-
1
-
-
33751361164
-
Genetic variability of hepatitis A virus strain HAF-203 isolated in Brazil and expression of the VP1 gene in Escherichia coli
-
Baptista M.L., Silva M., de Lima M.A., Yoshida C.F.T., Gaspar A.M., Galler R. Genetic variability of hepatitis A virus strain HAF-203 isolated in Brazil and expression of the VP1 gene in Escherichia coli. Mem. Inst. Oswaldo Cruz 2006, 101:759-766.
-
(2006)
Mem. Inst. Oswaldo Cruz
, vol.101
, pp. 759-766
-
-
Baptista, M.L.1
Silva, M.2
de Lima, M.A.3
Yoshida, C.F.T.4
Gaspar, A.M.5
Galler, R.6
-
2
-
-
0028157960
-
In vitro characterization of an internal ribosomal entry site (IRES) present within the 5' nontranslated region of hepatitis A virus RNA: comparison with the IRES of encephalomyocarditis virus
-
Brown E.A., Zajac A.J., Lemon S.M. In vitro characterization of an internal ribosomal entry site (IRES) present within the 5' nontranslated region of hepatitis A virus RNA: comparison with the IRES of encephalomyocarditis virus. J. Virol. 1994, 68:1066-1074.
-
(1994)
J. Virol.
, vol.68
, pp. 1066-1074
-
-
Brown, E.A.1
Zajac, A.J.2
Lemon, S.M.3
-
3
-
-
0028903901
-
Complete nucleotide sequence of a cytopathic hepatitis A virus strain isolated in Italy
-
Beneduce F., Pisani G., Divizia M., Panh A., Morace G. Complete nucleotide sequence of a cytopathic hepatitis A virus strain isolated in Italy. Virus Res. 1995, 36:299-309.
-
(1995)
Virus Res.
, vol.36
, pp. 299-309
-
-
Beneduce, F.1
Pisani, G.2
Divizia, M.3
Panh, A.4
Morace, G.5
-
4
-
-
77949505988
-
PALM: a paralleled and integrated framework for phylogenetic inference with automatic likelihood model selectors
-
Chen S.-H., Su S.-Y., Lo C.-Z., Chen K.-H., Huang T.-J., Kuo B.-H., Lin C.-Y. PALM: a paralleled and integrated framework for phylogenetic inference with automatic likelihood model selectors. PLoS ONE 2009, 4(12):e8116.
-
(2009)
PLoS ONE
, vol.4
, Issue.12
-
-
Chen, S.-H.1
Su, S.-Y.2
Lo, C.-Z.3
Chen, K.-H.4
Huang, T.-J.5
Kuo, B.-H.6
Lin, C.-Y.7
-
5
-
-
33745152691
-
Development, evaluation, and standardization of a real-time TaqMan reverse transcription-PCR assay for quantification of hepatitis A virus in clinical and shellfish samples
-
Costafreda I.M., Bosch A., Pinto R. Development, evaluation, and standardization of a real-time TaqMan reverse transcription-PCR assay for quantification of hepatitis A virus in clinical and shellfish samples. Appl. Environ. Microbiol. 2006, 72:3846-3855.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 3846-3855
-
-
Costafreda, I.M.1
Bosch, A.2
Pinto, R.3
-
6
-
-
0036721197
-
Molecular evolution of hepatitis A virus: a new classification based on the complete VP1 protein
-
Costa-Mattioli M., Cristina J., Romero H., Perez-Bercof R., Casane D., Colina R., Garcia L., Vega I., Glikman G., Romanowsky V., Castello A., Nicand E., Gassin M., Billaudel S., Ferre V. Molecular evolution of hepatitis A virus: a new classification based on the complete VP1 protein. J. Virol. 2002, 76:9516-9525.
