-
1
-
-
0033609147
-
Phylogeny of a rapidly evolving clade: The cichlid fishes of Lake Malawi, East Africa
-
Albertson RC, Markert JA, Danley PD, Kocher TD. 1999. Phylogeny of a rapidly evolving clade: the cichlid fishes of Lake Malawi, East Africa. Proc Natl Acad Sci USA. 96:5107-5110.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 5107-5110
-
-
Albertson, R.C.1
Markert, J.A.2
Danley, P.D.3
Kocher, T.D.4
-
2
-
-
0345060890
-
Divergent selection during speciation of Lake Malawi cichlid fishes inferred from parallel radiations in nuptial coloration
-
Allender CJ, Seehausen O, Knight ME, Turner GF, Maclean N. 2003. Divergent selection during speciation of Lake Malawi cichlid fishes inferred from parallel radiations in nuptial coloration. Proc Natl Acad Sci USA. 100:14074-14079.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 14074-14079
-
-
Allender, C.J.1
Seehausen, O.2
Knight, M.E.3
Turner, G.F.4
MacLean, N.5
-
3
-
-
0028289475
-
Molecular determinants of human red/green color discrimination
-
Asenjo AB, Rim J, Oprian DD. 1994. Molecular determinants of human red/green color discrimination. Neuron 12:1131-1138.
-
(1994)
Neuron
, vol.12
, pp. 1131-1138
-
-
Asenjo, A.B.1
Rim, J.2
Oprian, D.D.3
-
4
-
-
84883215720
-
-
R package, version 2.1-4. Distributed by The Comprehensive R Archive Network. Available from
-
Becker RA, Wilks AR, Brownrigg R, Minka TP. 2010. maps: Draw geographical maps. R package, version 2.1-4. Distributed by The Comprehensive R Archive Network. Available from: http://cran.r-project.org/web/packages/maps.
-
(2010)
Maps: Draw Geographical Maps
-
-
Becker, R.A.1
Wilks, A.R.2
Brownrigg, R.3
Minka, T.P.4
-
5
-
-
0030034406
-
The visual pigments of fish
-
Bowmaker JK. 1995. The visual pigments of fish. Prog Retin Eye Res. 15:1-31.
-
(1995)
Prog Retin Eye Res
, vol.15
, pp. 1-31
-
-
Bowmaker, J.K.1
-
7
-
-
0015070886
-
Repetitive and non-repetitive DNA sequences and a speculation on the origins of evolutionary novelty
-
Britten RJ, Davidson EH. 1971. Repetitive and non-repetitive DNA sequences and a speculation on the origins of evolutionary novelty. Q Rev Biol. 46:111-138.
-
(1971)
Q Rev Biol.
, vol.46
, pp. 111-138
-
-
Britten, R.J.1
Davidson, E.H.2
-
8
-
-
0028051269
-
Ultraviolet photoreception contributes to prey search behavior in two species of zooplanktivorous fishes
-
Browman HI, Novales-Flamarique I, Hawryshyn CW. 1994. Ultraviolet photoreception contributes to prey search behavior in two species of zooplanktivorous fishes. J Exp Biol. 186:187-198.
-
(1994)
J Exp Biol
, vol.186
, pp. 187-198
-
-
Browman, H.I.1
Novales-Flamarique, I.2
Hawryshyn, C.W.3
-
9
-
-
73949125564
-
Cichlid fish visual systems: Mechanisms of spectral tuning
-
Carleton KL. 2009. Cichlid fish visual systems: mechanisms of spectral tuning. Integr Zool. 4:75-86.
-
(2009)
Integr Zool
, vol.4
, pp. 75-86
-
-
Carleton, K.L.1
-
10
-
-
0342470959
-
Visual pigments of African cichlid fishes: Evidence for ultraviolet vision from microspectro-photometry and DNA sequences
-
Carleton KL, Harosi FI, Kocher TD. 2000. Visual pigments of African cichlid fishes: evidence for ultraviolet vision from microspectro-photometry and DNA sequences. Vision Res. 40:879-890.
-
(2000)
Vision Res
, vol.40
, pp. 879-890
-
-
Carleton, K.L.1
Harosi, F.I.2
Kocher, T.D.3
-
11
-
-
77951987816
-
Genetic basis of differential opsin gene expression in cichlid fishes
-
Carleton KL, Hofmann CM, Klisz C, Patel Z, Chircus LM, Simenauer LH, Soodoo N, Albertson RC, Ser JR. 2010. Genetic basis of differential opsin gene expression in cichlid fishes. J Evol Biol. 23:840-853.
-
(2010)
J Evol Biol.
, vol.23
, pp. 840-853
-
-
Carleton, K.L.1
Hofmann, C.M.2
Klisz, C.3
Patel, Z.4
Chircus, L.M.5
Simenauer, L.H.6
Soodoo, N.7
Albertson, R.C.8
Ser, J.R.9
-
12
-
-
0034898019
-
Cone opsin genes of African cichlid fishes: Tuning spectral sensitivity by differential gene expression
-
Carleton KL, Kocher TD. 2001. Cone opsin genes of African cichlid fishes: tuning spectral sensitivity by differential gene expression. Mol Biol Evol. 18:1540-1550.
