메뉴 건너뛰기




Volumn 10, Issue 1, 2010, Pages

A novel web-based TinT application and the chronology of the Primate Alu retroposon activity

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; CHRONOLOGY; COEVOLUTION; COMPARATIVE STUDY; EVOLUTIONARY BIOLOGY; GENETIC MARKER; GENOME; MOLECULAR ANALYSIS; PHYLOGENY; PRIMATE; SUCCESSION;

EID: 78649623426     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-10-376     Document Type: Article
Times cited : (44)

References (26)
  • 3
    • 37549035420 scopus 로고    scopus 로고
    • Waves of genomic hitchhikers shed light on the evolution of gamebirds (Aves: Galliformes)
    • 10.1186/1471-2148-7-190. 17925025
    • Waves of genomic hitchhikers shed light on the evolution of gamebirds (Aves: Galliformes). JO Kriegs A Matzke G Churakov A Kuritzin G Mayr J Brosius J Schmitz, BMC Evol Biol 2007 7 190 10.1186/1471-2148-7-190 17925025
    • (2007) BMC Evol Biol , vol.7 , pp. 190
    • Kriegs, J.O.1    Matzke, A.2    Churakov, G.3    Kuritzin, A.4    Mayr, G.5    Brosius, J.6    Schmitz, J.7
  • 4
    • 28844473478 scopus 로고    scopus 로고
    • Short retroposons in eukaryotic genomes
    • 10.1016/S0074-7696(05)47004-7. 16344113
    • Short retroposons in eukaryotic genomes. DA Kramerov NS Vassetzky, Int Rev Cytol 2005 247 165 221 10.1016/S0074-7696(05)47004-7 16344113
    • (2005) Int Rev Cytol , vol.247 , pp. 165-221
    • Kramerov, D.A.1    Vassetzky, N.S.2
  • 5
    • 0031894399 scopus 로고    scopus 로고
    • Mammalian retroposons integrate at kinkable DNA sites
    • 9514248
    • Mammalian retroposons integrate at kinkable DNA sites. J Jurka P Klonowski EN Trifonov, J Biomol Struct Dyn 1998 15 4 717 721 9514248
    • (1998) J Biomol Struct Dyn , vol.15 , Issue.4 , pp. 717-721
    • Jurka, J.1    Klonowski, P.2    Trifonov, E.N.3
  • 6
    • 0026749958 scopus 로고
    • Origin of the Alu family: A family of Alu-like monomers gave birth to the left and the right arms of the Alu elements
    • 10.1093/nar/20.13.3397. 1378589
    • Origin of the Alu family: a family of Alu-like monomers gave birth to the left and the right arms of the Alu elements. Y Quentin, Nucleic Acids Res 1992 20 13 3397 3401 10.1093/nar/20.13.3397 1378589
    • (1992) Nucleic Acids Res , vol.20 , Issue.13 , pp. 3397-3401
    • Quentin, Y.1
  • 7
    • 34547609849 scopus 로고    scopus 로고
    • Evolutionary history of mammalian transposons determined by genome-wide defragmentation
    • 10.1371/journal.pcbi.0030137. 17630829
    • Evolutionary history of mammalian transposons determined by genome-wide defragmentation. J Giordano Y Ge Y Gelfand G Abrusan G Benson PE Warburton, PLoS Comput Biol 2007 3 7 137 10.1371/journal.pcbi.0030137 17630829
    • (2007) PLoS Comput Biol , vol.3 , Issue.7 , pp. 5137
    • Giordano, J.1    Ge, Y.2    Gelfand, Y.3    Abrusan, G.4    Benson, G.5    Warburton, P.E.6
  • 8
    • 0022534918 scopus 로고
    • Rates of DNA sequence evolution differ between taxonomic groups
    • 10.1126/science.3082006. 3082006
    • Rates of DNA sequence evolution differ between taxonomic groups. RJ Britten, Science 1986 231 4744 1393 1398 10.1126/science.3082006 3082006
    • (1986) Science , vol.231 , Issue.4744 , pp. 1393-1398
    • Britten, R.J.1
  • 11
    • 27644439849 scopus 로고    scopus 로고
    • Tracking Alu evolution in New World primates
    • 10.1186/1471-2148-5-51. 16209711
    • Tracking Alu evolution in New World primates. DA Ray MA Batzer, BMC Evol Biol 2005 5 51 10.1186/1471-2148-5-51 16209711
    • (2005) BMC Evol Biol , vol.5 , pp. 51
    • Ray, D.A.1    Batzer, M.A.2
  • 12
    • 66049147797 scopus 로고    scopus 로고
    • Comparative analysis of Alu repeats in primate genomes
    • 10.1101/gr.083972.108. 19411604
    • Comparative analysis of Alu repeats in primate genomes. GE Liu C Alkan L Jiang S Zhao EE Eichler, Genome Res 2009 19 5 876 885 10.1101/gr.083972.108 19411604
    • (2009) Genome Res , vol.19 , Issue.5 , pp. 876-885
    • Liu, G.E.1    Alkan, C.2    Jiang, L.3    Zhao, S.4    Eichler, E.E.5
  • 13
    • 0025736539 scopus 로고
    • Reconstruction and analysis of human Alu genes
    • 10.1007/BF02515383. 1706781
    • Reconstruction and analysis of human Alu genes. J Jurka A Milosavljevic, J Mol Evol 1991 32 2 105 121 10.1007/BF02515383 1706781
    • (1991) J Mol Evol , vol.32 , Issue.2 , pp. 105-121
    • Jurka, J.1    Milosavljevic, A.2
  • 14
