The polymorphism of protein phosphatase Z1 gene in Candida albicans

Journal of Basic Microbiology

Volumn 50, Issue SUPPL. 1, 2010, Pages

  Kovács, László ^a   Farkas, Ilona ^a   Majoros, László ^a   Miskei, Márton ^b   Pócsi, István ^c   Dombrádi, Viktor ^a  

^a UNIVERSITY OF DEBRECEN   (Hungary)

^b UNIVERSITY OF DEBRECEN   (Hungary)

^c UNIVERSITY OF DEBRECEN   (Hungary)

Author keywords

Candida albicans; DNA sequencing; Genetic flexibility; Genotyping; RFLP

Indexed keywords

FUNGAL DNA; FUNGAL PROTEIN; PHOSPHOPROTEIN PHOSPHATASE;

ADULT; AGED; ALLELE; ARTICLE; CANDIDA ALBICANS; CHILD; DNA SEQUENCE; ENZYMOLOGY; FEMALE; FUNGAL GENE; GENETIC POLYMORPHISM; GENETIC VARIABILITY; GENETICS; GENOTYPE; HAPLOTYPE; HUMAN; INDEL MUTATION; MALE; MIDDLE AGED; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PRESCHOOL CHILD;

ADULT; AGED; AGED, 80 AND OVER; ALLELES; BASE SEQUENCE; CANDIDA ALBICANS; CHILD; CHILD, PRESCHOOL; DNA, FUNGAL; FEMALE; FUNGAL PROTEINS; GENES, FUNGAL; GENETIC VARIATION; GENOTYPE; HAPLOTYPES; HUMANS; INDEL MUTATION; MALE; MIDDLE AGED; MOLECULAR SEQUENCE DATA; PHOSPHOPROTEIN PHOSPHATASES; POLYMORPHISM, GENETIC; SEQUENCE ANALYSIS, DNA;

CANDIDA ALBICANS; FUNGI;

EID: 78649678975     PISSN: 0233111X     EISSN: 15214028     Source Type: Journal    
DOI: 10.1002/jobm.200900434     Document Type: Article

References (32)

