-
1
-
-
47149111640
-
TileQC: a system for tile-based quality control of Solexa data
-
10.1186/1471-2105-9-250, 2443380, 18507856
-
Dolan PC, Denver DR. TileQC: a system for tile-based quality control of Solexa data. BMC Bioinformatics 2008, 9:250. 10.1186/1471-2105-9-250, 2443380, 18507856.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 250
-
-
Dolan, P.C.1
Denver, D.R.2
-
2
-
-
69849115727
-
PIQA: pipeline for Illumina G1 genome analyzer data quality assessment
-
10.1093/bioinformatics/btp429, 2735671, 19602525
-
Martinez-Alcantara A, Ballesteros E, Feng C, Rojas M, Koshinsky H, Fofanov VY, Havlak P, Fofanov Y. PIQA: pipeline for Illumina G1 genome analyzer data quality assessment. Bioinformatics 2009, 25:2438-2439. 10.1093/bioinformatics/btp429, 2735671, 19602525.
-
(2009)
Bioinformatics
, vol.25
, pp. 2438-2439
-
-
Martinez-Alcantara, A.1
Ballesteros, E.2
Feng, C.3
Rojas, M.4
Koshinsky, H.5
Fofanov, V.Y.6
Havlak, P.7
Fofanov, Y.8
-
3
-
-
29144535372
-
Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data
-
10.1093/nar/gni179, 1283542, 16284200
-
Dai M, Wang P, Boyd AD, Kostov G, Athey B, Jones EG, Bunney WE, Myers RM, Speed TP, Akil H, et al. Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data. Nucleic Acids Res 2005, 33:e175. 10.1093/nar/gni179, 1283542, 16284200.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Dai, M.1
Wang, P.2
Boyd, A.D.3
Kostov, G.4
Athey, B.5
Jones, E.G.6
Bunney, W.E.7
Myers, R.M.8
Speed, T.P.9
Akil, H.10
-
4
-
-
1342330572
-
A benchmark for Affymetrix GeneChip expression measures
-
10.1093/bioinformatics/btg410, 14960458
-
Cope LM, Irizarry RA, Jaffee HA, Wu Z, Speed TP. A benchmark for Affymetrix GeneChip expression measures. Bioinformatics 2004, 20:323-331. 10.1093/bioinformatics/btg410, 14960458.
-
(2004)
Bioinformatics
, vol.20
, pp. 323-331
-
-
Cope, L.M.1
Irizarry, R.A.2
Jaffee, H.A.3
Wu, Z.4
Speed, T.P.5
-
5
-
-
12344280017
-
Summaries of Affymetrix GeneChip probe level data
-
10.1093/nar/gng015, 150247, 12582260
-
Irizarry RA, Bolstad BM, Collin F, Cope LM, Hobbs B, Speed TP. Summaries of Affymetrix GeneChip probe level data. Nucleic Acids Res 2003, 31:e15. 10.1093/nar/gng015, 150247, 12582260.
-
(2003)
Nucleic Acids Res
, vol.31
-
-
Irizarry, R.A.1
Bolstad, B.M.2
Collin, F.3
Cope, L.M.4
Hobbs, B.5
Speed, T.P.6
-
6
-
-
77951223434
-
Identification and correction of previously unreported spatial phenomena using raw Illumina BeadArray data
-
10.1186/1471-2105-11-208, 2880029, 20423502
-
Smith ML, Dunning MJ, Tavare S, Lynch AG. Identification and correction of previously unreported spatial phenomena using raw Illumina BeadArray data. BMC Bioinformatics 2010, 11:208. 10.1186/1471-2105-11-208, 2880029, 20423502.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 208
-
-
Smith, M.L.1
Dunning, M.J.2
Tavare, S.3
Lynch, A.G.4
-
7
-
-
57249114507
-
BASH: a tool for managing BeadArray spatial artefacts
-
10.1093/bioinformatics/btn557, 2639304, 18953044
-
Cairns JM, Dunning MJ, Ritchie ME, Russell R, Lynch AG. BASH: a tool for managing BeadArray spatial artefacts. Bioinformatics 2008, 24:2921-2922. 10.1093/bioinformatics/btn557, 2639304, 18953044.
-
(2008)
Bioinformatics
, vol.24
, pp. 2921-2922
-
-
Cairns, J.M.1
Dunning, M.J.2
Ritchie, M.E.3
Russell, R.4
Lynch, A.G.5
-
8
-
-
34548561818
-
Beadarray: R classes and methods for Illumina bead-based data
-
10.1093/bioinformatics/btm311, 17586828
-
Dunning MJ, Smith ML, Ritchie ME, Tavare S. beadarray: R classes and methods for Illumina bead-based data. Bioinformatics 2007, 23:2183-2184. 10.1093/bioinformatics/btm311, 17586828.
-
(2007)
Bioinformatics
, vol.23
, pp. 2183-2184
-
-
Dunning, M.J.1
Smith, M.L.2
Ritchie, M.E.3
Tavare, S.4
-
9
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
10.1186/gb-2009-10-3-r25, 2690996, 19261174
-
Langmead B, Trapnell C, Pop M, Salzberg SL. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol 2009, 10:R25. 10.1186/gb-2009-10-3-r25, 2690996, 19261174.
-
(2009)
Genome Biol
, vol.10
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
11
-
-
58049218775
-
1000 Genomes Project promises closer look at variation in human genome
-
10.1001/jama.2008.823, 19088343
-
Kuehn BM. 1000 Genomes Project promises closer look at variation in human genome. JAMA 2008, 300:2715. 10.1001/jama.2008.823, 19088343.
-
(2008)
JAMA
, vol.300
, pp. 2715
-
-
Kuehn, B.M.1
-
12
-
-
40049104784
-
Consortium hopes to sequence genome of 1000 volunteers
-
10.1136/bmj.39472.676481.DB, 18244979
-
Wise J. Consortium hopes to sequence genome of 1000 volunteers. BMJ 2008, 336:237. 10.1136/bmj.39472.676481.DB, 18244979.
-
(2008)
BMJ
, vol.336
, pp. 237
-
-
Wise, J.1
|