메뉴 건너뛰기




Volumn 409, Issue 1, 2010, Pages 134-139

Sulfide formation in freshwater sediments, by sulfate-reducing microorganisms with diverse tolerance to salt

Author keywords

Freshwater wetlands; Salinisation; Sediment; Sulfate reducing bacteria

Indexed keywords

ACID VOLATILE SULFIDES; ADDED SALT; COMMUNITY STRUCTURES; COMPARATIVE SEQUENCE ANALYSIS; FRESHWATER SEDIMENT; FRESHWATER SYSTEMS; FRESHWATER WETLANDS; INORGANIC MINERAL; KNOWLEDGE GAPS; MESOCOSMS; MICROBIAL COMMUNITIES; MICROBIOTAS; POTENTIAL HARM; RE-OXIDATION; SALINISATION; SULFATE REDUCING; SULFATE REDUCING BACTERIA; SULFATE-REDUCER; SULFIDE FORMATION; SULFITE REDUCTASE;

EID: 78149356962     PISSN: 00489697     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.scitotenv.2010.08.062     Document Type: Article
Times cited : (24)

References (39)
  • 2
    • 22744447066 scopus 로고    scopus 로고
    • Molecular characterization of sulfate-reducing bacteria in a New England salt marsh
    • Bahr M., Crump B.C., Klepac-Ceraj T.A., Sogin M.L., Hobbie J.E. Molecular characterization of sulfate-reducing bacteria in a New England salt marsh. Environ Microbiol 2005, 7:1175-1185.
    • (2005) Environ Microbiol , vol.7 , pp. 1175-1185
    • Bahr, M.1    Crump, B.C.2    Klepac-Ceraj, T.A.3    Sogin, M.L.4    Hobbie, J.E.5
  • 3
    • 0025925582 scopus 로고
    • Microbial sulfate reduction in littoral sediment of Lake Constance
    • Bak F., Pfennig N. Microbial sulfate reduction in littoral sediment of Lake Constance. FEMS Microbiol Ecol 1991, 85:31-42.
    • (1991) FEMS Microbiol Ecol , vol.85 , pp. 31-42
    • Bak, F.1    Pfennig, N.2
  • 4
    • 70449656810 scopus 로고    scopus 로고
    • Rehabilitation options for inland waterways impacted by sulfidic sediments - a synthesis
    • Baldwin D.S., Fraser M. Rehabilitation options for inland waterways impacted by sulfidic sediments - a synthesis. J Environ Manage 2009, 91:311-319.
    • (2009) J Environ Manage , vol.91 , pp. 311-319
    • Baldwin, D.S.1    Fraser, M.2
  • 5
    • 33847611884 scopus 로고    scopus 로고
    • Development of a protocol for recognizing sulfidic sediments (potential acid sulfate soils) in freshwater wetlands
    • Baldwin D.S., Hall K.C., Rees G.N., Richardson A.J. Development of a protocol for recognizing sulfidic sediments (potential acid sulfate soils) in freshwater wetlands. Ecol Manage Rest 2007, 8:56-60.
    • (2007) Ecol Manage Rest , vol.8 , pp. 56-60
    • Baldwin, D.S.1    Hall, K.C.2    Rees, G.N.3    Richardson, A.J.4
  • 6
    • 33144486693 scopus 로고    scopus 로고
    • Acid-volatile sulfide oxidation in coastal floodplain drains: iron-sulfur cycling and effects on water quality
    • Burton E.D., Bush R.T., Sullivan L.A. Acid-volatile sulfide oxidation in coastal floodplain drains: iron-sulfur cycling and effects on water quality. Environ Sci Technol 2006, 40:1217-1222.