-
(2001)
Mol Biol Evol
, vol.18
, pp. 1540-1550
-
-
Carleton, K.L.1
Kocher, T.D.2
-
13
-
-
26244455990
-
Colour vision and speciation in Lake Victoria cichlids of the genus Pundamilia
-
Carleton KL, Parry JW, Bowmaker JK, Hunt DM, Seehausen O. 2005. Colour vision and speciation in Lake Victoria cichlids of the genus Pundamilia. Mol Ecol. 14:4341-4353.
-
(2005)
Mol Ecol
, vol.14
, pp. 4341-4353
-
-
Carleton, K.L.1
Parry, J.W.2
Bowmaker, J.K.3
Hunt, D.M.4
Seehausen, O.5
-
14
-
-
33748085426
-
Visual communication in East African cichlid fishes: Diversity in a phylogenetic context
-
Ladich F, Collin SP, Moller P, Kapoor BG, editors Enfield (NH): Science Publishers
-
Carleton KL, Spady TC, Kocher TD. 2006. Visual communication in East African cichlid fishes: diversity in a phylogenetic context. In: Ladich F, Collin SP, Moller P, Kapoor BG, editors. Communication in fishes. Enfield (NH): Science Publishers. p. 485-515.
-
(2006)
Communication in Fishes
, pp. 485-515
-
-
Carleton, K.L.1
Spady, T.C.2
Kocher, T.D.3
-
15
-
-
45849085354
-
Visual sensitivities tuned by heterochronic shifts in opsin gene expression
-
Carleton KL, Spady TC, Streelman JT, Kidd MR, McFarland WN, Loew ER. 2008. Visual sensitivities tuned by heterochronic shifts in opsin gene expression. BMC Biol. 6:22.
-
(2008)
BMC Biol
, vol.6
, pp. 22
-
-
Carleton, K.L.1
Spady, T.C.2
Streelman, J.T.3
Kidd, M.R.4
McFarland, W.N.5
Loew, E.R.6
-
16
-
-
74549118236
-
Adaptive evolution of pelvic reduction in sticklebacks by recurrent deletion of a Pitx1 enhancer
-
16 co-authors
-
Chan YF, Marks ME, Jones FC, et al. (16 co-authors). 2010. Adaptive evolution of pelvic reduction in sticklebacks by recurrent deletion of a Pitx1 enhancer. Science 327:302-305.
-
(2010)
Science
, vol.327
, pp. 302-305
-
-
Chan, Y.F.1
Marks, M.E.2
Jones, F.C.3
-
18
-
-
35148857230
-
Phylogenetic relationships of the Lake Tanganyika cichlid tribe Lamprologini: The story from mitochondrial DNA
-
Day JJ, Santini S, Garcia-Moreno J. 2007. Phylogenetic relationships of the Lake Tanganyika cichlid tribe Lamprologini: the story from mitochondrial DNA. Mol Phylogenet Evol. 45:629-642.
-
(2007)
Mol Phylogenet Evol
, vol.45
, pp. 629-642
-
-
Day, J.J.1
Santini, S.2
Garcia-Moreno, J.3
-
20
-
-
31344444103
-
Visual acuity, environmental complexity, and social organization in African cichlid fishes
-
Dobberfuhl AP, Ullmann JF, Shumway CA. 2005. Visual acuity, environmental complexity, and social organization in African cichlid fishes. Behav Neurosci. 119:1648-1655.
-
(2005)
Behav Neurosci
, vol.119
, pp. 1648-1655
-
-
Dobberfuhl, A.P.1
Ullmann, J.F.2
Shumway, C.A.3
-
21
-
-
18844371528
-
Evolutionary relationships of the Limnochromini, a tribe of benthic deepwater cichlid fish endemic to Lake Tanganyika, East Africa
-
Duftner N, Koblmuller S, Sturmbauer C. 2005. Evolutionary relationships of the Limnochromini, a tribe of benthic deepwater cichlid fish endemic to Lake Tanganyika, East Africa. J Mol Evol. 60:277-289.
-
(2005)
J Mol Evol
, vol.60
, pp. 277-289
-
-
Duftner, N.1
Koblmuller, S.2
Sturmbauer, C.3
-
22
-
-
0022203256
-
Phylogenies and the comparative method
-
Felsenstein J. 1985. Phylogenies and the comparative method. Am Nat. 125:1.
-
(1985)
Am Nat
, vol.125
, pp. 1
-
-
Felsenstein, J.1
-
23
-
-
0018926256
-
Visual receptor pigments in the African cichlid fish, Haplochromis burtoni
-
Fernald RD, Liebman PA. 1980. Visual receptor pigments in the African cichlid fish, Haplochromis burtoni. Vision Res. 20:857-864.
-
(1980)
Vision Res
, vol.20
, pp. 857-864
-
-
Fernald, R.D.1
Liebman, P.A.2
-
24
-
-
77955132153
-
-
R package, version 1.2-9. Distributed by The Comprehensive R Archive Network. Available from
-
Fox J. 2008. car: Companion to applied regression. R package, version 1.2-9. Distributed by The Comprehensive R Archive Network. Available from: http://cran.r-project.org/web/packages/car.
