-
1
-
-
0002451984
-
Scope: A probabilistic model for scoring tandem mass spectra against a peptide database
-
V. Bafna and N. Edwards. Scope: A probabilistic model for scoring tandem mass spectra against a peptide database. Bioinformatics, 17(Suppl. 1):S13-S21, 2001.
-
(2001)
Bioinformatics
, vol.17
, pp. S13-S21
-
-
Bafna, V.1
Edwards, N.2
-
2
-
-
0033881719
-
A dynamic programming approach to de novo peptide sequencing via tandem mass spectrometry
-
T. Chen, M. Kao, M. Tepel, J. Rush, and G. Church. A dynamic programming approach to de novo peptide sequencing via tandem mass spectrometry. In ACMSIAM Symposium on Discrete Algorithms, 2000.
-
(2000)
ACMSIAM Symposium on Discrete Algorithms
-
-
Chen, T.1
Kao, M.2
Tepel, M.3
Rush, J.4
Church, G.5
-
3
-
-
84957007393
-
-
Submitted to Discrete Applied Mathematics special issue on Combinatorics of Searching, Sorting, and Coding
-
M. Cieliebak, T. Erlebach, S. Lipták, J. Stoye, and E. Welzl. Algorithmic complexity of protein identification: Combinatorics of weighted strings. Submitted to Discrete Applied Mathematics special issue on Combinatorics of Searching, Sorting, and Coding., 2002.
-
(2002)
Algorithmic Complexity of Protein Identification: Combinatorics of Weighted Strings
-
-
Cieliebak, M.1
Erlebach, T.2
LiptÁk, S.3
Stoye, J.4
Welzl, E.5
-
4
-
-
0030331385
-
The identification of electrophoretically separated proteins by peptide mass fingerprinting
-
J. Cottrell and C. Sutton. The identification of electrophoretically separated proteins by peptide mass fingerprinting. Methods in Molecular Biology, 61:67-82, 1996.
-
(1996)
Methods in Molecular Biology
, vol.61
, pp. 67-82
-
-
Cottrell, J.1
Sutton, C.2
-
5
-
-
0032750293
-
De novo peptide sequencing via tandem mass spectrometry
-
V. Dancik, T. Addona, K. Clauser, J. Vath, and P. Pevzner. De novo peptide sequencing via tandem mass spectrometry. Journal of Computational Biology, 6:327-342, 1999.
-
(1999)
Journal of Computational Biology
, vol.6
, pp. 327-342
-
-
Dancik, V.1
Addona, T.2
Clauser, K.3
Vath, J.4
Pevzner, P.5
-
6
-
-
0000857494
-
An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
-
J. Eng, A. McCormack, and J. Yates. An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database. Journal of American Society of Mass Spectrometry, 5:976-989, 1994.
-
(1994)
Journal of American Society of Mass Spectrometry
, vol.5
, pp. 976-989
-
-
Eng, J.1
McCormack, A.2
Yates, J.3
-
8
-
-
0028060306
-
Protein identification in dna databases by peptide mass fingerprinting
-
P. James, M. Quadroni, E. Carafoli, and G. Gonnet. Protein identification in dna databases by peptide mass fingerprinting. Protein Science, 3(8):1347-1350, 1994.
-
(1994)
Protein Science
, vol.3
, Issue.8
, pp. 1347-1350
-
-
James, P.1
Quadroni, M.2
Carafoli, E.3
Gonnet, G.4
-
9
-
-
0033227559
-
Reducing the space requirement of suffix trees
-
S. Kurtz. Reducing the space requirement of suffix trees. Software-Practice and Experience, 29(13):1149-1171, 1999.
-
(1999)
Software-Practice and Experience
, vol.29
, Issue.13
, pp. 1149-1171
-
-
Kurtz, S.1
-
10
-
-
0030641445
-
Peptide mass fingerprinting using maldi-tof mass spectrometry
-
D. Pappin. Peptide mass fingerprinting using maldi-tof mass spectrometry. Methods in Molecular Biology, 64:165-173, 1997.
-
(1997)
Methods in Molecular Biology
, vol.64
, pp. 165-173
-
-
Pappin, D.1
-
11
-
-
12944269065
-
Rapid identification of proteins by peptidemass fingerprinting
-
D. Pappin, P. Hojrup, and A. Bleasby. Rapid identification of proteins by peptidemass fingerprinting. Currents in Biology, 3(6):327-332, 1993.
-
(1993)
Currents in Biology
, vol.3
, Issue.6
, pp. 327-332
-
-
Pappin, D.1
Hojrup, P.2
Bleasby, A.3
-
12
-
-
0033434080
-
Probability-based protein identification by searching sequence databases using mass spectrometry data
-
D. Perkins, D. Pappin, D. Creasy, and J. Cottrell. Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis, 20(18):3551-3567, 1997.
-
(1997)
Electrophoresis
, vol.20
, Issue.18
, pp. 3551-3567
-
-
Perkins, D.1
Pappin, D.2
Creasy, D.3
Cottrell, J.4
-
13
-
-
0033723520
-
Mutation-tolerant protein identification by mass-spectrometry
-
R. Shamir, S. Miyano, S. Istrail, P. Pevzner, and M. Waterman, editors, ACM Press
-
P. Pevzner, V. Dancik, and C. Tang. Mutation-tolerant protein identification by mass-spectrometry. In R. Shamir, S. Miyano, S. Istrail, P. Pevzner, and M. Waterman, editors, International Conference on Computational Molecular Biology (RECOMB), pages 231-236. ACM Press, 2000.
-
(2000)
International Conference on Computational Molecular Biology (RECOMB)
, pp. 231-236
-
-
Pevzner, P.1
Dancik, V.2
Tang, C.3
-
14
-
-
0030959279
-
Sequence database searches via de novo peptide sequencing by mass spectrometry
-
J. Taylor and R. Johnson. Sequence database searches via de novo peptide sequencing by mass spectrometry. Rapid Communications in Mass Spectrometry, 11:1067-1075, 1997.
-
(1997)
Rapid Communications in Mass Spectrometry
, vol.11
, pp. 1067-1075
-
-
Taylor, J.1
Johnson, R.2
|