    • (2006) Environ Sci Technol , vol.40 , pp. 1217-1222
    • Burton, E.D.1    Bush, R.T.2    Sullivan, L.A.3
  • 7
    • 45449093559 scopus 로고    scopus 로고
    • Mobility of arsenic and selected metals during re-flooding of iron- and organic-rich acid-sulfate soil
    • Burton E.D., Bush R.T., Sullivan L.A., Johnston S.G., Hocking R.K. Mobility of arsenic and selected metals during re-flooding of iron- and organic-rich acid-sulfate soil. Chem Geol 2008, 253:64-73.
    • (2008) Chem Geol , vol.253 , pp. 64-73
    • Burton, E.D.1    Bush, R.T.2    Sullivan, L.A.3    Johnston, S.G.4    Hocking, R.K.5
  • 8
    • 0036946818 scopus 로고    scopus 로고
    • Composition and function of sulfate-reducing prokaryotes in eutrophic and pristine area of the Florida Everglades
    • Castro H., Reddy K.R., Orgam A. Composition and function of sulfate-reducing prokaryotes in eutrophic and pristine area of the Florida Everglades. Appl Environ Microbiol 2002, 68:6129-6137.
    • (2002) Appl Environ Microbiol , vol.68 , pp. 6129-6137
    • Castro, H.1    Reddy, K.R.2    Orgam, A.3
  • 10
    • 33846462490 scopus 로고    scopus 로고
    • Analysis of diversity and activity of sulfate-reducing bacterial communities in sulfidogenic bioreactors using 16S rRNA and dsrB genes as molecular markers
    • Dar S.A., Yao L., van Dongen U., Kuenen J.G., Muyzer G. Analysis of diversity and activity of sulfate-reducing bacterial communities in sulfidogenic bioreactors using 16S rRNA and dsrB genes as molecular markers. Appl Environ Microbiol 2007, 73:594-604.
    • (2007) Appl Environ Microbiol , vol.73 , pp. 594-604
    • Dar, S.A.1    Yao, L.2    van Dongen, U.3    Kuenen, J.G.4    Muyzer, G.5
  • 11
    • 3042745497 scopus 로고    scopus 로고
    • FISH shows that Desulfotomaculum spp. are the dominating sulfate-reducing bacteria in a pristine aquifer
    • Detmers J., Strauss H., Schulte U., Bergman A., Knittel K., Kuever J. FISH shows that Desulfotomaculum spp. are the dominating sulfate-reducing bacteria in a pristine aquifer. Microb Ecol 2004, 47:236-242.
    • (2004) Microb Ecol , vol.47 , pp. 236-242
    • Detmers, J.1    Strauss, H.2    Schulte, U.3    Bergman, A.4    Knittel, K.5    Kuever, J.6
  • 12
    • 0013258174 scopus 로고    scopus 로고
    • Molecular characterization of sulfate-reducing bacteria in the Guyamas Basin
    • Dhillon A., Teske A., Dillon J., Stahl D.A., Sogin M.L. Molecular characterization of sulfate-reducing bacteria in the Guyamas Basin. Appl Environ Microbiol 2003, 69:2765-2772.
    • (2003) Appl Environ Microbiol , vol.69 , pp. 2765-2772
    • Dhillon, A.1    Teske, A.2    Dillon, J.3    Stahl, D.A.4    Sogin, M.L.5
  • 13
    • 33748759818 scopus 로고    scopus 로고
    • Distribution of inland wetlands with sulfidic sediments in the Murray-Darling Basin, Australia
    • Hall K.C., Baldwin D.S., Rees G.N., Richardson A.J. Distribution of inland wetlands with sulfidic sediments in the Murray-Darling Basin, Australia. Sci Total Environ 2006, 370:235-244.
    • (2006) Sci Total Environ , vol.370 , pp. 235-244
    • Hall, K.C.1    Baldwin, D.S.2    Rees, G.N.3    Richardson, A.J.4
  • 14
    • 0035030255 scopus 로고    scopus 로고
    • Sulphate reduction and sulphur cycling in lake sediments: a review
    • Holmer M., Storkholm P. Sulphate reduction and sulphur cycling in lake sediments: a review. Freshwa Biol 2001, 46:431-451.
