis E virus based on a set of closely related 7.5-year-apart isolates from Sapporo, Japan. Hepatol Res 29: 212-215.
    • (2004) Hepatol Res , vol.29 , pp. 212-215
    • Takahashi, K.1    Toyota, J.2    Karino, Y.3    Kang, J.-H.4    Maekubo, H.5


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