-
(2008)
Car: Companion to Applied Regression
-
-
Fox, J.1
-
25
-
-
74049150036
-
Testing for the existence of clusters
-
Fuentes C, Casella G. 2009. Testing for the existence of clusters. Stat Oper Res Trans. 33:115-146.
-
(2009)
Stat Oper Res Trans
, vol.33
, pp. 115-146
-
-
Fuentes, C.1
Casella, G.2
-
27
-
-
67649873296
-
The causes of repeated genetic evolution
-
Gompel N, Prud'homme B. 2009. The causes of repeated genetic evolution. Dev Biol. 332:36-47.
-
(2009)
Dev Biol
, vol.332
, pp. 36-47
-
-
Gompel, N.1
Prud'Homme, B.2
-
30
-
-
21244506670
-
Diurnal rhythm of cone opsin expression in the teleost fish Haplochromis burtoni
-
Halstenberg S, Lindgren KM, Samagh SP, Nadal-Vicens M, Balt S, Fernald RD. 2005. Diurnal rhythm of cone opsin expression in the teleost fish Haplochromis burtoni. Vis Neurosci. 22:135-141.
-
(2005)
Vis Neurosci
, vol.22
, pp. 135-141
-
-
Halstenberg, S.1
Lindgren, K.M.2
Samagh, S.P.3
Nadal-Vicens, M.4
Balt, S.5
Fernald, R.D.6
-
31
-
-
77954186480
-
-
R package, version 1.3-1. Distributed by The Comprehensive R Archive Network. Available from
-
Harmon L, Weir J, Brock C, Glor R, Challenger W, Hunt G. 2009. geiger: Analysis of evolutionary diversification. R package, version 1.3-1. Distributed by The Comprehensive R Archive Network. Available from: http://cran.r-project. org/web/packages/geiger.
-
(2009)
Geiger: Analysis of Evolutionary Diversification
-
-
Harmon, L.1
Weir, J.2
Brock, C.3
Glor, R.4
Challenger, W.5
Hunt, G.6
-
32
-
-
73449113002
-
Gene duplication and differentialgene expression play an important role in the diversification ofvisual pigments in fish
-
Hofmann CM, Carleton KL. 2009. Gene duplication and differentialgene expression play an important role in the diversification ofvisual pigments in fish. Integr Comp Biol. 49:630-643.
-
(2009)
Integr Comp Biol
, vol.49
, pp. 630-643
-
-
Hofmann, C.M.1
Carleton, K.L.2
-
33
-
-
33745911143
-
A single amino acid mutation contributes to adaptivebeach mouse color pattern
-
Hoekstra HE, Hirschmann RJ, Bundey RA, Insel PA, Crossland JP.2006. A single amino acid mutation contributes to adaptivebeach mouse color pattern. Science 313:101-104.
-
(2006)
Science
, vol.313
, pp. 101-104
-
-
Hoekstra, H.E.1
Hirschmann, R.J.2
Bundey, R.A.3
Insel, P.A.4
Crossland, J.P.5
-
34
-
-
75349095909
-
Therelationship between lens transmission and opsin geneexpression in cichlids from Lake Malawi
-
Hofmann CM, O'Quin KE, Marshall NJ, Carleton KL. 2010. Therelationship between lens transmission and opsin geneexpression in cichlids from Lake Malawi. Vision Res. 50:357-363.
-
(2010)
Vision Res.
, vol.50
, pp. 357-363
-
-
Hofmann, C.M.1
O'Quin, K.E.2
Marshall, N.J.3
Carleton, K.L.4
-
35
-
-
73949118416
-
The eyes have it: Regulatory and structuralchanges both underlie cichlid visual pigment diversity
-
Hofmann CM, O'Quin KE, Marshall NJ, Cronin TW, Seehausen O,Carleton KL. 2009. The eyes have it: regulatory and structuralchanges both underlie cichlid visual pigment diversity. PLoS Biol.7:e1000266.
-
(2009)
PLoS Biol.
, vol.7
-
-
Hofmann, C.M.1
O'Quin, K.E.2
Marshall, N.J.3
Cronin, T.W.4
Seehausen, O.5
Carleton, K.L.6
-
36
-
-
77952001025
-
Plasticity ofopsin gene expression in cichlids from Lake Malawi
-
Hofmann CM, O'Quin KE, Smith AR, Carleton KL. 2010. Plasticity ofopsin gene expression in cichlids from Lake Malawi. Mol Ecol.19:2064-2074.
-
(2010)
Mol Ecol.
, vol.19
, pp. 2064-2074
-
-
Hofmann, C.M.1
O'Quin, K.E.2
Smith, A.R.3
Carleton, K.L.4
-
37
-
-
0030625148
-
Microhabitatuse, trophic patterns, and the evolution of brain structure inAfrican cichlids
-
Huber R, van Staaden MJ, Kaufman LS, Liem KF. 1997. Microhabitatuse, trophic patterns, and the evolution of brain structure inAfrican cichlids. Brain Behav Evol. 50:167-182.
-
(1997)
Brain Behav Evol
, vol.50
, pp. 167-182
-
-
Huber, R.1
Van Staaden, M.J.2
Kaufman, L.S.3
Liem, K.F.4
-
38
-
-
0034849408
-
MRBAYES. Bayesian inference ofphylogenetic trees
-
Huelsenbeck JP, Ronquist F. 2001. MRBAYES. Bayesian inference ofphylogenetic trees. Bioinformatics 17:754-755.