    • (2001) Freshwa Biol , vol.46 , pp. 431-451
    • Holmer, M.1    Storkholm, P.2
  • 15
    • 36849073678 scopus 로고    scopus 로고
    • Sequencing breakthroughs for genomic ecology and evolutionary biology
    • Hudson M.E. Sequencing breakthroughs for genomic ecology and evolutionary biology. Mol Ecol Resour 2008, 8:3-17.
    • (2008) Mol Ecol Resour , vol.8 , pp. 3-17
    • Hudson, M.E.1
  • 16
    • 33644950423 scopus 로고    scopus 로고
    • Non-sulfate-reducing, syntrophic bacteria affiliated with Desulfotomaculum cluster I are widely distributed in methanogenic environments
    • Imachi H., Sekiguchi Y., Kamagata Y., Loy A., Qiu Y.L., Hugenholtz P., et al. Non-sulfate-reducing, syntrophic bacteria affiliated with Desulfotomaculum cluster I are widely distributed in methanogenic environments. Appl Environ Microbiol 2006, 72:2080-2091.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 2080-2091
    • Imachi, H.1    Sekiguchi, Y.2    Kamagata, Y.3    Loy, A.4    Qiu, Y.L.5    Hugenholtz, P.6
  • 17
    • 0035146417 scopus 로고    scopus 로고
    • Historical stream salinity trends and catchment scale salt balances in the Murray-Darling Basin, Australia
    • Jolly I.D., Williamson D.R., Gilfedder M., Walker G.R., Morton R., Robinson G., et al. Historical stream salinity trends and catchment scale salt balances in the Murray-Darling Basin, Australia. Mar Freshw Res 2001, 52:53-63.
    • (2001) Mar Freshw Res , vol.52 , pp. 53-63
    • Jolly, I.D.1    Williamson, D.R.2    Gilfedder, M.3    Walker, G.R.4    Morton, R.5    Robinson, G.6
  • 18
    • 34247174463 scopus 로고    scopus 로고
    • Diversity of sulfate-reducing bacteria from an extreme hypersaline sediment, Great Salt Lake (Utah)
    • Kjeldsen K.U., Loy A., Jakobsen T.F., Thomsen T.R., Wagner M., Ingvorsen K. Diversity of sulfate-reducing bacteria from an extreme hypersaline sediment, Great Salt Lake (Utah). FEMS Microbiol Ecol 2007, 60:287-298.
    • (2007) FEMS Microbiol Ecol , vol.60 , pp. 287-298
    • Kjeldsen, K.U.1    Loy, A.2    Jakobsen, T.F.3    Thomsen, T.R.4    Wagner, M.5    Ingvorsen, K.6
  • 19
    • 77955369316 scopus 로고    scopus 로고
    • Microbial dynamics in UASB bioreactor granules in response to short-term changes in substrate feed
    • Kovacik W.P.J., Scholten J.C.M., Culley D., Kickey R., Zhang W., Brockman F.J. Microbial dynamics in UASB bioreactor granules in response to short-term changes in substrate feed. Microbiology 2010, 156:2418-2427.
    • (2010) Microbiology , vol.156 , pp. 2418-2427
    • Kovacik, W.P.J.1    Scholten, J.C.M.2    Culley, D.3    Kickey, R.4    Zhang, W.5    Brockman, F.J.6
  • 20
    • 33644959468 scopus 로고    scopus 로고
    • Diversity of the dsrAB (dissimilatory sulfur reductase) gene sequences retrieved from two contrasting mudflats of the Seine estuary, France
    • Leloup J., Quillet L., Berthe T., Petit F. Diversity of the dsrAB (dissimilatory sulfur reductase) gene sequences retrieved from two contrasting mudflats of the Seine estuary, France. FEMS Microbiol Ecol 2005, 55:230-238.
