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Volumn 162, Issue 1, 2011, Pages 70-84

Prasinoderma singularis sp. nov. (Prasinophyceae, Chlorophyta), a solitary coccoid prasinophyte from the South-East Pacific Ocean

Author keywords

Binary fission; Field emission scanning electron microscopy (FE SEM); Picoplankton; Prasinoderma; Prasinophyceae; Taxonomy.

Indexed keywords

PIGMENT; RNA 18S;

EID: 78650415391     PISSN: 14344610     EISSN: 16180941     Source Type: Journal    
DOI: 10.1016/j.protis.2010.04.005     Document Type: Article
Times cited : (20)

References (46)
  • 2
    • 78650418425 scopus 로고    scopus 로고
    • PaupUP v. 1.0.3.1 a free graphical frontend for PAUP*DOS Software.
    • Calendini F, Martin, JF (2005) PaupUP v. 1.0.3.1 a free graphical frontend for PAUP*DOS Software.
    • (2005)
    • Calendini, F.1    Martin, J.F.2
  • 5
    • 43449091595 scopus 로고    scopus 로고
    • Introduction to the special section bio-optical and biogeochemical conditions in the South East Pacific in late 2004: the BIOSOPE program
    • Claustre H., Sciandra A., Vaulot D. Introduction to the special section bio-optical and biogeochemical conditions in the South East Pacific in late 2004: the BIOSOPE program. Biogeosciences 2008, 5:679-691.
    • (2008) Biogeosciences , vol.5 , pp. 679-691
    • Claustre, H.1    Sciandra, A.2    Vaulot, D.3
  • 8
    • 0000479431 scopus 로고
    • Isolation of plant DNA from fresh tissue
    • Doyle J.J., Doyle J.L. Isolation of plant DNA from fresh tissue. Focus 1990, 12:13-15.
    • (1990) Focus , vol.12 , pp. 13-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 9
    • 0028887664 scopus 로고
    • Ten minor carotenoids from Prasinophyceae (Chlorophyta)
    • Egeland E.S., Liaaen-Jensen S. Ten minor carotenoids from Prasinophyceae (Chlorophyta). Phytochemistry 1995, 40:515-520.
    • (1995) Phytochemistry , vol.40 , pp. 515-520
    • Egeland, E.S.1    Liaaen-Jensen, S.2
  • 11
    • 0021970492 scopus 로고
    • The small subunit ribosomal RNA gene sequences from the hypotrichous ciliates Oxytricha nova and Stylonychia pustulata
    • Elwood H.J., Olsen G.J., Sogin M.L. The small subunit ribosomal RNA gene sequences from the hypotrichous ciliates Oxytricha nova and Stylonychia pustulata. Mol Biol Evol 1985, 2:399-410.
    • (1985) Mol Biol Evol , vol.2 , pp. 399-410
    • Elwood, H.J.1    Olsen, G.J.2    Sogin, M.L.3
  • 12
    • 84914648507 scopus 로고
    • Photosynthetic pigments of Pseudoscourfieldia marina and select green flagellates and coccoid ultraphytoplankton: implications for the systematics of the Micromonadophyceae (Chlorophyta)
    • Fawley M.W. Photosynthetic pigments of Pseudoscourfieldia marina and select green flagellates and coccoid ultraphytoplankton: implications for the systematics of the Micromonadophyceae (Chlorophyta). J Phycol 1992, 28:26-31.
    • (1992) J Phycol , vol.28 , pp. 26-31
    • Fawley, M.W.1
  • 13
    • 0032867091 scopus 로고    scopus 로고
    • The relationship between Pseudoscourfieldia marina and Pycnococcus provasolii (Prasinophyceae, Chlorophyta): evidence from 18S rDNA sequence data
    • Fawley M.W., Qin M., Yun Y. The relationship between Pseudoscourfieldia marina and Pycnococcus provasolii (Prasinophyceae, Chlorophyta): evidence from 18S rDNA sequence data. J Phycol 1999, 35:838-843.