-
(2002)
J. Virol.
, vol.76
, pp. 9516-9525
-
-
Costa-Mattioli, M.1
Cristina, J.2
Romero, H.3
Perez-Bercof, R.4
Casane, D.5
Colina, R.6
Garcia, L.7
Vega, I.8
Glikman, G.9
Romanowsky, V.10
Castello, A.11
Nicand, E.12
Gassin, M.13
Billaudel, S.14
Ferre, V.15
-
7
-
-
30344475523
-
Analysis of sequential hepatitis A virus strains reveals coexistence of distinct viral subpopulations
-
Costa-Mattioli M., Domingo E., Cristina J. Analysis of sequential hepatitis A virus strains reveals coexistence of distinct viral subpopulations. J. Gen. Virol. 2006, 87:115-118.
-
(2006)
J. Gen. Virol.
, vol.87
, pp. 115-118
-
-
Costa-Mattioli, M.1
Domingo, E.2
Cristina, J.3
-
8
-
-
0038046554
-
Evidence of recombination in natural populations of hepatitis A virus
-
Costa-Mattioli M., Ferre V., Casane D., Perez-Bercoff R., Coste-Burel M., Imbert-Marcille B.M., Andre E.C., Bressollette-Bodin C., Billaudel S., Cristina J. Evidence of recombination in natural populations of hepatitis A virus. Virology 2003, 311:51-59.
-
(2003)
Virology
, vol.311
, pp. 51-59
-
-
Costa-Mattioli, M.1
Ferre, V.2
Casane, D.3
Perez-Bercoff, R.4
Coste-Burel, M.5
Imbert-Marcille, B.M.6
Andre, E.C.7
Bressollette-Bodin, C.8
Billaudel, S.9
Cristina, J.10
-
9
-
-
0034772410
-
Genetic variability of hepatitis A virus in South America reveals heterogeneity and co-circulation during epidemic outbreaks
-
Costa-Mattioli M., Ferre V., Monpoeho S., Garcia L., Colina R., Billaudel S., Vega I., Perez-Bercoff R., Cristina J. Genetic variability of hepatitis A virus in South America reveals heterogeneity and co-circulation during epidemic outbreaks. J. Gen. Virol. 2001, 82:2647-2652.
-
(2001)
J. Gen. Virol.
, vol.82
, pp. 2647-2652
-
-
Costa-Mattioli, M.1
Ferre, V.2
Monpoeho, S.3
Garcia, L.4
Colina, R.5
Billaudel, S.6
Vega, I.7
Perez-Bercoff, R.8
Cristina, J.9
-
10
-
-
34447321838
-
Genetic variability and molecular evolution of Hepatitis A virus
-
Cristina J., Costa-Mattioli M. Genetic variability and molecular evolution of Hepatitis A virus. Virus Res. 2007, 127:151-157.
-
(2007)
Virus Res.
, vol.127
, pp. 151-157
-
-
Cristina, J.1
Costa-Mattioli, M.2
-
11
-
-
0036186080
-
Characterization of hepatitis A virus isolates from sub-genotypes IA and IB in Rio de Janeiro, Brazil
-
De Paula V.S., Baptista M.L., Lampe L., Niel C., Gaspar A.M. Characterization of hepatitis A virus isolates from sub-genotypes IA and IB in Rio de Janeiro, Brazil. J. Med. Virol. 2002, 66:22-27.
-
(2002)
J. Med. Virol.
, vol.66
, pp. 22-27
-
-
De Paula, V.S.1
Baptista, M.L.2
Lampe, L.3
Niel, C.4
Gaspar, A.M.5
-
12
-
-
0037291510
-
Mixed infection of a child care provider with hepatitis A virus isolates from subgenotypes IA and IB revealed by heteroduplex mobility assay
-
De Paula V.S., Saback F.L., Gaspar A.M., Niel C. Mixed infection of a child care provider with hepatitis A virus isolates from subgenotypes IA and IB revealed by heteroduplex mobility assay. J. Virol. Methods 2003, 107:223-228.
