메뉴 건너뛰기




Volumn 60, Issue 12, 2010, Pages 2951-2959

Granulicella paludicola gen. nov., sp. nov., Granulicella pectinivorans sp. nov., Granulicella aggregans sp. nov. and Granulicella rosea sp. nov., acidophilic, polymer-degrading acidobacteria from Sphagnum peat bogs

Author keywords

[No Author keywords available]

Indexed keywords

CAROTENOID; FATTY ACID; GENOMIC DNA; MENAQUINONE; NOVOBIOCIN; RNA 16S; BACTERIAL DNA; FARNOQUINONE; POLYSACCHARIDE; VITAMIN MK 8;

EID: 78650071259     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.021824-0     Document Type: Article
Times cited : (123)

References (33)
  • 1
    • 0032963409 scopus 로고    scopus 로고
    • Wide distribution and diversity of members of the bacterial kingdom Acidobacterium in the environment
    • Barns, S. M., Takala, S. L. & Kuske, C. R. (1999). Wide distribution and diversity of members of the bacterial kingdom Acidobacterium in the environment. Appl Environ Microbiol 65, 1731-1737.
    • (1999) Appl Environ Microbiol , vol.65 , pp. 1731-1737
    • Barns, S.M.1    Takala, S.L.2    Kuske, C.R.3
  • 2
    • 34248225741 scopus 로고    scopus 로고
    • Acidobacteria phylum sequences in uranium-contaminated subsurface sediments greatly expand the known diversity within the phylum
    • DOI 10.1128/AEM.02012-06
    • Barns, S. M., Cain, E. C., Sommerville, L. & Kuske, C. R. (2007). Acidobacteria phylum sequences in uranium-contaminated subsurface sediments greatly expand the known diversity within the phylum. Appl Environ Microbiol 73, 3113-3116. (Pubitemid 46718601)
    • (2007) Applied and Environmental Microbiology , vol.73 , Issue.9 , pp. 3113-3116
    • Barns, S.M.1    Cain, E.C.2    Sommerville, L.3    Kuske, C.R.4
  • 4
    • 0032733240 scopus 로고    scopus 로고
    • Geothrix fermentans gen. nov., sp. nov., a novel Fe(III)-reducing bacterium from a hydrocarbon-contaminated aquifer
    • Coates, J. D., Ellis, D. J., Gaw, C. V. & Lovley, D. R. (1999). Geothrix fermentans gen. nov., sp. nov., a novel Fe(III)-reducing bacterium from a hydrocarbon-contaminated aquifer. Int J Syst Bacteriol 49, 1615-1622.
    • (1999) Int J Syst Bacteriol , vol.49 , pp. 1615-1622
    • Coates, J.D.1    Ellis, D.J.2    Gaw, C.V.3    Lovley, D.R.4
  • 5
    • 0014713693 scopus 로고
    • The quantitative measurement of DNA hybridization from renaturation rates
    • De Ley, J., Cattoir, K. & Reynaerts, A. (1970). The quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133-142.
    • (1970) Eur J Biochem , vol.12 , pp. 133-142
    • De Ley, J.1    Cattoir, K.2    Reynaerts, A.3
  • 6
    • 33644942303 scopus 로고    scopus 로고
    • Phylogenetic analysis and in situ identification of bacteria community composition in an acidic Sphagnum peat bog
    • Dedysh, S. N., Pankratov, T. A., Kulichevskaya, I. S., Belova, S. E. & Liesack, W. (2006). Phylogenetic analysis and in situ identification of bacteria community composition in an acidic Sphagnum peat bog. Appl Environ Microbiol 72, 2110-2117.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 2110-2117
    • Dedysh, S.N.1    Pankratov, T.A.2    Kulichevskaya, I.S.3    Belova, S.E.4    Liesack, W.5
  • 7
    • 34247606048 scopus 로고    scopus 로고
    • Isolation and characterization of soil bacteria that define Terriglobus gen. nov., in the phylum Acidobacteria
    • Eichorst, S. A., Breznak, J. A. & Schmidt, T. M. (2007). Isolation and characterization of soil bacteria that define Terriglobus gen. nov., in the phylum Acidobacteria. Appl Environ Microbiol 73, 2708-2717.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 2708-2717