    • (2005) FEMS Microbiol Ecol , vol.55 , pp. 230-238
    • Leloup, J.1    Quillet, L.2    Berthe, T.3    Petit, F.4
  • 21
    • 0020660776 scopus 로고
    • Sulfate-reducers can outcompete methanogens at freshwater sulfate concentrations
    • Lovley D.R., Klug M.J. Sulfate-reducers can outcompete methanogens at freshwater sulfate concentrations. Appl Environ Microbiol 1983, 45:187-192.
    • (1983) Appl Environ Microbiol , vol.45 , pp. 187-192
    • Lovley, D.R.1    Klug, M.J.2
  • 22
    • 33750694334 scopus 로고    scopus 로고
    • Acidification, salinization and fish kills at an inland wetland in south-eastern Australia following partial drying
    • McCarthy B., Conallin A., D'Santos P., Baldwin D. Acidification, salinization and fish kills at an inland wetland in south-eastern Australia following partial drying. Ecol Manage Rest 2006, 7:221-223.
    • (2006) Ecol Manage Rest , vol.7 , pp. 221-223
    • McCarthy, B.1    Conallin, A.2    D'Santos, P.3    Baldwin, D.4
  • 24
    • 33745671276 scopus 로고    scopus 로고
    • The impact of crop residue amendments and lime on microbial community structure and nitrogen-fixing bacteria in the wheat rhizosphere
    • Nelson D.R., Mele P.M. The impact of crop residue amendments and lime on microbial community structure and nitrogen-fixing bacteria in the wheat rhizosphere. Aust J Soil Res 2006, 44:319-329.
    • (2006) Aust J Soil Res , vol.44 , pp. 319-329
    • Nelson, D.R.1    Mele, P.M.2
  • 25
    • 34247530796 scopus 로고    scopus 로고
    • The impact of salinity pulses on the emergence of plant and zooplankton from wetland seed and egg banks
    • Nielsen D.L., Brock M.A., Petrie R., Crosslé K. The impact of salinity pulses on the emergence of plant and zooplankton from wetland seed and egg banks. Freshw Biol 2007, 52:784-795.
    • (2007) Freshw Biol , vol.52 , pp. 784-795
    • Nielsen, D.L.1    Brock, M.A.2    Petrie, R.3    Crosslé, K.4
  • 26
    • 0020646506 scopus 로고
    • Sulphur in sediments chronicles past changes in lake acidification
    • Nriagu J.O., Coker R.D. Sulphur in sediments chronicles past changes in lake acidification. Nature 1983, 303:692-694.
    • (1983) Nature , vol.303 , pp. 692-694
    • Nriagu, J.O.1    Coker, R.D.2
  • 27
    • 13544259591 scopus 로고    scopus 로고
    • Phylogeography of sulfate-reducing bacteria among disturbed sediments, disclosed by analysis of the dissimilatory sulfite reductase genes (dsrAB)
    • Pérez-Jiménez J.R., Kerkhof L.J. Phylogeography of sulfate-reducing bacteria among disturbed sediments, disclosed by analysis of the dissimilatory sulfite reductase genes (dsrAB). Appl Environ Microbiol 2005, 71:1004-1011.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 1004-1011
    • Pérez-Jiménez, J.R.1    Kerkhof, L.J.2
  • 28
    • 0034942587 scopus 로고    scopus 로고
    • Use of 16S rRNA-targeted oligonucleotide probes to investigate the distribution of sulphate-reducing bacteria in estuarine sediments
    • Purdy K.J., Nedwell D.B., Embley T.M., Takii S. Use of 16S rRNA-targeted oligonucleotide probes to investigate the distribution of sulphate-reducing bacteria in estuarine sediments. FEMS Microbiol Ecol 2001.
    • (2001) FEMS Microbiol Ecol
    • Purdy, K.J.1    Nedwell, D.B.2    Embley, T.M.3    Takii, S.4
  • 29
    • 15444362001 scopus 로고    scopus 로고
    • Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness
    • Schloss P.D., Handelsman J. Introducing DOTUR, a computer program for defining operational taxonomic units and estimating species richness. Appl Environ Microbiol 2005, 71:1501-1507.