    • (1999) J Phycol , vol.35 , pp. 838-843
    • Fawley, M.W.1    Qin, M.2    Yun, Y.3
  • 14
    • 0033857703 scopus 로고    scopus 로고
    • Phylogenetic analyses of 18S rDNA sequences reveal a new coccoid lineage of the Prasinophyceae (Chlorophyta)
    • Fawley M.W., Yun Y., Qin M. Phylogenetic analyses of 18S rDNA sequences reveal a new coccoid lineage of the Prasinophyceae (Chlorophyta). J Phycol 2000, 36:387-393.
    • (2000) J Phycol , vol.36 , pp. 387-393
    • Fawley, M.W.1    Yun, Y.2    Qin, M.3
  • 16
    • 84989629180 scopus 로고
    • Pycnococcus provasolii gen. et sp. nov., a coccoid prasinoxanthin-containing phytoplankter from the western North Atlantic and Gulf of Mexico
    • Guillard R.R.L., Keller M.D., O'Kelly C.J., Floyd G.L. Pycnococcus provasolii gen. et sp. nov., a coccoid prasinoxanthin-containing phytoplankter from the western North Atlantic and Gulf of Mexico. J Phycol 1991, 27:39-47.
    • (1991) J Phycol , vol.27 , pp. 39-47
    • Guillard, R.R.L.1    Keller, M.D.2    O'Kelly, C.J.3    Floyd, G.L.4
  • 17
    • 3042806881 scopus 로고    scopus 로고
    • Diversity of picoplanktonic prasinophytes assessed by direct nuclear SSU rDNA sequencing of environmental samples and novel isolates retrieved from oceanic and coastal marine ecosystems
    • Guillou L., Eikrem W., Chretiennot-Dinet M.-J., Le Gall F., Massana R., Romari K., Pedros-Alio C., Vaulot D. Diversity of picoplanktonic prasinophytes assessed by direct nuclear SSU rDNA sequencing of environmental samples and novel isolates retrieved from oceanic and coastal marine ecosystems. Protist 2004, 155:193-214.
    • (2004) Protist , vol.155 , pp. 193-214
    • Guillou, L.1    Eikrem, W.2    Chretiennot-Dinet, M.-J.3    Le Gall, F.4    Massana, R.5    Romari, K.6    Pedros-Alio, C.7    Vaulot, D.8
  • 18
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Res 1999, 41:95-98.
    • (1999) Nucleic Acids Res , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 19
    • 0001567454 scopus 로고    scopus 로고
    • Prasinoderma coloniale gen. et sp. nov., a new pelagic coccoid prasinophyte from the western Pacific Ocean
    • Hasegawa T., Miyashita H., Kawachi M., Ikemoto H., Kurano N., Miyachi S., Chihara M. Prasinoderma coloniale gen. et sp. nov., a new pelagic coccoid prasinophyte from the western Pacific Ocean. Phycologia 1996, 35:170-176.
    • (1996) Phycologia , vol.35 , pp. 170-176
    • Hasegawa, T.1    Miyashita, H.2    Kawachi, M.3    Ikemoto, H.4    Kurano, N.5    Miyachi, S.6    Chihara, M.7
  • 20
    • 0034849408 scopus 로고    scopus 로고
    • MRBAYES: Bayesian inference of phylogenetic trees
    • Huelsenbeck J.P., Ronquist F. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 2001, 17:754-755.
    • (2001) Bioinformatics , vol.17 , pp. 754-755
    • Huelsenbeck, J.P.1    Ronquist, F.2
  • 21
    • 0036395090 scopus 로고    scopus 로고
    • Distribution of rRNA introns in the three-dimensional structure of the ribosome
    • Jackson S.A., Cannone J.J., Lee J.C., Gutell R.R., Woodson S.A. Distribution of rRNA introns in the three-dimensional structure of the ribosome. J Mol Biol 2002, 323:35-52.