    • Eichorst, S.A.1    Breznak, J.A.2    Schmidt, T.M.3
  • 8
    • 0000122573 scopus 로고
    • PHYLIP - Phylogeny inference package
    • version 3.2
    • Felsenstein, J. (1989). PHYLIP - phylogeny inference package (version 3.2). Cladistics 5, 164-166.
    • (1989) Cladistics , vol.5 , pp. 164-166
    • Felsenstein, J.1
  • 9
    • 55849095838 scopus 로고    scopus 로고
    • Acanthopleuribacter pedis gen. nov., sp. nov., a marine bacterium isolated from a chiton, and description of Acanthopleuribacteraceae fam. nov., Acanthopleuribacterales ord. nov., Holophagaceae fam. nov., Holophagales ord. nov. and Holophagae classis nov. in the phylum 'Acidobacteria'
    • Fukunaga, Y., Kurahashi, M., Yanagi, K., Yokota, A. & Harayama, Sh. (2008). Acanthopleuribacter pedis gen. nov., sp. nov., a marine bacterium isolated from a chiton, and description of Acanthopleuribacteraceae fam. nov., Acanthopleuribacterales ord. nov., Holophagaceae fam. nov., Holophagales ord. nov. and Holophagae classis nov. in the phylum 'Acidobacteria'. Int J Syst Evol Microbiol 58, 2597-2601.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 2597-2601
    • Fukunaga, Y.1    Kurahashi, M.2    Yanagi, K.3    Yokota, A.4    Harayama, Sh.5
  • 11
    • 0031912606 scopus 로고    scopus 로고
    • Novel division level bacterial diversity in a Yellowstone hot spring
    • Hugenholtz, P., Pitulle, C., Hershberger, K. L. & Pace, N. R. (1998). Novel division level bacterial diversity in a Yellowstone hot spring. J Bacteriol 180, 366-376.
    • (1998) J Bacteriol , vol.180 , pp. 366-376
    • Hugenholtz, P.1    Pitulle, C.2    Hershberger, K.L.3    Pace, N.R.4
  • 12
    • 33644952722 scopus 로고    scopus 로고
    • Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes
    • Janssen, P. H. (2006). Identifying the dominant soil bacterial taxa in libraries of 16S rRNA and 16S rRNA genes. Appl Environ Microbiol 72, 1719-1728.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 1719-1728
    • Janssen, P.H.1
  • 13
    • 0029799185 scopus 로고    scopus 로고
    • Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa
    • Kämpfer, P. & Kroppenstedt, R. M. (1996). Numerical analysis of fatty acid patterns of coryneform bacteria and related taxa. Can J Microbiol 42, 989-1005.
    • (1996) Can J Microbiol , vol.42 , pp. 989-1005
    • Kämpfer, P.1    Kroppenstedt, R.M.2
  • 14
    • 0026080952 scopus 로고
    • Acidobacterium capsulatum gen. nov., sp. nov.: An acidophilic chemoorganotrophic bacterium containing menaquinone from acidic mineral environment
    • Kishimoto, N., Kosako, Y. & Tano, T. (1991). Acidobacterium capsulatum gen. nov., sp. nov.: an acidophilic chemoorganotrophic bacterium containing menaquinone from acidic mineral environment. Curr Microbiol 22, 1-7.
    • (1991) Curr Microbiol , vol.22 , pp. 1-7
    • Kishimoto, N.1    Kosako, Y.2    Tano, T.3
  • 16
    • 47049112538 scopus 로고    scopus 로고
    • Edaphobacter modestus gen. nov., sp. nov., and Edaphobacter aggregans sp. nov., acidobacteria isolated from alpine and forest soils
    • Koch, I. H., Gich, F., Dunfield, P. F. & Overmann, J. (2008). Edaphobacter modestus gen. nov., sp. nov., and Edaphobacter aggregans sp. nov., acidobacteria isolated from alpine and forest soils. Int J Syst Evol Microbiol 58, 1114-1122.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 1114-1122
    • Koch, I.H.1    Gich, F.2    Dunfield, P.F.3    Overmann, J.4
  • 17
    • 76549113040 scopus 로고    scopus 로고
