Purification and characterization of κ-carrageenase from the marine bacterium Pseudoalteromonas porphyrae for hydrolysis of κ-carrageenan

Process Biochemistry

Volumn 46, Issue 1, 2011, Pages 265-271

  Liu, Guang Lei ^a   Li, Yang ^a   Chi, Zhe ^a   Chi, Zhen Ming ^a  

^a OCEAN UNIVERSITY OF CHINA   (China)

Author keywords

Carrageenase; Characterization; Marine bacterium; Pseudoalteromonas porphyrae; Purification

Indexed keywords

AMINO ACID SEQUENCE; ANION EXCHANGE CHROMATOGRAPHY; BACTERIAL STRAINS; CARRAGEENANS; EXTRACELLULAR; GEL-FILTRATION CHROMATOGRAPHY; IODOACETIC ACID; MARINE BACTERIUM; PHENANTHROLINES; PHENYLMETHYLSULFONYL FLUORIDE; PSEUDOALTEROMONAS; PURIFIED ENZYME; SODIUM DODECYL SULFATE-POLYACRYLAMIDE GEL ELECTROPHORESIS; TETRASACCHARIDES; YELLOW SEA;

AMINO ACIDS; BARIUM; CELL CULTURE; CHROMATOGRAPHY; ELECTROPHORESIS; ENZYME ACTIVITY; ENZYMES; GEL PERMEATION CHROMATOGRAPHY; GELS; GENE ENCODING; PURIFICATION; SODIUM; ULTRAFILTRATION;

BACTERIA;

BACTERIA (MICROORGANISMS); PSEUDOALTEROMONAS; PSEUDOALTEROMONAS PORPHYRAE;

EID: 78650240108     PISSN: 13595113     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.procbio.2010.08.021     Document Type: Article

References (24)

1. T. Barbeyron, G. Gurvan Michel, P. Philippe Potin, B. Bernard Henrissat, and B. Bernard Kloareg ι-Carrageenases constitute a novel family of glycoside hydrolases, unrelated to that of κ-carrageenases J Biol Chem 27 2000 35499 35505
2. H. Mou, X. Jiang, and H. Guan A κ-carrageenan derived oligosaccharide prepared by enzymatic degradation containing anti-tumor activity J Appl Phycol 15 2003 297 303
3. M.H. Zhou, J.S. Ma, J. Li, H.R. Ye, K.X. Huang, and X.W. Zhao A κ-Carrageenase from a newly isolated Pseudoalteromonas-like bacterium, WZUC10 Biotechnol Bioproc Eng 13 2008 545 551
4. G. Michel, P. Nyval-Collen, T. Barbeyron, M. Czjzek, and W. Helbert Bioconversion of red seaweed galactans: a focus on bacterial agarases and carrageenases Appl Microbiol Biotechnol 71 2006 23 33
5. F. Zhang, J. Chen, Z.M. Chi, and L. Wu Expression and processing of Vibrio anguillarum zinc-metalloprotease in Escherichia coli Arch Microbiol 186 2006 11 20
6. K. Tamura, J. Dudley, M. Nei, and S. Kumar MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0 Mol Biol Evol 24 2007 1596 1599
7. R.G. Spiro Analysis of sugars found in glycoproteins Meth Enzymol 8 1966 3 26
8. M.M. Bradford A rapid and sensitive method for quantitation of microgram quantities of protein utilizing the principle of protein dye binding Anal Biochem 72 1976 248 253
9. U.K. Laemmli Cleavage of structural proteins during assembly of head of bacteriophage T4 Nature 227 1970 680 685
10. V. George, and A.M. Diwan Simultaneous staining of proteins during polyacrylamide gel electrophoresis in acidic gels by countermigration of Coomassie brilliant blue R-250 Anal Biochem 132 1983 481 483
11. F. Gong, J. Sheng, Z.M. Chi, and J. Li Inulinase production by a marine yeast Pichia guilliermondii and inulin hydrolysis by the crude inulinase J Indu Microbiol Biotechnol 34 2007 179 185
12. J. Sambrook, E.F. Fritsch, and T. Maniatis Molecular cloning: a laboratory manual 2nd ed. 1989 Cold Spring Harbor Laboratory Press Beijing pp. 367-370 (Chinese translating ed.)
13. G. Sarwar, T. Sakata, and D. Kasimoto The production and characteristics of carrageenase from marine Cytophaga Bull Jpn Sot Sci Fish 49 1983 1689 1694
14. P. Potin, A. Sanseau, Y. Le Gall, C. Rochas, and B. Kloareg Purification and characterization of a new kappa-carrageenase from a marine Cytophaga-like bacterium Eur J Biochem 201 1991 241 247
15. T. Barbeyron, B. Henrissat, and B. Kloareg The gene encoding the kappa-carrageenase of Alteromonas carrageenovora is related to β-1,3-1,4-glucanase Gene 139 1994 105 109
16. Y. Khambhaty, K. Mody, B. Jha, and V. Gohel Statistical optimization of medium components for κ-carrageenase production by Pseudomonas elongata Enzy Microb Technol 40 2007 813 822
17. G. Sarwar, S. Matayoshi, and H. Oda Purification of κ-carrageenase from a marine Cytophaga species Microbiol Immunol 31 1987 869 877
18. T. Araki, Y. Higashimoto, and T. Morishita Purification and characterization of κ-carrageenase from a marine bacterium, Vibrio sp. CA-1004 Fish Sci 65 1999 937 942
19. C. Sharon, S. Furugoh, T. Yamakido, H. Ogawa, and Y. Kato Purification and characterization of a lipase from Pseudomonas aeruginosa KKA-5 and its role in castor oil hydrolysis J Ind Microbiol Biotechnol 20 1998 304 307
20. G. Barth, and C. Gaillardin Physiology and genetics of the dimorphic fungus Yarrowia lipolytica FEMS Microbiol Rev 19 1997 219 237
21. B. Ramirez-Zavala, Y. Mercado-Flores, C. Hernadez-Rodriguez, and L. Villa-Tanaca Purification and characterization of lysine aminopeptidase from Kluyveromyces marxiamus FEMS Microbiol Lett 235 2004 369 375
22. M.W. McLean, and F.B. Williamson κ-Carrageenase from Pseudomonas carrageenovora Eur J Biochem 93 1979 553 558
23. J. Weigl, and W. Yaphe The enzymic hydrolysis of carrageenan by Pseudomonas carrageenovora: purification of a kappa-carrageenase Can J Microbiol 12 1966 939 947
24. T. Barbeyron, A. Gerard, P. Potin, B. Henrissat, and B. Kloareg The kappa-carrageenase of the marine bacterium Cytophaga drobachiensis. Structural and phylogenetic relationships within family-16 glycoside hydrolases Mol Biol Evol 15 1998 528 537