    • (2002) J Mol Biol , vol.323 , pp. 35-52
    • Jackson, S.A.1    Cannone, J.J.2    Lee, J.C.3    Gutell, R.R.4    Woodson, S.A.5
  • 22
    • 0034963078 scopus 로고    scopus 로고
    • A new nomenclature of group I introns in ribosomal DNA
    • Johansen S., Haugen P. A new nomenclature of group I introns in ribosomal DNA. RNA 2001, 7:935-936.
    • (2001) RNA , vol.7 , pp. 935-936
    • Johansen, S.1    Haugen, P.2
  • 23
  • 25
    • 11144274477 scopus 로고    scopus 로고
    • Pigment suites and taxonomic groups in Prasinophyceae
    • Latasa M., Scharek R., Le Gall F., Guillou L. Pigment suites and taxonomic groups in Prasinophyceae. J Phycol 2004, 40:1149-1155.
    • (2004) J Phycol , vol.40 , pp. 1149-1155
    • Latasa, M.1    Scharek, R.2    Le Gall, F.3    Guillou, L.4
  • 27
    • 70449596504 scopus 로고    scopus 로고
    • Photosynthetic picoeucaryote community structure in the South East Pacific Ocean encompassing the most oligotrophic waters on Earth
    • Lepère C., Vaulot D., Scanlan D. Photosynthetic picoeucaryote community structure in the South East Pacific Ocean encompassing the most oligotrophic waters on Earth. Environ Microbiol 2009, 11:3105-3117.
    • (2009) Environ Microbiol , vol.11 , pp. 3105-3117
    • Lepère, C.1    Vaulot, D.2    Scanlan, D.3
  • 28
    • 0002176211 scopus 로고    scopus 로고
    • DNA/RNA analysis of phytoplankton by flow cytometry
    • Wiley, New York, J.P. Robinson, Z. Darzynkiewicz, P.N. Dean, A. Orfao, P.S. Rabinovitch, C.C. Stewart, H.J. Tanke, L.L. Wheeless (Eds.)
    • Marie D., Simon N., Guillou L., Partensky F., Vaulot D. DNA/RNA analysis of phytoplankton by flow cytometry. Current Protocols in Cytometry, Chapter 11.12 2000, 1-18. Wiley, New York. J.P. Robinson, Z. Darzynkiewicz, P.N. Dean, A. Orfao, P.S. Rabinovitch, C.C. Stewart, H.J. Tanke, L.L. Wheeless (Eds.).
    • (2000) Current Protocols in Cytometry, Chapter 11.12 , pp. 1-18
    • Marie, D.1    Simon, N.2    Guillou, L.3    Partensky, F.4    Vaulot, D.5
  • 29
    • 77249178136 scopus 로고    scopus 로고
    • Molecular phylogeny and classification of the Mamiellophyceae class. nov. (Chlorophyta) based on sequence comparisons of the nuclear- and plastid-encoded rRNA operons
    • Marin B., Melkonian M. Molecular phylogeny and classification of the Mamiellophyceae class. nov. (Chlorophyta) based on sequence comparisons of the nuclear- and plastid-encoded rRNA operons. Protist 2009, 161:304-336.
    • (2009) Protist , vol.161 , pp. 304-336
    • Marin, B.1    Melkonian, M.2
  • 31
    • 36148986480 scopus 로고    scopus 로고
    • Phylogeny and ultrastructure of Nephroselmis and Pseudoscourfieldia (Chlorophyta), including the description of Nephroselmis anterostigmatica sp. nov. and a proposal for the Nephroselmidales ord. nov
    • Nakayama T., Suda S., Kawachi M., Inouye I. Phylogeny and ultrastructure of Nephroselmis and Pseudoscourfieldia (Chlorophyta), including the description of Nephroselmis anterostigmatica sp. nov. and a proposal for the Nephroselmidales ord. nov. Phycologia 2007, 46:680-697.