    • Bryobacter aggregatus gen. nov., sp. nov., a peat-inhabiting, aerobic chemo-organotroph from subdivision 3 of the Acidobacteria
    • Kulichevskaya, I. S., Suzina, N. E., Liesack, W. & Dedysh, S. N. (2010). Bryobacter aggregatus gen. nov., sp. nov., a peat-inhabiting, aerobic chemo-organotroph from subdivision 3 of the Acidobacteria. Int J Syst Evol Microbiol 60, 301-306.
    • (2010) Int J Syst Evol Microbiol , vol.60 , pp. 301-306
    • Kulichevskaya, I.S.1    Suzina, N.E.2    Liesack, W.3    Dedysh, S.N.4
  • 18
    • 67651247607 scopus 로고    scopus 로고
    • Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale
    • Lauber, C. L., Hamady, M., Knight, R. & Fierer, N. (2009). Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale. Appl Environ Microbiol 75, 5111-5120.
    • (2009) Appl Environ Microbiol , vol.75 , pp. 5111-5120
    • Lauber, C.L.1    Hamady, M.2    Knight, R.3    Fierer, N.4
  • 19
    • 0027937278 scopus 로고
    • Holophaga foetida gen. nov., sp. nov., a new homoacetogenic bacterium degrading methoxylated aromatic compounds
    • Liesack, W., Bak, F., Kreft, J. U. & Stackebrandt, E. (1994). Holophaga foetida gen. nov., sp. nov., a new homoacetogenic bacterium degrading methoxylated aromatic compounds. Arch Microbiol 162, 85-90.
    • (1994) Arch Microbiol , vol.162 , pp. 85-90
    • Liesack, W.1    Bak, F.2    Kreft, J.U.3    Stackebrandt, E.4
  • 21
    • 0002674802 scopus 로고
    • Electron microscopy of cell extraneous coats as revealed by ruthenium red staining
    • Luft, J. H. (1964). Electron microscopy of cell extraneous coats as revealed by ruthenium red staining. J Cell Biol 23, 54A-55A.
    • (1964) J Cell Biol , vol.23
    • Luft, J.H.1
  • 22
    • 29144436638 scopus 로고    scopus 로고
    • Identification of bacteria in biofilm and bulk water samples from a nonchlorinated model drinking water distribution system: Detection of a large nitrite-oxidizing population associated with Nitrospira spp
    • DOI 10.1128/AEM.71.12.8611-8617.2005
    • Martiny, A. C., Albrechtsen, H.-J., Arvin, E. & Molin, S. (2005). Identification of bacteria in biofilm and bulk water samples from a nonchlorinated model drinking water distribution system: detection of a large nitriteoxidizing population associated with Nitrospira spp. Appl Environ Microbiol 71, 8611-8617. (Pubitemid 41803995)
    • (2005) Applied and Environmental Microbiology , vol.71 , Issue.12 , pp. 8611-8617
    • Martiny, A.C.1    Albrechtsen, H.-J.2    Arvin, E.3    Molin, S.4
  • 23
    • 34248597469 scopus 로고    scopus 로고
    • In situ detection of novel Acidobacteria in microbial mats from a chemolithoautotrophically based cave ecosystem (Lower Kane Cave, WY, USA)
    • Meisinger, D. B., Zimmermann, J., Ludwig, W., Schleifer, K.-H., Wanner, G., Schmid, M., Bennett, P. C., Engel, A. S. & Lee, N. M. (2007). In situ detection of novel Acidobacteria in microbial mats from a chemolithoautotrophically based cave ecosystem (Lower Kane Cave, WY, USA). Environ Microbiol 9, 1523-1534.
    • (2007) Environ Microbiol , vol.9 , pp. 1523-1534
    • Meisinger, D.B.1    Zimmermann, J.2    Ludwig, W.3    Schleifer, K.-H.4    Wanner, G.5    Schmid, M.6    Bennett, P.C.7    Engel, A.S.8    Lee, N.M.9
  • 24
    • 0014460729 scopus 로고
    • Determination of base composition from melting profiles in dilute buffers
    • Owen, R. J., Lapage, S. P. & Hill, L. R. (1969). Determination of base composition from melting profiles in dilute buffers. Biopolymers 7, 503-516.
