Transcription of LINE-derived sequences in exercise-induced stress in horses

Animal Genetics

Volumn 41, Issue SUPPL. 2, 2010, Pages 23-27

  Capomaccio, S ^a   Verini Supplizi, A ^a   Galla, G ^b   Vitulo, N ^b   Barcaccia, G ^b   Felicetti, M ^a   Silvestrelli, M ^a   Cappelli, K ^a  

^a UNIVERSITY OF PERUGIA   (Italy)

^b UNIVERSITY OF PADOVA   (Italy)

Author keywords

Exercise; Exonization; Horse; Stress; Transposable elements

Indexed keywords

EQUIDAE; MAMMALIA; VERTEBRATA;

ANIMAL; ANIMAL EXPERIMENT; GENETICS; HORSE; LONG INTERSPERSED REPEAT; METABOLISM; MONONUCLEAR CELL;

ANIMALS; HORSES; LEUKOCYTES, MONONUCLEAR; LONG INTERSPERSED NUCLEOTIDE ELEMENTS; PHYSICAL CONDITIONING, ANIMAL;

EID: 78449277040     PISSN: 02689146     EISSN: 13652052     Source Type: Journal    
DOI: 10.1111/j.1365-2052.2010.02094.x     Document Type: Conference Paper

References (14)

1. Cappelli K., Verini-Supplizi A., Capomaccio S., &, Silvestrelli M., (2007) Analysis of peripheral blood mononuclear cells gene expression in endurance horses by cDNA-AFLP technique. Research in Veterinary Science 82, 335-43.
2. Cappelli K., Felicetti M., Capomaccio S., Spinsanti G., Silvestrelli M., &, Verini-Supplizi A., (2008) Exercise induced stress in horses: Selection of the most stable reference genes for quantitative RT-PCR normalization. BMC Molecular Biology 9, 49.
3. Conesa A., Gotz S., Garcia-Gomez J., Terol J., Talon M., &, Robles M., (2005) Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research. Bioinformatics 21, 3674-6.
4. Goodier J.L., &, Kazazian H.H., (2008) Retrotransposons revisited: the restraint and rehabilitation of parasites. Cell 135, 23-35.
5. Han J.S., Szak S.T., &, Boeke J.D., (2004) Transcriptional disruption by the L1 retrotransposon and implications for mammalian transcriptomes. Nature 429, 268-74.
6. Kawai T., Morita K., Masuda K., Nishida K., Sekiyama A., Teshima-Kondo S., Nakaya Y., Ohta M., Saito T., &, Rokutan K., (2007) Physical exercise-associated gene expression signatures in peripheral blood. Clinical Journal of Sport Medicine 17, 375-83.
7. Kent W.J., (2002) BLAT-The BLAST-like alignment tool. Genome Research 12, 656-64.
8. Li T., &, Schmid C.W., (2001) Differential stress induction of individual Alu loci: implications for transcription and retrotransposition. Gene 276, 135-41.
9. Lin L., Shen S., Tye A., Cai J.J., Jiang P., Davidson B.L., &, Xing Y., (2008) Diverse splicing patterns of exonized Alu elements in human tissues. PLoS Genetics 4, e1000225.
10. Mersch B., Sela N., Ast G., Suhai S., &, Hotz-Wagenblatt A., (2007) SERpredict: Detection of tissue-or tumor-specific isoforms generated through exonization of transposable elements. BMC Genetics 8, 78.
11. Ramos K.S., (2009) Unraveling genetic regulatory networks of mammalian retroelements. BMC Proceedings 3, S3.
12. Schulz W.A., (2006) L1 Retrotransposons in human cancers. Journal of Biomedicine & Biotechnology 2006, 83672.
13. Teneng I., Stribinskis V., &, Ramos K.S., (2007) Context-specific regulation of LINE-1. Genes to Cells 12, 1101-10.
14. Wade C.M., Giulotto E., Sigurdsson S., etal. (2009) Genome sequence, comparative analysis, and population genetics of the domestic horse. Science 326, 865-7.