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Volumn 8, Issue 6, 2010, Pages 981-994

Adepts: Advanced peptide de novo sequencing with a pair of tandem mass spectra

Author keywords

CID; ETD; Peptide de novo sequencing; tandem mass spectrometry

Indexed keywords

PEPTIDE;

EID: 78649813107     PISSN: 02197200     EISSN: None     Source Type: Journal    
DOI: 10.1142/S0219720010005099     Document Type: Article
Times cited : (29)

References (16)
  • 2
    • 47249138163 scopus 로고    scopus 로고
    • Spectrum fusion: Using multiple mass spectra for de novo peptide sequencing
    • Datta R, Bern MW, Spectrum fusion: Using multiple mass spectra for de novo peptide sequencing, RECOMB, 140-153, 2008.
    • (2008) RECOMB , pp. 140-153
    • Datta, R.1    Bern, M.W.2
  • 5
    • 13844319908 scopus 로고    scopus 로고
    • PepNovo: De novo peptide sequencing via probabilistic network modelling
    • Frank A, Pevzner PA, PepNovo: de novo peptide sequencing via probabilistic network modelling, Anal Chem 4:964-973, 2005.
    • (2005) Anal Chem , vol.4 , pp. 964-973
    • Frank, A.1    Pevzner, P.A.2
  • 8
    • 7644230941 scopus 로고    scopus 로고
    • De novo peptide sequencing based on a divide-and-conquer algorithm and peptide tandem spectrum simulation
    • Zhang Z, De novo peptide sequencing based on a divide-and-conquer algorithm and peptide tandem spectrum simulation, Anal Chem 76(21):6374-6383, 2004.
    • (2004) Anal Chem , vol.76 , Issue.21 , pp. 6374-6383
    • Zhang, Z.1
  • 9
    • 75749131938 scopus 로고    scopus 로고
    • Challenges in computational analysis of mass spectrometry data for proteomics
    • Ma B, Challenges in computational analysis of mass spectrometry data for proteomics, J Comput Sci Technol 25(1):107-123, 2009.
    • (2009) J Comput Sci Technol , vol.25 , Issue.1 , pp. 107-123
    • Ma, B.1
  • 10
    • 0035356977 scopus 로고    scopus 로고
    • Implementation and uses of automated de novo peptide sequencing by tandem mass spectrometry
    • Taylor JA, Johnson RS, Implementation and uses of automated de novo peptide sequencing by tandem mass spectrometry, Anal Chem 73(11):2594-2604, 2001.
    • (2001) Anal Chem , vol.73 , Issue.11 , pp. 2594-2604
    • Taylor, J.A.1    Johnson, R.S.2
  • 11
    • 0037223678 scopus 로고    scopus 로고
    • A suboptimal algorithm for de novo peptide sequencing via tandem mass spectrometry
    • Lu B, Chen T, A suboptimal algorithm for de novo peptide sequencing via tandem mass spectrometry, J Comput Biol 1:1-12, 2003.
    • (2003) J Comput Biol , vol.1 , pp. 1-12
    • Lu, B.1    Chen, T.2
  • 12
    • 76549097437 scopus 로고    scopus 로고
    • Better score function for peptide identification with ETD MS/MS spectra
    • Liu X, Shan B, Xin L, Ma B, Better score function for peptide identification with ETD MS/MS spectra, BMC Bioinformatics 11(Suppl 1):S4, 2010.
    • (2010) BMC Bioinformatics , vol.11 , Issue.SUPPL. 1
    • Liu, X.1    Shan, B.2    Xin, L.3    Ma, B.4
  • 14
    • 33751068791 scopus 로고    scopus 로고
    • Performance evaluation of existing de novo sequencing algorithms
    • Pevtsov S, Fedulova I, Mirzaei H, Buck C, Zhang X, Performance evaluation of existing de novo sequencing algorithms, J Proteome Res 1764-1765(11):3018- 3028, 2006.
    • (2006) J Proteome Res , vol.1764-1765 , Issue.11 , pp. 3018-3028
    • Pevtsov, S.1    Fedulova, I.2    Mirzaei, H.3    Buck, C.4    Zhang, X.5
  • 16
    • 32444446805 scopus 로고    scopus 로고
    • XCMS: Processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification
    • Smith CA, Want EJ, O'Maille G, Abagyan R, Siuzdak G, XCMS: Processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification, Anal Chem 78(3):779-787, 2006.
    • (2006) Anal Chem , vol.78 , Issue.3 , pp. 779-787
    • Smith, C.A.1    Want, E.J.2    O'Maille, G.3    Abagyan, R.4    Siuzdak, G.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.