    • 0030045979 scopus 로고    scopus 로고
    • The age of Alu subfamilies
    • 10.1007/BF00163212. 8576965
    • The age of Alu subfamilies. V Kapitonov J Jurka, J Mol Evol 1996 42 1 59 65 10.1007/BF00163212 8576965
    • (1996) J Mol Evol , vol.42 , Issue.1 , pp. 59-65
    • Kapitonov, V.1    Jurka, J.2
  • 15
    • 77955027318 scopus 로고    scopus 로고
    • Tracking marsupial evolution using archaic genomic retroposon insertions
    • 10.1371/journal.pbio.1000436. 20668664
    • Tracking marsupial evolution using archaic genomic retroposon insertions. MA Nilsson G Churakov M Sommer NV Tran A Zemann J Brosius J Schmitz, PLoS Biol 2010 8 7 1000436 10.1371/journal.pbio.1000436 20668664
    • (2010) PLoS Biol , vol.8 , Issue.7 , pp. 51000436
    • Nilsson, M.A.1    Churakov, G.2    Sommer, M.3    Tran, N.V.4    Zemann, A.5    Brosius, J.6    Schmitz, J.7
  • 16
    • 0035108258 scopus 로고    scopus 로고
    • SINE insertions in cladistic analyses and the phylogenetic affiliations of Tarsius bancanus to other primates
    • 11156996
    • SINE insertions in cladistic analyses and the phylogenetic affiliations of Tarsius bancanus to other primates. J Schmitz M Ohme H Zischler, Genetics 2001 157 2 777 784 11156996
    • (2001) Genetics , vol.157 , Issue.2 , pp. 777-784
    • Schmitz, J.1    Ohme, M.2    Zischler, H.3
  • 17
    • 9244232873 scopus 로고    scopus 로고
    • Primate phylogeny: Molecular evidence from retroposons
    • 10.1159/000080799. 15545713
    • Primate phylogeny: molecular evidence from retroposons. J Schmitz C Roos H Zischler, Cytogenet Genome Res 2005 108 1-3 26 37 10.1159/000080799 15545713
    • (2005) Cytogenet Genome Res , vol.108 , Issue.1-3 , pp. 26-37
    • Schmitz, J.1    Roos, C.2    Zischler, H.3
  • 19
    • 77950473787 scopus 로고    scopus 로고
    • Large-scale discovery of insertion hotspots and preferential integration sites of human transposed elements
    • 10.1093/nar/gkp1134. 20008508
    • Large-scale discovery of insertion hotspots and preferential integration sites of human transposed elements. A Levy S Schwartz G Ast, Nucleic Acids Res 2009 38 5 1515 1530 10.1093/nar/gkp1134 20008508
    • (2009) Nucleic Acids Res , vol.38 , Issue.5 , pp. 1515-1530
    • Levy, A.1    Schwartz, S.2    Ast, G.3
  • 20
    • 0024379002 scopus 로고
    • Newly arisen DNA repeats in primate phylogeny
    • 10.1073/pnas.86.23.9360. 2480599
    • Newly arisen DNA repeats in primate phylogeny. SC Ryan A Dugaiczyk, Proc Natl Acad Sci USA 1989 86 23 9360 9364 10.1073/pnas.86.23.9360 2480599
    • (1989) Proc Natl Acad Sci USA , vol.86 , Issue.23 , pp. 9360-9364
    • Ryan, S.C.1    Dugaiczyk, A.2
  • 21
    • 0033964296 scopus 로고    scopus 로고
    • SINE insertions: Powerful tools for molecular systematics
    • 10.1002/(SICI)1521-1878(200002)22:2<148::AID-BIES63.0.CO;2-Z. 10655034
    • SINE insertions: powerful tools for molecular systematics. AM Shedlock N Okada, Bioessays 2000 22 2 148 160 10.1002/(SICI)1521-1878(200002)22:2<148:: AID-BIES63.0.CO;2-Z 10655034
    • (2000) Bioessays , vol.22 , Issue.2 , pp. 148-160
    • Shedlock, A.M.1    Okada, N.2
  • 23
    • 0028804572 scopus 로고
    • MIRs are classic, tRNA-derived SINEs that amplified before the mammalian radiation
    • 10.1093/nar/23.1.98. 7870595
    • MIRs are classic, tRNA-derived SINEs that amplified before the mammalian radiation. AF Smit AD Riggs, Nucleic Acids Res 1995 23 1 98 102 10.1093/nar/23.1.98 7870595
    • (1995) Nucleic Acids Res , vol.23 , Issue.1 , pp. 98-102
    • Smit, A.F.1    Riggs, A.D.2
  • 25
    • 33748884192 scopus 로고    scopus 로고
    • Primate molecular divergence dates
    • 10.1016/j.ympev.2006.05.021. 16815047
    • Primate molecular divergence dates. ME Steiper NM Young, Mol Phylogenet Evol 2006 41 2 384 394 10.1016/j.ympev.2006.05.021 16815047
    • (2006) Mol Phylogenet Evol , vol.41 , Issue.2 , pp. 384-394
    • Steiper, M.E.1    Young, N.M.2
  • 26
    • 3242656981 scopus 로고    scopus 로고
    • Primate jumping genes elucidate strepsirrhine phylogeny
    • 10.1073/pnas.0403852101. 15249661
    • Primate jumping genes elucidate strepsirrhine phylogeny. C Roos J Schmitz H Zischler, Proc Natl Acad Sci USA 2004 101 29 10650 10654 10.1073/pnas. 0403852101 15249661
    • (2004) Proc Natl Acad Sci USA , vol.101 , Issue.29 , pp. 10650-10654
    • Roos, C.1    Schmitz, J.2    Zischler, H.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.