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Volumn 1, Issue 1, 2010, Pages 1597-1606

Free energy computation by controlled Langevin dynamics

Author keywords

Free energy sampling; Jarzynski's identity; Optimal control; Stochastic Langevin dynamics

Indexed keywords

EQUATIONS OF MOTION; HAMILTONIANS; NUMERICAL METHODS; STOCHASTIC SYSTEMS;

EID: 78650289047     PISSN: None     EISSN: 18770509     Source Type: Conference Proceeding    
DOI: 10.1016/j.procs.2010.04.179     Document Type: Conference Paper
Times cited : (8)

References (16)
  • 2
    • 4243754128 scopus 로고    scopus 로고
    • Nonequilibrium equality for free energy differences
    • C. Jarzynski, Nonequilibrium equality for free energy differences, Phys. Rev. Lett. 78 (1996) 2690-2693.
    • (1996) Phys. Rev. Lett. , vol.78 , pp. 2690-2693
    • Jarzynski, C.1
  • 3
    • 4244116139 scopus 로고    scopus 로고
    • Equilibrium free energy differences from nonequilibrium measurements: A master-equation approach
    • C. Jarzynski, Equilibrium free energy differences from nonequilibrium measurements: A master-equation approach, Phys. Rev. E 56 (1997) 5018-5035.
    • (1997) Phys. Rev. E , vol.56 , pp. 5018-5035
    • Jarzynski, C.1
  • 4
    • 0035957434 scopus 로고    scopus 로고
    • Free energy reconstruction from nonequilibrium single-molecule pulling experiments
    • G. Hummer, A. Szabo, Free energy reconstruction from nonequilibrium single-molecule pulling experiments, PNAS 98 (2001) 3658-3661.
    • (2001) PNAS , vol.98 , pp. 3658-3661
    • Hummer, G.1    Szabo, A.2
  • 5
    • 4143087050 scopus 로고    scopus 로고
    • Calculating potentials of mean force from steered molecular dynamics simulations
    • S. Park, K. Schulten, Calculating potentials of mean force from steered molecular dynamics simulations., J. Chem. Phys 120 (2004) 5946-5961.
    • (2004) J. Chem. Phys , vol.120 , pp. 5946-5961
    • Park, S.1    Schulten, K.2
  • 7
    • 65549103385 scopus 로고    scopus 로고
    • The work-Hamiltonian connection and the usefulness of the Jarzynski equality for free energy calculations
    • 171102
    • E. Zimanyi, R. Silbey, The work-Hamiltonian connection and the usefulness of the Jarzynski equality for free energy calculations, J. Chem. Phys 130 (171102).
    • J. Chem. Phys , vol.130
    • Zimanyi, E.1    Silbey, R.2
  • 8
    • 33646471468 scopus 로고
    • Statistical mechanics of fluid mixtures
    • J. Kirkwood, Statistical mechanics of fluid mixtures, J. Chem. Phys 3 (1935) 300-313.
    • (1935) J. Chem. Phys , vol.3 , pp. 300-313
    • Kirkwood, J.1
  • 9
    • 33847239163 scopus 로고    scopus 로고
    • Computation of free energy differences through nonequilibrium stochastic dynamics: The reaction coordinate case
    • T. Lelièvre, M. Rousset, G. Stoltz, Computation of free energy differences through nonequilibrium stochastic dynamics: The reaction coordinate case, J. Comput. Phys. 222 (2007) 624-643.
    • (2007) J. Comput. Phys. , vol.222 , pp. 624-643
    • Lelièvre, T.1    Rousset, M.2    Stoltz, G.3
  • 10
    • 0035635869 scopus 로고    scopus 로고
    • Multi-multiplier ambient-space formulations of constrained dynamical systems, with an application to elastodynamics
    • O. Gonzalez, J. Maddocks, R. Pego, Multi-multiplier ambient-space formulations of constrained dynamical systems, with an application to elastodynamics, Arch. Rational Mech. Anal. 157 (2001) 285-323.
    • (2001) Arch. Rational Mech. Anal. , vol.157 , pp. 285-323
    • Gonzalez, O.1    Maddocks, J.2    Pego, R.3
  • 15
    • 0001109804 scopus 로고    scopus 로고
    • Risk sensitive asset management with transaction costs
    • T. Bielecki, S. Pliska, Risk sensitive asset management with transaction costs, Finance Stoch. 4 (2000) 1-33.
    • (2000) Finance Stoch. , vol.4 , pp. 1-33
    • Bielecki, T.1    Pliska, S.2
  • 16
    • 0028401187 scopus 로고
    • Risk-sensitivity, large deviations and stochastic control
    • P. Whittle, Risk-sensitivity, large deviations and stochastic control, Eur. J. Oper. Res. 73 (1994) 295-303.
    • (1994) Eur. J. Oper. Res. , vol.73 , pp. 295-303
    • Whittle, P.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.