-
(2003)
J. Virol. Methods
, vol.107
, pp. 223-228
-
-
De Paula, V.S.1
Saback, F.L.2
Gaspar, A.M.3
Niel, C.4
-
13
-
-
77956818677
-
Epidemiology and genetic characterisation of Hepatitis A virus genotype IIA
-
Desbois D., Couturier E., Mackiewicz V., Graube A., Letort M.-J., Dussaix E., Roque-Afonso A.-M. Epidemiology and genetic characterisation of Hepatitis A virus genotype IIA. J. Clin. Microbiol. 2010, 10.1128/JCM.00667-10.
-
(2010)
J. Clin. Microbiol.
-
-
Desbois, D.1
Couturier, E.2
Mackiewicz, V.3
Graube, A.4
Letort, M.-J.5
Dussaix, E.6
Roque-Afonso, A.-M.7
-
14
-
-
47549085529
-
Analysis of the full-length genome of hepatitis A virus isolated in South America: heterogeneity and evolutionary constraints
-
García-Aguirre L., Cristina J. Analysis of the full-length genome of hepatitis A virus isolated in South America: heterogeneity and evolutionary constraints. Arch. Virol. 2008, 153:1473-1478.
-
(2008)
Arch. Virol.
, vol.153
, pp. 1473-1478
-
-
García-Aguirre, L.1
Cristina, J.2
-
15
-
-
0026958660
-
Primary isolation of a Brazilian strain of hepatitis A virus (HAF-203) and growth in a primate cell line (FRhK-4)
-
Gaspar A.M.C., Vitral C.L., Yoshida C.F.T., Schatzmayr H.G. Primary isolation of a Brazilian strain of hepatitis A virus (HAF-203) and growth in a primate cell line (FRhK-4). Braz. J. Med. Biol. Res. 1992, 25:697-705.
-
(1992)
Braz. J. Med. Biol. Res.
, vol.25
, pp. 697-705
-
-
Gaspar, A.M.C.1
Vitral, C.L.2
Yoshida, C.F.T.3
Schatzmayr, H.G.4
-
16
-
-
0033753825
-
Sister-Scanning: a Monte Carlo procedure for assessing signals in recombinant sequences
-
Gibbs M.J., Armstrong J.S., Gibbs A.J. Sister-Scanning: a Monte Carlo procedure for assessing signals in recombinant sequences. Bioinformatics 2000, 16:573-582.
-
(2000)
Bioinformatics
, vol.16
, pp. 573-582
-
-
Gibbs, M.J.1
Armstrong, J.S.2
Gibbs, A.J.3
-
17
-
-
0027230837
-
Identification of the hepatitis A virus internal ribosome entry site: in vivo and in vitro analysis of bicistronic RNAs containing the HAV 5 noncoding region
-
Glass M.J., Jia X.Y., Summers D.F. Identification of the hepatitis A virus internal ribosome entry site: in vivo and in vitro analysis of bicistronic RNAs containing the HAV 5 noncoding region. Virology 1993, 193:842-852.
-
(1993)
Virology
, vol.193
, pp. 842-852
-
-
Glass, M.J.1
Jia, X.Y.2
Summers, D.F.3
-
18
-
-
0028127766
-
Nucleotide sequence of wild-type hepatitis A virus GBM in comparison with two cell culture-adapted variants
-
Graff J., Normann A., Feinstone S.M., Flehmig B. Nucleotide sequence of wild-type hepatitis A virus GBM in comparison with two cell culture-adapted variants. J. Virol. 1994, 68:548-554.
-
(1994)
J. Virol.
, vol.68
, pp. 548-554
-
-
Graff, J.1
Normann, A.2
Feinstone, S.M.3
Flehmig, B.4
-
19
-
-
0002051540
-
BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
-
Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp. Ser. 1999, 41:95-98.
-
(1999)
Nucleic Acids Symp. Ser.
