Molecular characterization of severe and mild cases of Influenza A (H1N1) 2009 strain from Argentina

Medicina

Volumn 70, Issue 6, 2010, Pages 518-523

  Baumeister, Elsa ^a   Palacios, Gustavo ^b   Cisterna, Daniel ^a   Solovyov, Alexander ^b,c   Hui, Jeffrey ^b   Savji, Nazir ^b   Bussetti, Ana Valeria ^b   Campos, Ana ^a   Pontoriero, Andrea ^a   Jabado, Omar J ^b   Street, Craig ^b   Hirschberg, David L ^b   Rabadan, Raul ^c   Alonio, Virginia ^a   Molina, Viviana ^a   Hutchison, Stephen ^d   Egholm, Michael ^d   Lipkin, W Ian ^b  

^a INSTITUTO NACIONAL DE ENFERMEDADES INFECCIOSAS   (Argentina)

^b Department of Medicine   (United States)

^c 454 Life Sciences ^*  (United States)

^d NONE   (United States)

Author keywords

Argentina; H1N1 pdm; Influenza

Indexed keywords

AMINO ACID; ANTIVIRUS AGENT;

ADULT; ARGENTINA; ARTICLE; CHILD; CLINICAL ARTICLE; DISEASE SEVERITY; FEMALE; GENE SEQUENCE; GENETIC DRIFT; HUMAN; INFANT; INFLUENZA A (H1N1); MALE; NONHUMAN; PANDEMIC INFLUENZA; VIRUS VIRULENCE;

ADOLESCENT; ADULT; ARGENTINA; CHILD; CHILD, PRESCHOOL; CLUSTER ANALYSIS; DNA, VIRAL; FEMALE; HUMANS; INFANT; INFLUENZA A VIRUS, H1N1 SUBTYPE; INFLUENZA, HUMAN; MALE; MIDDLE AGED; MOLECULAR SEQUENCE DATA; MUTATION; RECEPTORS, VIRUS; REPRODUCIBILITY OF RESULTS; RNA, VIRAL; SEVERITY OF ILLNESS INDEX; YOUNG ADULT;

EID: 78650636685     PISSN: 00257680     EISSN: 16699106     Source Type: Journal    
DOI: None     Document Type: Article

References (17)

1. Fraser C, Donnelly CA, Cauchemez S, et al. Pandemic potential of a strain of influenza A (H1N1): early findings. Science 2009; 324: 1557-61.
2. Vaillant L, La Ruche G, Tarantola A, Barboza P. Epidemiology of fatal cases associated with pandemic H1N1 influenza 2009. Euro Surveill 2009; 14(33), pii: 19309
3. Zamarin D, Ortigoza MB, Palese P. Influenza A virus PB1-F2 protein contributes to viral pathogenesis in mice. J Virol 2006; 80: 7976-83.
4. Palacios G, Quan PL, Jabado OJ, et al. Panmicrobial oligonucleotide array for diagnosis of infectious diseases. Emerg Infect Dis 2007; 13: 73-81.
5. Quan PL, Palacios G, Jabado OJ, et al. Detection of respiratory viruses and subtype identification of influenza A viruses by GreeneChipResp oligonucleotide microarray. J Clin Microbiol 2007; 45: 2359-64.
6. Jabado OJ, Palacios G, Kapoor V, et al. Greene SCPrimer: a rapid comprehensive tool for designing degenerate primers from multiple sequence alignments. Nucleic Acids Res 2006; 34: 6605-11.
7. Hoffmann E, Stech J, Guan Y, Webster RG, Perez DR. Universal primer set for the full-length amplification of all influenza A viruses. Arch Virol 2001; 146: 2275-89.
8. Felsenstein J. PHYLIP (Phylogeny Inference Package) version 3.69. Distributed by author; 2009.
9. Stevens J, Blixt O, Glaser L, et al. Glycan microarray analysis of the hemagglutinins from modern and pandemic influenza viruses reveals different receptor specificities. J Mol Biol 2006; 355: 1143-55.
10. Stevens J, Corper AL, Basler CF, Taubenberger JK, Palese P, Wilson IA. Structure of the uncleaved human H1 hemagglutinin from the extinct 1918 influenza virus. Science 2004; 303: 1866-70.
11. Tumpey TM, Maines TR, Van Hoeven N, et al. A two-amino acid change in the hemagglutinin of the 1918 influenza virus abolishes transmission. Science 2007; 315: 655-9.
12. Childs RA, Palma AS, Wharton S, et al. Receptor-binding specificity of pandemic influenza A (H1N1) 2009 virus determined by carbohydrate microarray. Nat Biotechnol 2009; 27: 797-9.
13. Gamblin SJ, Haire LF, Russell RJ, et al. The structure and receptor binding properties of the 1918 influenza hemagglutinin. Science 2004; 303: 1838-42.
14. Deem MW, Pan K. The epitope regions of H1-subtype influenza A, with application to vaccine efficacy. Protein Eng Des Sel 2009; 22: 543-6.
15. Shen J, Ma J, Wang Q. Evolutionary trends of A(H1N1) influenza virus hemagglutinin since 1918. PLoS One 2009; 4(11): e7789.
16. ProMED-mail. Mutation of pandemic influenza A (H1N1) 2009 virus in Norway. ProMED-mail 2009, Fri 20 Nov 2009.
17. Huson DH, Richter DC, Rausch C, Dezulian T, Franz M, Rupp R. Dendroscope: An interactive viewer for large phylogenetic trees. BMC Bioinformatics 2007; 8: 460.