    • (2007) Phycologia , vol.46 , pp. 680-697
    • Nakayama, T.1    Suda, S.2    Kawachi, M.3    Inouye, I.4
  • 32
    • 3242795220 scopus 로고    scopus 로고
    • A single species, Micromonas pusilla (Prasinophyceae), dominates the eukaryotic picoplankton in the western English Channel
    • Not F., Latasa M., Marie D., Cariou T., Vaulot D., Simon N. A single species, Micromonas pusilla (Prasinophyceae), dominates the eukaryotic picoplankton in the western English Channel. Appl Environ Microbiol 2004, 70:4064-4072.
    • (2004) Appl Environ Microbiol , vol.70 , pp. 4064-4072
    • Not, F.1    Latasa, M.2    Marie, D.3    Cariou, T.4    Vaulot, D.5    Simon, N.6
  • 33
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: testing the model of DNA substitution
    • Posada D., Crandall K.A. MODELTEST: testing the model of DNA substitution. Bioinformatics 1998, 14:817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 34
    • 33750619396 scopus 로고    scopus 로고
    • Size-fractionated phytoplankton pigment groups in the NW Iberian upwelling system: impact of the Iberian Poleward Current
    • Rodriguez F., Garrido J.L., Crespo B.G., Arbones B., Figueiras F.G. Size-fractionated phytoplankton pigment groups in the NW Iberian upwelling system: impact of the Iberian Poleward Current. Mar Ecol Prog Ser 2006, 323:59-73.
    • (2006) Mar Ecol Prog Ser , vol.323 , pp. 59-73
    • Rodriguez, F.1    Garrido, J.L.2    Crespo, B.G.3    Arbones, B.4    Figueiras, F.G.5
  • 35
    • 2942562373 scopus 로고    scopus 로고
    • Composition and temporal variability of picoeukaryote communities at a coastal site of the English Channel from 18S rDNA sequences
    • Romari K., Vaulot D. Composition and temporal variability of picoeukaryote communities at a coastal site of the English Channel from 18S rDNA sequences. Limnol Oceanogr 2004, 49:784-798.
    • (2004) Limnol Oceanogr , vol.49 , pp. 784-798
    • Romari, K.1    Vaulot, D.2
  • 36
    • 19444376642 scopus 로고    scopus 로고
    • Evaluation of the sensitivity of marine microalgal strains to the heavy metals, Cu, As, Sb, Pb and Cd
    • Satoh A., Vudikaria L.Q., Kurano N., Miyachi S. Evaluation of the sensitivity of marine microalgal strains to the heavy metals, Cu, As, Sb, Pb and Cd. Environ Int 2005, 31:713-722.
    • (2005) Environ Int , vol.31 , pp. 713-722
    • Satoh, A.1    Vudikaria, L.Q.2    Kurano, N.3    Miyachi, S.4
  • 37
    • 0032735313 scopus 로고    scopus 로고
    • Widespread occurence of the oceanic ultraplankter, Prasinococcus capsulatus (Prasinophyceae), the diagnostic " Golgi-decapore complex" and the newly described polysaccharide " capsulan"
    • Sieburth J.M., Keller M.D., Johnson P.W., Myklestad S.M. Widespread occurence of the oceanic ultraplankter, Prasinococcus capsulatus (Prasinophyceae), the diagnostic " Golgi-decapore complex" and the newly described polysaccharide " capsulan" J Phycol 1999, 35:1032-1043.
    • (1999) J Phycol , vol.35 , pp. 1032-1043
    • Sieburth, J.M.1    Keller, M.D.2    Johnson, P.W.3    Myklestad, S.M.4
  • 38
    • 78650418163 scopus 로고    scopus 로고
    • PAUP* Phylogenetic Analysis Using Parsimony (*and other methods) Version 4. Sinauer Associates, Sunderland, Massachusetts.