1. Noble, S.M. and Johnson, A.D., 2007. Genetics of Candida albicans, a diploid human fungal pathogen. Annu. Rev. Genet., 41, 193-211.
2. Pujol, C., Joly, S., Lockhart, S.R., Noel, S. et al., 1997. Parity among the randomly amplified polymorphic DNA method, multilocus enzyme electrophoresis, and Southern blot hybridization with the moderately repetitive DNA probe Ca3 for fingerprinting Candida albicans. J. Clin. Microbiol., 35, 2348-2358.
3. Soll, D.R. and Pujol C., 2003. Candida albicans clades. FEMS Immun. Med. Microbiol., 39 1-7.
4. Odds, F.C., Bougnoux, M.E., Shaw, D.J., Bain, J.M. et al., 2007. Molecular phylogenetics of Candida albicans. Eukaryotic Cell, 6, 1041-1052.
5. MacCallum, D.M., Castillo, L., Nather, K., Munro, C.A. et al., 2009. Property differences among the four major Candida albicans strain clades. Eukaryotic Cell, 8, 373-387.
6. Jones, T., Federspiel, N.A., Chibana, H., Dungan, J. et al., 2004. The diploid genome sequence of Candida albicans. Proc. Natl. Acad. Sci. USA, 19, 7329-7334.
7. Arino, J., 2002. Novel protein phosphatases in yeast. Eur. J. Biochem., 269, 1072-1077.
8. Posas, F., Casamayor, A., Morral, N. and Ariño, J., 1992. Molecular cloning and analysis of a yeast protein phosphatase with an unusual amino-terminal region. J. Biol. Chem., 267, 11734-11740.
9. Posas, F., Casamayor, A. and Ariño, J., 1993. The PPZ protein phosphatases are involved in the maintenance of osmotic stability of yeast cells. FEBS Lett., 318, 282-286.
10. Lee, K.S., Hines, L.K. and Levin, D.E., 1993. A pair of functionally redundant yeast genes (PPZ1 and PPZ2) encoding type 1-related protein phosphatases function within the PKC1-mediated pathway. Mol. Cell. Biol., 13, 5843-5853.
11. Xu, D., Jiang, B., Ketela, T., Lemieux, S. et al., 2007. Genome-Wide Fitness Test and Mechanism-of-Action Studies of Inhibitory Compounds in Candida albicans. PLoS Pathog., 3, e92.
12. Hanaoka, N., Takano, Y., Shibuya, K., Fugo, H. et al., 2008. Identification of the putative protein phosphatase gene PTC1 as a virulence-related gene using a silkworm model of Candida albicans infection. Eukaryotic Cell, 7, 1640-1648.
13. Fekete, A., Pócsi, I., Emri, T., Gyetvai, A. et al., 2008. Physiological and morphological characterization of tert-butylhydroperoxide tolerant Candida albicans mutants. J. Basic Microbiol., 48, 480-4877.
14. Szabó, Z., Tóth, B., Kovács, M., Kardos, G., Maráz, A., Rozgonyi, F. and Majoros, L., 2008. Evaluation of the new Micronaut-Candida system compared to the API ID32C method for yeast identification. J. Clin. Microbiol., 46, 1824-1825.
15. Lee, S.B., Milgroom, M.G. and Taylor, J.W., 1988. A rapid, high yield mini-prep method for isolation of total genomic DNA from fungi. Fungal Genet. Newsl., 35, 23.
16. Dosztányi, Zs., Csizmók, V., Tompa, P. and Simon, I., 2005. IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content. Bioinformatics, 21, 3433-3434.
17. Kumar, S., Dudley, J., Nei, M. and Tamura, K., 2008. MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences. Brief. Bioinformatics, 9, 299-306.
18. Sealey, P.G. and Southern, E.M., 1990. Gel electrophoresis of DNA. In: Rickwood, D., Hames, B.D. (eds.), Gel Electrophoresis of Nucleic Acids - A Practical Approach. IRL Press, Oxford, New York, Tokyo, pp. 51-99.
19. Bougnoux, M.E., Morand, S. and d'Enfert, C., 2002. Usefulness of multilocus sequence typing for characterization of clinical isolates of Candida albicans. J. Clin. Microbiol, 40, 1290-1297.
20. Bougnoux, M.E., Tavanti, A., Bouchier, C., Gow, N.A.R. et al., 2003. Collaborative consensus for optimized multilocus sequence typing of Candida albicans. J. Clin. Microbiol., 41, 5265-5266.
21. Goldberg, J., Huang, H., Kwon, Y., Greengard, P., Nairn, A.C. et al., 1995. Three-dimensional structure of the catalytic subunit of protein serine/threonine phosphatase-1. Nature, 376, 745-753.
22. Larriba G. and Calderone, R.A., 2008. Hetetozygozity and loss of heterozygosity in Candida albicans. In: San-Blas, G., Calderon, R.A. (eds.), Pathogenic Fungi - Insights in Molecular Biology. Caister Academic Press, Wymondham, UK, pp. 43-76.
23. Odds, F.C. and Jacobsen, M.D., 2008. Multilocus sequence typing of pathogenic Candida species. Eukaryotic Cell, 7, 1075-1084.
24. Odds, F.C., Davidson, A.D., Jacobsen, M.D., Tavanti, A. et al., 2006. Candida albicans strain maintenance, replacement, and microvariation demonstrated by multilocus sequence typing. J. Clin. Microbiol., 44, 3647-3658.
25. Jacobsen, M.D., Duncan, A.D., Bain, J., Johnson, E.M. et al., 2008. Mixed Candida albicans strain populations in colonized and infected mucosal tissues. FEMS Yeast Res., 8, 1334-1338.
26. Daniel, H.M., Sorrell, T.C. and Meyer, W., 2001. Partial sequence analysis of the actin gene and its potential for studying the phylogeny of Candida species and their teleomorphs. Int. J. Syst. Evol. Microbiol., 51, 1593-1606.
27. Suzuki, M. and Nakase, T., 2002. A phylogenic study of ubiquinone-7 species of the genus Candida based on 18S ribosomal DNA sequence divergence. J. Gen. Appl. Microbiol., 48, 55-65.
28. Tsui, C.K., Daniel, H.M., Robert, V. and Meyer, W., 2008. Re-examining the phylogeny of clinically relevant Candida species and allied genera based on multigene analyses. FEMS Yeast Res., 8, 651-659.
29. Zhao, X., Pujol, C., Soll, D.R. and Hoyer, L.L., 2003. Allelic variation in the contiguous loci encoding Candida albicans ALS5, ALS1 and ALS9. Microbiology, 149, 2947-2960.
30. Zhao, X., Oh, S.H., Jajkos, R., Diekema, D.J. et al., 2007. Analysis of ALS5 and ALS6 allelic variability in a geographically diverse collection of Candida albicans isolates. Fungal Genet. Biol., 44, 1298-1309.
31. Holmes, A.R., Tsao, S., Ong, S.W., Lamping, E. et al., 2006. Heterozygosity and functional allelic variation in the Candida albicans efflux pump genes CDR1 and CDR2. Mol. Microbiol., 62, 170-186.
32. Haque, A., Rai, V., Bahal, B.S., Shukla, S. et al., 2006. Allelic variants of ABC drug transporter Cdr 1p in clinical isolates of Candida albicans. Biochem. Biophys. Res. Comm., 352, 491-497.