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
-
20
-
-
33751253784
-
Recombination patterns in aphthoviruses mirror those found in other picornaviruses
-
Heath L., van der Walt E., Varsani A., Martin D.P. Recombination patterns in aphthoviruses mirror those found in other picornaviruses. J. Virol. 2006, 80:11827-11832.
-
(2006)
J. Virol.
, vol.80
, pp. 11827-11832
-
-
Heath, L.1
van der Walt, E.2
Varsani, A.3
Martin, D.P.4
-
21
-
-
34548276804
-
Hepatitis A virus
-
Lippincott/Williams & Wilkins, Philadelphia, D.M. Knipe, P.M. Howley (Eds.)
-
Hollinger F.B., Emerson S.U. Hepatitis A virus. Field's Virology 2007, 911-947. Lippincott/Williams & Wilkins, Philadelphia. 5th ed. D.M. Knipe, P.M. Howley (Eds.).
-
(2007)
Field's Virology
, pp. 911-947
-
-
Hollinger, F.B.1
Emerson, S.U.2
-
22
-
-
0025230335
-
Molecular epidemiology of human hepatitis A virus defined by an antigen-capture polymerase chain reaction method
-
Jansen R.W., Siegl G., Lemon S.M. Molecular epidemiology of human hepatitis A virus defined by an antigen-capture polymerase chain reaction method. Proc. Natl. Acad. Sci. U. S. A. 1990, 87:2867-2871.
-
(1990)
Proc. Natl. Acad. Sci. U. S. A.
, vol.87
, pp. 2867-2871
-
-
Jansen, R.W.1
Siegl, G.2
Lemon, S.M.3
-
23
-
-
45949109669
-
MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences
-
Kumar S., Nei M., Dudley J., Tamur K. MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief. Bioinformatics 2008, 9:299-306.
-
(2008)
Brief. Bioinformatics
, vol.9
, pp. 299-306
-
-
Kumar, S.1
Nei, M.2
Dudley, J.3
Tamur, K.4
-
24
-
-
77951245406
-
Identification of recombination between subgenotypes IA and IB of hepatitis A virus
-
Liu W., Zhai J., Liu J., Xie J. Identification of recombination between subgenotypes IA and IB of hepatitis A virus. Virus Genes 2010, 40:222-224.
-
(2010)
Virus Genes
, vol.40
, pp. 222-224
-
-
Liu, W.1
Zhai, J.2
Liu, J.3
Xie, J.4
-
25
-
-
0032889281
-
Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination
-
Lole K.S., Bollinger R.C., Paranjape R.S., Gadkari D., Kulkarni S.S., Novak N.G., Ingersoll R., Sheppard H.W., Ray S.C. Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination. J. Virol. 1999, 73:152-160.
-
(1999)
J. Virol.
, vol.73
, pp. 152-160
-
-
Lole, K.S.1
Bollinger, R.C.2
Paranjape, R.S.3
Gadkari, D.4
Kulkarni, S.S.5
Novak, N.G.6
Ingersoll, R.7
Sheppard, H.W.8
Ray, S.C.9
-
26
-
-
13144283628
-
A modified BOOTSCAN algorithm for automated identification of recombinant sequences and recombination breakpoints
-
Martin D.P., Posada D., Crandall K.A., Williamson C. A modified BOOTSCAN algorithm for automated identification of recombinant sequences and recombination breakpoints. AIDS Res. Hum. Retroviruses 2005, 21:98-102.
-
(2005)
AIDS Res. Hum. Retroviruses
, vol.21
, pp. 98-102
-
-
Martin, D.P.1
Posada, D.2
Crandall, K.A.3
Williamson, C.4
-
27
-
-
0033824415
-
RDP: detection of recombination amongst aligned sequences
-
Martin D., Rybicki E. RDP: detection of recombination amongst aligned sequences. Bioinformatics 2000, 16:562-563.