    • (1969) Biopolymers , vol.7 , pp. 503-516
    • Owen, R.J.1    Lapage, S.P.2    Hill, L.R.3
  • 25
    • 35648957676 scopus 로고    scopus 로고
    • Mucilaginibacter paludis gen. nov., sp. nov. and Mucilaginibacter gracilis sp. nov., pectin-, xylan- and laminarin-degrading members of the family Sphingobacteriaceae from acidic Sphagnum peat bog
    • Pankratov, T. A., Tindall, B. J., Liesack, W. & Dedysh, S. N. (2007). Mucilaginibacter paludis gen. nov., sp. nov. and Mucilaginibacter gracilis sp. nov., pectin-, xylan- and laminarin-degrading members of the family Sphingobacteriaceae from acidic Sphagnum peat bog. Int J Syst Evol Microbiol 57, 2349-2354.
    • (2007) Int J Syst Evol Microbiol , vol.57 , pp. 2349-2354
    • Pankratov, T.A.1    Tindall, B.J.2    Liesack, W.3    Dedysh, S.N.4
  • 26
    • 43449101881 scopus 로고    scopus 로고
    • Substrate-induced growth and isolation of Acidobacteria from acidic Sphagnum peat
    • Pankratov, T. A., Serkebaeva, Y. M., Kulichevskaya, I. S., Liesack, W. & Dedysh, S. N. (2008). Substrate-induced growth and isolation of Acidobacteria from acidic Sphagnum peat. ISME J 2, 551-560.
    • (2008) ISME J , vol.2 , pp. 551-560
    • Pankratov, T.A.1    Serkebaeva, Y.M.2    Kulichevskaya, I.S.3    Liesack, W.4    Dedysh, S.N.5
  • 28
    • 0020375189 scopus 로고
    • Survival stages of a psychrotrophic Cytophaga johnsonae strain
    • Reichardt, W. & Morita, R. Y. (1982). Survival stages of a psychrotrophic Cytophaga johnsonae strain. Can J Microbiol 28, 841-850.
    • (1982) Can J Microbiol , vol.28 , pp. 841-850
    • Reichardt, W.1    Morita, R.Y.2
  • 29
    • 0000561885 scopus 로고    scopus 로고
    • The order Cytophagales
    • 3rd edn, Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer
    • Reichenbach, H. (2006). The order Cytophagales. In The Prokaryotes: a Handbook on the Biology of Bacteria, 3rd edn, vol. 7, pp. 549-590. Edited by M. Dworkin, S. Falkow, E. Rosenberg, K. H. Schleifer & E. Stackebrandt. New York: Springer.
    • (2006) The Prokaryotes: A Handbook on the Biology of Bacteria , vol.7 , pp. 549-590
    • Reichenbach, H.1
  • 30
    • 52649114611 scopus 로고
    • The use of lead citrate at high pH as an electron opaque stain in electron microscopy
    • Reynolds, E. S. (1963). The use of lead citrate at high pH as an electron opaque stain in electron microscopy. J Cell Biol 17, 208-212.
    • (1963) J Cell Biol , vol.17 , pp. 208-212
    • Reynolds, E.S.1
  • 31
    • 34347152328 scopus 로고
    • The chemical and histochemical properties of alcian blue. I. The mechanisms of alcian blue staining
    • Scott, J. E., Quintaretti, G. & Dellovo, M. C. (1964). The chemical and histochemical properties of alcian blue. I. The mechanisms of alcian blue staining. Histochemie 4, 73-85.
    • (1964) Histochemie , vol.4 , pp. 73-85
    • Scott, J.E.1    Quintaretti, G.2    Dellovo, M.C.3
  • 33
    • 27144525864 scopus 로고    scopus 로고
    • Detection and phylogenetic relationships of highly diverse uncultured acidobacterial communities in Altamira Cave using 23S rRNA sequence analysis
    • Zimmermann, J., Gonzalez, J. M., Saiz-Jimenez, C. & Ludwig, W. (2005). Detection and phylogenetic relationships of highly diverse uncultured acidobacterial communities in Altamira Cave using 23S rRNA sequence analysis. Geomicrobiol J 22, 379-388.
    • (2005) Geomicrobiol J , vol.22 , pp. 379-388
    • Zimmermann, J.1    Gonzalez, J.M.2    Saiz-Jimenez, C.3    Ludwig, W.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.