L-plotting-A method for visual analysis of physiological experimental and modeling multi-component data

Neurocomputing

Volumn 74, Issue 1-3, 2010, Pages 328-336

  Dunin Barkowski, W L ^a,b   Lovering, A T ^b,c   Orem, J M ^b   Baekey, D M ^d   Dick, T E ^d   Rybak, I A ^e   Morris, K F ^f   O'Connor, R ^f   Nuding, S C ^f   Shannon, R ^f   Lindsey, B G ^f  

^a SCIENTIFIC RESEARCH INSTITUTE FOR SYSTEM ANALYSIS   (Russian Federation)

^b TEXAS TECH UNIVERSITY HEALTH SCIENCES CENTER SCHOOL OF MEDICINE   (United States)

^c UNIVERSITY OF OREGON   (United States)

^d CASE WESTERN RESERVE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^e DREXEL UNIVERSITY   (United States)

^f UNIVERSITY OF SOUTH FLORIDA   (United States)

Author keywords

Brainstem respiratory pattern generator; Multi neuronal recordings; Multidimensional data visualization; Recurrence plotting; Verification of computational models

Indexed keywords

BRAINSTEM; COMPUTATIONAL MODEL; EXPERIMENTAL DATA; MULTI-NEURONAL RECORDINGS; MULTICOMPONENTS; MULTIDIMENSIONAL DATA; MULTIDIMENSIONAL DATA VISUALIZATION; NETWORK SIMULATION; PHASE SWITCHING; RECURRENCE PLOTTING; RESPIRATORY PATTERN; VISUAL ANALYSIS;

COMPUTER SIMULATION; RESPIRATORS; VISUALIZATION;

DATA VISUALIZATION;

ANIMAL EXPERIMENT; ARTICLE; BRAIN STEM; BREATHING PATTERN; CONTROLLED STUDY; INFORMATION PROCESSING; INTERMETHOD COMPARISON; MATHEMATICAL MODEL; NONHUMAN; PATTERN GENERATOR; PRIORITY JOURNAL; SIMULATION;

EID: 78649469093     PISSN: 09252312     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.neucom.2010.03.015     Document Type: Article

References (17)

1. Papadimitriou C.H. Computational Complexity. 1994, Addison-Wesley, New York, 399 pp.
2. Eckmann J.-P., Kamphorst S.O., Ruelle D. Recurrence plots of dynamical systems. Europhys. Lett. 1987, 5:973-977.
3. Brain A.Guz Breathing and breathlessness. Respir. Physiol. 1997, 109:197-204.
4. Orem J.M., Vidruk E.H. Activity of medullary respiratory neurons during ventilator-induced apnea in sleep and wakefulness. J. Appl. Physiol. 1998, 84:922-932.
5. W.L. Dunin-Barkowski, L-plotting-a new way of multidimensional data flow visualization, in: Dynamical Neuroscience XIV: Frontiers in Neural Signal Processing, Atlanta, GA, October 12-13, 2006.
6. W.L. Dunin-Barkowski, T.E. Dick, J.M. Orem, I.A. Rybak, K.F. Morris, R. O'Konnor, B.G. Lindsey, L-plotting of multidimensional data: applications for the respiratory pattern analysis. Program no. 154.9, Neuroscience Meeting Planner, Society for Neuroscience, Atlanta, GA, 2006.
7. Rybak I.A., O'Connor R., Ross A., Shevtsova N.A., Nuding S.C., Segers L.S., Shannon R., Dick T.E., Dunin-Barkowski W.L., Orem J.M., Solomon I.C., Morris K.F., Lindsey B.G. Reconfiguration of the pontomedullary respiratory network: a computational modeling study with coordinated in vivo experiments. J. Neurophysiol. 2008, 100:1770-1799.
8. Chetaev A.N. Neural Nets and Markov's Chains. 1985, Nauka Publishers, Moscow, 126 pp. (in Russian).
9. Dunin-Barkowski W.L., Lovering A.T., Orem J.M. A neural ensemble model of the respiratory pattern generator: properties of the minimal model. Neurocomputing 2002, 44-46:381-389.
10. Orem J.M., Lovering A.T., Dunin-Barkowski W.L., Vidruk E.H. Endogenous excitatory drive to the respiratory system in rapid eye movement sleep. J. Physiol. 2000, 527.2:365-376.
11. B.G. Lindsey, R. O'Connor, S.C. Nuding, L.S. Segers, K.F. Morris, R. Shannon, I.A. Rybak , A consolidated hybrid pontine-medullary network model: simulated predictions and experimental testing, Program no. 866.7, Abstract Viewer/Itinerary Planner, Society for Neuroscience, Washington, DC, 2005.
12. D.M. Baekey, M.A. Jaber, K.F. Morris, T.E. Dick Differential activation of expiratory activity during and after brief episodes of hypoxia in the WHBP from rats, Program No. 187.10, Abstract Viewer/Itinerary Planner, Society for Neuroscience, Washington, DC, 2004.
13. Segers L.S., Nuding S.C., Dick T.E., Shannon R., Baekey D.M., Solomon I.C., Morris K.F., Lindsey B.G. Functional connectivity in the pontomedullary respiratory network. J. Neurophysiol. 2008, 100:1749-1769.
14. Dunin-Barkowski W.L. Continuous description of a neuron impulse model. Biofizika 1967, 12:746-750. in Russian.
15. Dick T.E., Shannon R., Lindsey B.G., Nuding S.C., Segers L.S., Baekey D.M., Morris K.F. Arterial pulse modulated activity is expressed in respiratory neural output. J. Appl. Physiol. 2005, 99:691-698.
16. Kozlov A., Huss M., Lansner A., Kotaleski J.H., Grillner S. Simple cellular and network control principles govern complex patterns of motor behavior. Proc. Natl. Acad. Sci. USA 2009, 106:20027-20032.
17. Buszaki G. Rhythms of Brain. 2006, Oxford University Press, New York, 465 pp.