-
(2000)
Bioinformatics
, vol.16
, pp. 562-563
-
-
Martin, D.1
Rybicki, E.2
-
28
-
-
0036779233
-
Genetic characterization of hepatitis A virus isolates from Buenos Aires, Argentina
-
Mbayed V.A., Sookoian S., Alfonso V., Campos R.H. Genetic characterization of hepatitis A virus isolates from Buenos Aires, Argentina. J. Med. Virol. 2002, 68:168-174.
-
(2002)
J. Med. Virol.
, vol.68
, pp. 168-174
-
-
Mbayed, V.A.1
Sookoian, S.2
Alfonso, V.3
Campos, R.H.4
-
29
-
-
37449033067
-
Molecular characterization of hepatitis A virus in children with fulminant hepatic failure in Argentina
-
Munne M.S., Vladimirsky S., Moreiro R., Ciocca M., Cuarterolo M., Otegui L., Soto S., Brajterman L., Castro R., Sasbon J., Gianivelli S., Buamscha D., Quarleri Gonzalez J.E. Molecular characterization of hepatitis A virus in children with fulminant hepatic failure in Argentina. Liver Int. 2007, 28:47-53.
-
(2007)
Liver Int.
, vol.28
, pp. 47-53
-
-
Munne, M.S.1
Vladimirsky, S.2
Moreiro, R.3
Ciocca, M.4
Cuarterolo, M.5
Otegui, L.6
Soto, S.7
Brajterman, L.8
Castro, R.9
Sasbon, J.10
Gianivelli, S.11
Buamscha, D.12
Quarleri Gonzalez, J.E.13
-
30
-
-
0033590220
-
Possible emergence of new geminiviruses by frequent recombination
-
Padidam M., Sawyer S., Fauquet C.M. Possible emergence of new geminiviruses by frequent recombination. Virology 1999, 265:218-225.
-
(1999)
Virology
, vol.265
, pp. 218-225
-
-
Padidam, M.1
Sawyer, S.2
Fauquet, C.M.3
-
31
-
-
0023226427
-
The entire nucleotide sequence of the genome of human hepatitis A virus (isolate MBB)
-
Paul A.V., Tada H., von der Helm K., Wissel T., Kiehn R., Wimmer E., Deinhardt F. The entire nucleotide sequence of the genome of human hepatitis A virus (isolate MBB). Virus Res. 1987, 8:153-171.
-
(1987)
Virus Res.
, vol.8
, pp. 153-171
-
-
Paul, A.V.1
Tada, H.2
von der Helm, K.3
Wissel, T.4
Kiehn, R.5
Wimmer, E.6
Deinhardt, F.7
-
32
-
-
0035923699
-
Evaluation of methods for detecting recombination from DNA sequences: computer simulations
-
Posada D., Crandall K.A. Evaluation of methods for detecting recombination from DNA sequences: computer simulations. Proc. Natl. Acad. Sci. U. S. A. 2001, 98:13757-13762.
-
(2001)
Proc. Natl. Acad. Sci. U. S. A.
, vol.98
, pp. 13757-13762
-
-
Posada, D.1
Crandall, K.A.2
-
33
-
-
0026631017
-
Genetic relatedness of hepatitis A virus strains recovered from different geographical regions
-
Robertson B.H., Jansen R.W., Khanna B., Totsuka A., Nainan O.V., Siegl G., Widell A., Margolis H.S., Isomura S.A., Ito K.I., et al. Genetic relatedness of hepatitis A virus strains recovered from different geographical regions. J. Gen. Virol. 1992, 73:1365-1377.
-
(1992)
J. Gen. Virol.
, vol.73
, pp. 1365-1377
-
-
Robertson, B.H.1
Jansen, R.W.2
Khanna, B.3
Totsuka, A.4
Nainan, O.V.5
Siegl, G.6
Widell, A.7
Margolis, H.S.8
Isomura, S.A.9
Ito, K.I.10
-
34
-
-
0026086845
-
Epidemiologic patterns of wild-type hepatitis A virus determined by genetic variation
-
Robertson B.H., Khanna B., Nainan O.V., Margolis H.S. Epidemiologic patterns of wild-type hepatitis A virus determined by genetic variation. J. Infect. Dis. 1991, 163:286-292.