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
39
-
-
0026095651
-
Adaptation of bird hemoglobins to high altitudes: Demonstration of molecular mechanism by protein engineering
-
Jessen TH, Weber RE, Fermi G, Tame J, Braunitzer G. 1991.Adaptation of bird hemoglobins to high altitudes: demonstration of molecular mechanism by protein engineering. Proc NatlAcad Sci USA. 88:6519-6522.
-
(1991)
Proc NatlAcad Sci USA
, vol.88
, pp. 6519-6522
-
-
Jessen, T.H.1
Weber, R.E.2
Fermi, G.3
Tame, J.4
Braunitzer, G.5
-
40
-
-
9644267013
-
Ultravioletradiation enhances zooplanktivory rate in ultraviolet sensitivecichlids
-
Jordan R, Howe D, Juanes F, Stauffer JJ, Loew E. 2004. Ultravioletradiation enhances zooplanktivory rate in ultraviolet sensitivecichlids. Afr J Ecol. 42:228-231.
-
(2004)
Afr J Ecol
, vol.42
, pp. 228-231
-
-
Jordan, R.1
Howe, D.2
Juanes, F.3
Stauffer, J.J.4
Loew, E.5
-
41
-
-
33645862877
-
Photopigment spectral absorbance of Lake Malawi cichlids
-
Jordan R, Kellogg K, Howe D, Juanes F, Stauffer J Jr., Loew E. 2006.Photopigment spectral absorbance of Lake Malawi cichlids. J FishBiol. 68:1291-1299.
-
(2006)
J FishBiol
, vol.68
, pp. 1291-1299
-
-
Jordan, R.1
Kellogg, K.2
Howe, D.3
Juanes, F.4
Stauffer Jr., J.5
Loew, E.6
-
42
-
-
0037703157
-
Morphometricanalysis on ecomorphologically equivalent cichlid species from Lakes Malawi and Tanganyika
-
Kassam DD, Adams DC, Hori M, Yamaoka K. 2003. Morphometricanalysis on ecomorphologically equivalent cichlid species fromLakes Malawi and Tanganyika. J Zool. 260:153-157.
-
(2003)
J Zool
, vol.260
, pp. 153-157
-
-
Kassam, D.D.1
Adams, D.C.2
Hori, M.3
Yamaoka, K.4
-
43
-
-
0037100671
-
MAFFT: A novelmethod for rapid multiple sequence alignment based on fast Fourier transform
-
Katoh K, Misawa K, Kuma K, Miyata T. 2002. MAFFT: a novelmethod for rapid multiple sequence alignment based on fastFourier transform. Nucleic Acid Res. 30:3059-3066.
-
(2002)
Nucleic Acid Res
, vol.30
, pp. 3059-3066
-
-
Katoh, K.1
Misawa, K.2
Kuma, K.3
Miyata, T.4
-
44
-
-
33645083738
-
Axes of differentiation in thebower-building cichlids of Lake Malawi
-
Kidd MR, Kidd CE, Kocher TD. 2006. Axes of differentiation in thebower-building cichlids of Lake Malawi. Mol Ecol. 15:459-478.
-
(2006)
Mol Ecol
, vol.15
, pp. 459-478
-
-
Kidd, M.R.1
Kidd, C.E.2
Kocher, T.D.3
-
45
-
-
0016669094
-
Evolution at two levels in humans andchimpanzees
-
King MC, Wilson AC. 1975. Evolution at two levels in humans andchimpanzees. Science 188:107-116.
-
(1975)
Science
, vol.188
, pp. 107-116
-
-
King, M.C.1
Wilson, A.C.2
-
47
-
-
52049112302
-
Age and spread of the haplochrominecichlid fishes in Africa
-
Koblmuller S, Schliewen UK, Duftner N, Sefc KM, Katongo C,Sturmbauer C. 2008. Age and spread of the haplochrominecichlid fishes in Africa. Mol Phylogenet Evol. 49:153-169.
-
(2008)
Mol Phylogenet Evol
, vol.49
, pp. 153-169
-
-
Koblmuller, S.1
Schliewen, U.K.2
Duftner, N.3
Sefc, K.M.4
Katongo, C.5
Sturmbauer, C.6
-
48
-
-
1842427843
-
Adaptive evolution and explosive speciation: Thecichlid fish model
-
Kocher TD. 2004. Adaptive evolution and explosive speciation: thecichlid fish model. Nat Rev Genet. 5:288-298.
-
(2004)
Nat Rev Genet
, vol.5
, pp. 288-298
-
-
Kocher, T.D.1
-
49
-
-
0027617368
-
Similarmorphologies of cichlid fish in Lakes Tanganyika and Malawi aredue to convergence
-
Kocher TD, Conroy JA, McKaye KR, Stauffer JR. 1993. Similarmorphologies of cichlid fish in Lakes Tanganyika and Malawi aredue to convergence. Mol Phylogenet Evol. 2:158-165.