    • Swofford DL (2000) PAUP* Phylogenetic Analysis Using Parsimony (*and other methods) Version 4. Sinauer Associates, Sunderland, Massachusetts.
    • (2000)
    • Swofford, D.L.1
  • 40
    • 0026365041 scopus 로고
    • Micromonas pusilla (Prasinophyceae) as part of pico- and nanoplankton communities of the Barents Sea
    • Throndsen J., Kristiansen S. Micromonas pusilla (Prasinophyceae) as part of pico- and nanoplankton communities of the Barents Sea. Polar Res 1991, 10:201-207.
    • (1991) Polar Res , vol.10 , pp. 201-207
    • Throndsen, J.1    Kristiansen, S.2
  • 41
    • 49649093132 scopus 로고    scopus 로고
    • The diversity of small eukaryotic phytoplankton (<3μm) in marine ecosystems
    • Vaulot D., Eikrem W., Viprey M., Moreau H. The diversity of small eukaryotic phytoplankton (<3μm) in marine ecosystems. FEMS Microbiol Rev 2008, 32:795-820.
    • (2008) FEMS Microbiol Rev , vol.32 , pp. 795-820
    • Vaulot, D.1    Eikrem, W.2    Viprey, M.3    Moreau, H.4
  • 42
    • 44849104595 scopus 로고    scopus 로고
    • Wide genetic diversity of picoplanktonic green algae (Chloroplastida) in the Mediterranean Sea uncovered by a phylum-biased PCR approach
    • Viprey M., Guillou L., Ferreol M., Vaulot D. Wide genetic diversity of picoplanktonic green algae (Chloroplastida) in the Mediterranean Sea uncovered by a phylum-biased PCR approach. Environ Microbiol 2008, 10:1804-1822.
    • (2008) Environ Microbiol , vol.10 , pp. 1804-1822
    • Viprey, M.1    Guillou, L.2    Ferreol, M.3    Vaulot, D.4
  • 44
    • 23944450878 scopus 로고    scopus 로고
    • Late type of daughter cell wall synthesis in one of the Chlorellaceae, Parachlorella kessleri (Chlorophyta, Trebouxiophyceae)
    • Yamamoto M., Kurihara I., Kawano S. Late type of daughter cell wall synthesis in one of the Chlorellaceae, Parachlorella kessleri (Chlorophyta, Trebouxiophyceae). Planta 2005, 221:766-775.
    • (2005) Planta , vol.221 , pp. 766-775
    • Yamamoto, M.1    Kurihara, I.2    Kawano, S.3
  • 45
    • 0034737351 scopus 로고    scopus 로고
    • Separation of chlorophylls and carotenoids from marine phytoplankton: a new HPLC method using a reverse-phase C8 column and pyridine-containing mobile phases
    • Zapata M., Rodriguez F., Garrido J. Separation of chlorophylls and carotenoids from marine phytoplankton: a new HPLC method using a reverse-phase C8 column and pyridine-containing mobile phases. Mar Ecol Prog Ser 2000, 195:29-45.
    • (2000) Mar Ecol Prog Ser , vol.195 , pp. 29-45
    • Zapata, M.1    Rodriguez, F.2    Garrido, J.3
  • 46
    • 0036805522 scopus 로고    scopus 로고
    • Phylogenetic position of Crustomastix stigmatica sp. nov. and Dolichomastix tenuilepis in relation to the Mamiellales (Prasinophyceae, Chlorophyta)
    • Zingone A., Borra M., Brunet C., Forlani G., Kooistra W.H.C.F., Procaccini G. Phylogenetic position of Crustomastix stigmatica sp. nov. and Dolichomastix tenuilepis in relation to the Mamiellales (Prasinophyceae, Chlorophyta). J Phycol 2002, 38:1024-1039.
    • (2002) J Phycol , vol.38 , pp. 1024-1039
    • Zingone, A.1    Borra, M.2    Brunet, C.3    Forlani, G.4    Kooistra, W.H.C.F.5    Procaccini, G.6


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