-
(1991)
J. Infect. Dis.
, vol.163
, pp. 286-292
-
-
Robertson, B.H.1
Khanna, B.2
Nainan, O.V.3
Margolis, H.S.4
-
35
-
-
0242300045
-
Evidence for quasispecies distributions in the human hepatitis A virus genome
-
Sanchez G., Bosch A., Gomez-Mariano G., Domingo E., Pinto R.M. Evidence for quasispecies distributions in the human hepatitis A virus genome. Virology 2003, 315:34-42.
-
(2003)
Virology
, vol.315
, pp. 34-42
-
-
Sanchez, G.1
Bosch, A.2
Gomez-Mariano, G.3
Domingo, E.4
Pinto, R.M.5
-
36
-
-
0037213938
-
Genome variability and capsid structural constraints of hepatitis A virus
-
Sanchez G., Bosch A., Pinto R.M. Genome variability and capsid structural constraints of hepatitis A virus. J. Virol. 2003, 77:452-459.
-
(2003)
J. Virol.
, vol.77
, pp. 452-459
-
-
Sanchez, G.1
Bosch, A.2
Pinto, R.M.3
-
37
-
-
0026708873
-
Analyzing the mosaic structure of genes
-
Smith J.M. Analyzing the mosaic structure of genes. J. Mol. Evol. 1992, 34:126-129.
-
(1992)
J. Mol. Evol.
, vol.34
, pp. 126-129
-
-
Smith, J.M.1
-
38
-
-
0023094778
-
Neutralization escape mutants define a dominant immunogenic neutralization site on hepatitis A virus
-
Stapleton J.T., Lemon S.M. Neutralization escape mutants define a dominant immunogenic neutralization site on hepatitis A virus. J. Virol. 1987, 61:491-498.
-
(1987)
J. Virol.
, vol.61
, pp. 491-498
-
-
Stapleton, J.T.1
Lemon, S.M.2
-
39
-
-
0030725538
-
Induction of intracellular membrane rearrangements by HAV proteins 2C and 2BC
-
Teterina N.L., Bienz K., Egger D., Gorbalenya A.E., Ehrenfeld E. Induction of intracellular membrane rearrangements by HAV proteins 2C and 2BC. Virology 1997, 237:66-77.
-
(1997)
Virology
, vol.237
, pp. 66-77
-
-
Teterina, N.L.1
Bienz, K.2
Egger, D.3
Gorbalenya, A.E.4
Ehrenfeld, E.5
-
40
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson J.D., Higgins D.G., Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 1994, 22:4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
41
-
-
0022478935
-
Detection of a genome-linked protein (VPg) of hepatitis A virus and its comparison with other picornaviral VPgs
-
Weitz M., Baroudy M., Maloy W.L., Ticehurst J.R., Purcell R.H. Detection of a genome-linked protein (VPg) of hepatitis A virus and its comparison with other picornaviral VPgs. J. Virol. 1986, 60:124-130.
-
(1986)
J. Virol.
, vol.60
, pp. 124-130
-
-
Weitz, M.1
Baroudy, M.2
Maloy, W.L.3
Ticehurst, J.R.4
Purcell, R.H.5
-
42
-
-
34249855382
-
Disruption of innate immunity due to mitochondrial targeting of a picornaviral protease precursor
-
Yang Y., Liang Y., Qu L., Chen Z., Yi M.-K., Li K., Lemon S.M. Disruption of innate immunity due to mitochondrial targeting of a picornaviral protease precursor. Proc. Natl. Acad. Sci. U. S. A. 2007, 104:7253-7258.
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, pp. 7253-7258
-
-
Yang, Y.1
Liang, Y.2
Qu, L.3
Chen, Z.4
Yi, M.-K.5
Li, K.6
Lemon, S.M.7
|