-
(1993)
Mol Phylogenet Evol
, vol.2
, pp. 158-165
-
-
Kocher, T.D.1
Conroy, J.A.2
McKaye, K.R.3
Stauffer, J.R.4
-
50
-
-
0029444308
-
Evolution of NADH dehydrogenase subunit 2 in east Africancichlid fish
-
Kocher TD, Conroy JA, McKaye KR, Stauffer JR, Lockwood SF. 1995.Evolution of NADH dehydrogenase subunit 2 in east Africancichlid fish. Mol Phylogenet Evol. 4:420-432.
-
(1995)
Mol Phylogenet Evol
, vol.4
, pp. 420-432
-
-
Kocher, T.D.1
Conroy, J.A.2
McKaye, K.R.3
Stauffer, J.R.4
Lockwood, S.F.5
-
51
-
-
0029053662
-
Structure and evolution ofteleost mitochondrial control regions
-
Lee W, Conroy J, Howell WH. 1995. Structure and evolution ofteleost mitochondrial control regions. J Mol Evol. 41:54-66.
-
(1995)
J Mol Evol
, vol.41
, pp. 54-66
-
-
Lee, W.1
Conroy, J.2
Howell, W.H.3
-
52
-
-
0018630884
-
Visual pigments in teleost fishes:effects of habitat, microhabitat, and behavior on visual systemevolution
-
Levine JS, MacNichol EF Jr. 1979. Visual pigments in teleost fishes:effects of habitat, microhabitat, and behavior on visual systemevolution. Sens Processes. 3:95-131.
-
(1979)
Sens Processes
, vol.3
, pp. 95-131
-
-
Levine, J.S.1
MacNichol Jr., E.F.2
-
53
-
-
0037952889
-
Visual biology of Hawaiiancoral reef fishes I. Ocular transmission and visual pigments
-
Losey GS, McFarland WN, Loew ER, Zamzow JP, Nelson PA,Marshall NJ, Montgomery WL. 2003. Visual biology of Hawaiiancoral reef fishes I. Ocular transmission and visual pigments.Copeia 2003:433-454.
-
(2003)
Copeia
, vol.2003
, pp. 433-454
-
-
Losey, G.S.1
McFarland, W.N.2
Loew, E.R.3
Zamzow, J.P.4
Nelson, P.A.5
Marshall, N.J.6
Montgomery, W.L.7
-
56
-
-
0025066547
-
Monophyleticorigin of Lake Victoria cichlid fishes suggested by mitochondrialDNA sequences
-
Meyer A, Kocher TD, Basasibwaki P, Wilson AC. 1990. Monophyleticorigin of Lake Victoria cichlid fishes suggested by mitochondrialDNA sequences. Nature 347:550-553.
-
(1990)
Nature
, vol.347
, pp. 550-553
-
-
Meyer, A.1
Kocher, T.D.2
Basasibwaki, P.3
Wilson, A.C.4
-
58
-
-
0027296788
-
Retention of an ancestral polymorphismin the mbuna species flock (Teleostei: Cichlidae) of Lake Malawi
-
Moran P, Kornfield I. 1993. Retention of an ancestral polymorphismin the mbuna species flock (Teleostei: Cichlidae) of Lake Malawi.Mol Biol Evol. 10:1015-1029.
-
(1993)
Mol Biol Evol
, vol.10
, pp. 1015-1029
-
-
Moran, P.1
Kornfield, I.2
-
59
-
-
26244436635
-
A window on the genetics of evolution: MC1R andplumage colouration in birds
-
Mundy NI. 2005. A window on the genetics of evolution: MC1R andplumage colouration in birds. Proc Biol Sci. 272:1633-1640.
-
(2005)
Proc Biol Sci
, vol.272
, pp. 1633-1640
-
-
Mundy, N.I.1
-
60
-
-
0003006889
-
Evolutionary adaptations of fishesto the photic environment
-
Crescitelli F, editor Berlin(Germany): Springer
-
Munz FW, McFarland WN. 1977. Evolutionary adaptations of fishesto the photic environment. In: Crescitelli F, editor. Handbook ofsensory physiology: the visual system in vertebrates. Berlin(Germany): Springer. p. 193-274.
-
(1977)
Handbook Ofsensory Physiology: The Visual System in Vertebrates
, pp. 193-274
-
-
Munz, F.W.1
McFarland, W.N.2
-
61
-
-
0033613376
-
Inferring the historical patterns of biologicalevolution
-
Pagel M. 1999. Inferring the historical patterns of biologicalevolution. Nature 401:877-884.
-
(1999)
Nature
, vol.401
, pp. 877-884
-
-
Pagel, M.1
-
62
-
-
9744245452
-
Bayesian estimation of ancestralcharacter states on phylogenies
-
Pagel M, Meade A, Barker D. 2004. Bayesian estimation of ancestralcharacter states on phylogenies. Syst Biol. 53:673-684.
-
(2004)
Syst Biol
, vol.53
, pp. 673-684
-
-
Pagel, M.1
Meade, A.2
Barker, D.3
-
63
-
-
41749087650
-
-
Reading (UK): School of Biological Sciences,University of Reading. Available from
-
Pagel M, Meade A. 2007. BayesTraits: Draft Manual. Distributedby the author. Reading (UK): School of Biological Sciences,University of Reading. Available from: http://www.evolution.rdg.ac.uk.
-
(2007)
BayesTraits: Draft Manual. Distributedby the Author
-
-
Pagel, M.1
Meade, A.2
-
64
-
-
1042304216
-
APE: Analyses of phylogeneticsand evolution in R language
-
Paradis E, Claude J, Strimmer K. 2004. APE: analyses of phylogeneticsand evolution in R language. Bioinformatics. 20:289-290.
-
(2004)
Bioinformatics
, vol.20
, pp. 289-290
-
-
Paradis, E.1
Claude, J.2
Strimmer, K.3
-
65
-
-
26244445167
-
Mix and match color vision: Tuning spectral sensitivity bydifferential opsin gene expression in Lake Malawi cichlids
-
Parry JW, Carleton KL, Spady T, Carboo A, Hunt DM, Bowmaker JK.2005. Mix and match color vision: tuning spectral sensitivity bydifferential opsin gene expression in Lake Malawi cichlids. CurrBiol 15:1734-1739.
-
(2005)
CurrBiol
, vol.15
, pp. 1734-1739
-
-
Parry, J.W.1
Carleton, K.L.2
Spady, T.3
Carboo, A.4
Hunt, D.M.5
Bowmaker, J.K.6
-
66
-
-
34248673939
-
Environmental complexityand social organization sculpt the brain in Lake Tanganyikancichlid fish
-
Pollen AA, Dobberfuhl AP, Scace J, Igulu MM, Renn SC,Shumway CA, Hofmann HA. 2007. Environmental complexityand social organization sculpt the brain in Lake Tanganyikancichlid fish. Brain Behav Evol. 70:21-39.
-
(2007)
Brain Behav Evol
, vol.70
, pp. 21-39
-
-
Pollen, A.A.1
Dobberfuhl, A.P.2
Scace, J.3
Igulu, M.M.4
Renn, S.C.5
Shumway, C.A.6
Hofmann, H.A.7
-
67
-
-
0031773680
-
MODELTEST: Testing the model ofDNA substitution
-
Posada D, Crandall KA. 1998. MODELTEST: testing the model ofDNA substitution. Bioinformatics. 14:817-818.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
68
-
-
29444454335
-
Genetic analysis of cavefishreveals molecular convergence in the evolution of albinism
-
Protas ME, Hersey C, Kochanek D, Zhou Y, Wilkens H, Jeffery WR,Zon LI, Borowsky R, Tabin CJ. 2006. Genetic analysis of cavefishreveals molecular convergence in the evolution of albinism. NatGenet. 38:107-111.
-
(2006)
Nat Genet
, vol.38
, pp. 107-111
-
-
Protas, M.E.1
Hersey, C.2
Kochanek, D.3
Zhou, Y.4
Wilkens, H.5
Jeffery, W.R.6
Zon, L.I.7
Borowsky, R.8
Tabin, C.J.9
-
69
-
-
33646191543
-
Repeated morphologicalevolution through cis-regulatory changes in a pleiotropic gene
-
Prud'homme B, Gompel N, Rokas A, Kassner VA, Williams TM,Yeh SD, True JR, Carroll SB. 2006. Repeated morphologicalevolution through cis-regulatory changes in a pleiotropic gene.Nature 440:1050-1053.
-
(2006)
Nature
, vol.440
, pp. 1050-1053
-
-
Prud'Homme, B.1
Gompel, N.2
Rokas, A.3
Kassner, V.A.4
Williams, T.M.5
Yeh, S.D.6
True, J.R.7
Carroll, S.B.8
-
70
-
-
72449158780
-
Sexual conflict resolved byinvasion of a novel sex determiner in Lake Malawi cichlid fishes
-
Roberts RB, Ser JR, Kocher TD. 2009. Sexual conflict resolved byinvasion of a novel sex determiner in Lake Malawi cichlid fishes.Science 326:998-1001.
-
(2009)
Science
, vol.326
, pp. 998-1001
-
-
Roberts, R.B.1
Ser, J.R.2
Kocher, T.D.3
-
71
-
-
0036005525
-
Phylogeny of the Lake Tanganyika cichlid species flock and itsrelationship to the Central and East African Haplochrominecichlid fish faunas
-
Salzburger W, Meyer A, Baric S, Verheyen E, Sturmbauer C. 2002.Phylogeny of the Lake Tanganyika cichlid species flock and itsrelationship to the Central and East African Haplochrominecichlid fish faunas. Syst Biol. 51:113-135.
-
(2002)
Syst Biol
, vol.51
, pp. 113-135
-
-
Salzburger, W.1
Meyer, A.2
Baric, S.3
Verheyen, E.4
Sturmbauer, C.5
-
72
-
-
0029838036
-
Adaptive radiation along genetic lines of leastresistance
-
Schluter D. 1996. Adaptive radiation along genetic lines of leastresistance. Evolution 50:1766-1774.
-
(1996)
Evolution
, vol.50
, pp. 1766-1774
-
-
Schluter, D.1
-
74
-
-
0031417707
-
Likelihood ofancestor states in adaptive radiation
-
Schluter D, Price T, Mooers A, Ludwig D. 1997. Likelihood ofancestor states in adaptive radiation. Evolution 51:1699-1711.
-
(1997)
Evolution
, vol.51
, pp. 1699-1711
-
-
Schluter, D.1
Price, T.2
Mooers, A.3
Ludwig, D.4
-
75
-
-
1642375725
-
Hybridization and adaptive radiation
-
Seehausen O. 2004. Hybridization and adaptive radiation. TrendsEcol Evol. 19:198-207.
-
(2004)
TrendsEcol Evol
, vol.19
, pp. 198-207
-
-
Seehausen, O.1
-
76
-
-
0037460210
-
Nuclearmarkers reveal unexpected genetic variation and a Congolese-Nilotic origin of the Lake Victoria cichlid species flock
-
Seehausen O, Koetsier E, Schneider MV, Chapman LJ, Chapman CA,Knight ME, Turner GF, van Alphen JJ, Bills R. 2003. Nuclearmarkers reveal unexpected genetic variation and a Congolese-Nilotic origin of the Lake Victoria cichlid species flock. Proc BiolSci. 270:129-137.
-
(2003)
Proc BiolSci
, vol.270
, pp. 129-137
-
-
Seehausen, O.1
Koetsier, E.2
Schneider, M.V.3
Chapman, L.J.4
Chapman, C.A.5
Knight, M.E.6
Turner, G.F.7
Van Alphen, J.J.8
Bills, R.9
-
77
-
-
53349119883
-
Speciation through sensory drive in cichlid fish
-
12 co-authors
-
Seehausen O, Terai Y, Magalhaes IS, et al. (12 co-authors). 2008.Speciation through sensory drive in cichlid fish. Nature455:620-627.
-
(2008)
Nature
, vol.455
, pp. 620-627
-
-
Seehausen, O.1
Terai, Y.2
Magalhaes, I.S.3
-
78
-
-
0030874938
-
Cichlid fish diversitythreatened by eutrophication that curbs sexual selection
-
Seehausen O, van Alphen JJ, Witte F. 1997. Cichlid fish diversitythreatened by eutrophication that curbs sexual selection.Science 277:1808-1811.
-
(1997)
Science
, vol.277
, pp. 1808-1811
-
-
Seehausen, O.1
Van Alphen, J.J.2
Witte, F.3
-
79
-
-
1942455815
-
Genetic anddevelopmental basis of evolutionary pelvic reduction inthreespine sticklebacks
-
Shapiro MD, Marks ME, Peichel CL, Blackman BK, Nereng KS,Jonsson B, Schluter D, Kingsley DM. 2004. Genetic anddevelopmental basis of evolutionary pelvic reduction inthreespine sticklebacks. Nature 428:717-723.
-
(2004)
Nature
, vol.428
, pp. 717-723
-
-
Shapiro, M.D.1
Marks, M.E.2
Peichel, C.L.3
Blackman, B.K.4
Nereng, K.S.5
Jonsson, B.6
Schluter, D.7
Kingsley, D.M.8
-
80
-
-
0035054406
-
Ocular media transmission of coralreef fish-can coral reef fish see ultraviolet light?
-
Siebeck UE, Marshall NJ. 2001. Ocular media transmission of coralreef fish-can coral reef fish see ultraviolet light? Vision Res.41:133-149.
-
(2001)
Vision Res
, vol.41
, pp. 133-149
-
-
Siebeck, U.E.1
Marshall, N.J.2
-
81
-
-
33748072399
-
Evolution of the cichlid visual palette throughontogenetic subfunctionalization of the opsin gene arrays
-
Spady TC, Parry JW, Robinson PR, Hunt DM, Bowmaker JK,Carleton KL. 2006. Evolution of the cichlid visual palette throughontogenetic subfunctionalization of the opsin gene arrays. MolBiol Evol. 23:1538-1547.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 1538-1547
-
-
Spady, T.C.1
Parry, J.W.2
Robinson, P.R.3
Hunt, D.M.4
Bowmaker, J.K.5
Carleton, K.L.6
-
82
-
-
19544387426
-
Adaptive molecular evolution in the opsin genes of rapidlyspeciating cichlid species
-
Spady TC, Seehausen O, Loew ER, Jordan RC, Kocher TD, Carleton KL.2005. Adaptive molecular evolution in the opsin genes of rapidlyspeciating cichlid species. Mol Biol Evol. 22:1412-1422.
-
(2005)
Mol Biol Evol
, vol.22
, pp. 1412-1422
-
-
Spady, T.C.1
Seehausen, O.2
Loew, E.R.3
Jordan, R.C.4
Kocher, T.D.5
Carleton, K.L.6
-
83
-
-
0032413121
-
Explosive speciation in cichlid fishes of theAfrican Great Lakes: A dynamic model of adaptive radiation
-
Sturmbauer C. 1998. Explosive speciation in cichlid fishes of theAfrican Great Lakes: a dynamic model of adaptive radiation.J Fish Biol. 53:18-36.
-
(1998)
J Fish Biol
, vol.53
, pp. 18-36
-
-
Sturmbauer, C.1
-
84
-
-
0038517876
-
Regulatoryevolution of shavenbaby/ovo underlies multiple cases ofmorphological parallelism
-
Sucena E, Delon I, Jones I, Payre F, Stern DL. 2003. Regulatoryevolution of shavenbaby/ovo underlies multiple cases ofmorphological parallelism. Nature 424:935-938.
-
(2003)
Nature
, vol.424
, pp. 935-938
-
-
Sucena, E.1
Delon, I.2
Jones, I.3
Payre, F.4
Stern, D.L.5
-
85
-
-
17244374513
-
Parallelism of amino acid changes atthe RH1 affecting spectral sensitivity among deep-water cichlidsfrom Lakes Tanganyika and Malawi
-
Sugawara T, Terai Y, Imai H, Turner GF, Koblmuller S, Sturmbauer C,Shichida Y, Okada N. 2005. Parallelism of amino acid changes atthe RH1 affecting spectral sensitivity among deep-water cichlidsfrom Lakes Tanganyika and Malawi. Proc Natl Acad Sci USA.102:5448-5453.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 5448-5453
-
-
Sugawara, T.1
Terai, Y.2
Imai, H.3
Turner, G.F.4
Koblmuller, S.5
Sturmbauer, C.6
Shichida, Y.7
Okada, N.8
-
86
-
-
0036791133
-
Natural selection of therhodopsin gene during the adaptive radiation of East AfricanGreat Lakes cichlid fishes
-
Sugawara T, Terai Y, Okada N. 2002. Natural selection of therhodopsin gene during the adaptive radiation of East AfricanGreat Lakes cichlid fishes. Mol Biol Evol. 19:1807-1811.
-
(2002)
Mol Biol Evol
, vol.19
, pp. 1807-1811
-
-
Sugawara, T.1
Terai, Y.2
Okada, N.3
-
88
-
-
0026864799
-
Unusual mitochondrial DNApolymorphism in two local populations of blue tit Paruscaeruleus
-
Taberlet P, Meyer A, Bouvet J. 1992. Unusual mitochondrial DNApolymorphism in two local populations of blue tit Paruscaeruleus. Mol Ecol. 1:27-36.
-
(1992)
Mol Ecol.
, vol.1
, pp. 27-36
-
-
Taberlet, P.1
Meyer, A.2
Bouvet, J.3
-
90
-
-
0842332898
-
Systematics of Tanganyikan cichlid fishes(Teleostei: Perciformes
-
Takahashi T. 2003. Systematics of Tanganyikan cichlid fishes(Teleostei: Perciformes). Ichthyiol Res. 50:367-382.
-
(2003)
Ichthyiol Res
, vol.50
, pp. 367-382
-
-
Takahashi, T.1
-
91
-
-
33845481429
-
Divergent selection on opsins drives incipient speciation in LakeVictoria cichlids
-
14 co-authors
-
Terai Y, Seehausen O, Sasaki T, et al. (14 co-authors). 2006.Divergent selection on opsins drives incipient speciation in LakeVictoria cichlids. PLoS Biol. 4:e433.
-
(2006)
PLoS Biol
, vol.4
-
-
Terai, Y.1
Seehausen, O.2
Sasaki, T.3
-
92
-
-
84967771032
-
Carotenoids and the visual cycle
-
Wald G. 1935. Carotenoids and the visual cycle. J Gen Physiol.19:351-371.
-
(1935)
J Gen Physiol
, vol.19
, pp. 351-371
-
-
Wald, G.1
-
95
-
-
0002602136
-
Ecomorphology of feeding in "goby-like" cichlid fishes in Lake Tanganyika
-
Yamaoka K, Hori M, Kuratani S. 1986. Ecomorphology of feeding in"goby-like" cichlid fishes in Lake Tanganyika. Physiol Ecol Japan.23:17-29.
-
(1986)
Physiol Ecol Japan
, vol.23
, pp. 17-29
-
-
Yamaoka, K.1
Hori, M.2
Kuratani, S.3
-
96
-
-
0037202369
-
Molecular evolution of color vision invertebrates
-
Yokoyama S. 2002. Molecular evolution of color vision invertebrates. Gene 300:69-78.
-
(2002)
Gene
, vol.300
, pp. 69-78
-
-
Yokoyama, S.1
-
97
-
-
52949133360
-
Evolution of dim-light and color vision pigments
-
Yokoyama S. 2008. Evolution of dim-light and color vision pigments.Annu Rev Genomics Hum Genet. 9:259-282.
-
(2008)
Annu Rev Genomics Hum Genet
, vol.9
, pp. 259-282
-
-
Yokoyama, S.1
-
98
-
-
51649122492
-
Elucidation of phenotypicadaptations: Molecular analyses of dim-light vision proteins invertebrates
-
Yokoyama S, Tada T, Zhang H, Britt L. 2008. Elucidation of phenotypicadaptations: molecular analyses of dim-light vision proteins invertebrates. Proc Natl Acad Sci USA. 105:13480-13485.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 13480-13485
-
-
Yokoyama, S.1
Tada, T.2
Zhang, H.3
Britt, L.4
-
99
-
-
0030484359
-
Adaptive evolution of photoreceptorsand visual pigments in vertebrates
-
Yokoyama S, Yokoyama R. 1996. Adaptive evolution of photoreceptorsand visual pigments in vertebrates. Ann Rev Ecol Syst. 27:543-567.
-
(1996)
Ann Rev Ecol Syst
, vol.27
, pp. 543-567
-
-
Yokoyama, S.1
Yokoyama, R.2
|