    • (2005) Appl Environ Microbiol , vol.71 , pp. 1501-1507
    • Schloss, P.D.1    Handelsman, J.2
  • 30
    • 33646116078 scopus 로고    scopus 로고
    • Introducing TreeClimber, a test to compare microbial community structures
    • Schloss P.D., Handelsman J. Introducing TreeClimber, a test to compare microbial community structures. Appl Environ Microbiol 2006, 72:2379-2384.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 2379-2384
    • Schloss, P.D.1    Handelsman, J.2
  • 31
    • 0028890520 scopus 로고
    • Internal eutrophication, iron limitation and sulphide accumulation due to the inlet of river Rhine water in peaty shallow waters in the Netherlands
    • Smolders A., Roelofs J.G.M. Internal eutrophication, iron limitation and sulphide accumulation due to the inlet of river Rhine water in peaty shallow waters in the Netherlands. Arch Hydrobiol 1995, 133:349-365.
    • (1995) Arch Hydrobiol , vol.133 , pp. 349-365
    • Smolders, A.1    Roelofs, J.G.M.2
  • 32
    • 0034092296 scopus 로고    scopus 로고
    • A modified chromium-reducible sulfur method for reduced organic sulfur: optimum reaction time for acid sulfate soil
    • Sullivan L.A., Bush R.T., McConchie D.M. A modified chromium-reducible sulfur method for reduced organic sulfur: optimum reaction time for acid sulfate soil. Aust J Soil Res 2000, 38:729-734.
    • (2000) Aust J Soil Res , vol.38 , pp. 729-734
    • Sullivan, L.A.1    Bush, R.T.2    McConchie, D.M.3
  • 33
    • 4143105592 scopus 로고    scopus 로고
    • Acid sulfate soil drain ooze: distribution, behaviour and implications for acidification and deoxygenation of waterways
    • Science Press, Beijing, C. Lin, M. Melville, L.A. Sullivan (Eds.)
    • Sullivan L.A., Bush R.T., Fyfe D. Acid sulfate soil drain ooze: distribution, behaviour and implications for acidification and deoxygenation of waterways. Acid sulfate soils in Australia and China 2002, 91-99. Science Press, Beijing. C. Lin, M. Melville, L.A. Sullivan (Eds.).
    • (2002) Acid sulfate soils in Australia and China , pp. 91-99
    • Sullivan, L.A.1    Bush, R.T.2    Fyfe, D.3
  • 34
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0
    • Tamura K., Dudley J., Nei M., Kumar S. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 2007, 24:1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 35
    • 0035316138 scopus 로고    scopus 로고
    • Biogeochemical and molecular signatures of anaerobic methane oxidation in a marine sediment
    • Thomsen T.R., Finster K., Ramsing N.B. Biogeochemical and molecular signatures of anaerobic methane oxidation in a marine sediment. Appl Environ Microbiol 2001, 67:1646-1656.
    • (2001) Appl Environ Microbiol , vol.67 , pp. 1646-1656
    • Thomsen, T.R.1    Finster, K.2    Ramsing, N.B.3
  • 36
    • 0028163345 scopus 로고
    • Sulfate reduction and diffusion in sediments of Little Rock Lake, Wisconsin
    • Urban N.R., Brezonik P.L., Baker L.A., Sherman L.A. Sulfate reduction and diffusion in sediments of Little Rock Lake, Wisconsin. Limnol Oceanogr 1994, 39:797-815.
    • (1994) Limnol Oceanogr , vol.39 , pp. 797-815
    • Urban, N.R.1    Brezonik, P.L.2    Baker, L.A.3    Sherman, L.A.4
  • 37
    • 0032463021 scopus 로고    scopus 로고
    • Phylogeny of dissimilatory sulfite reductase supports an early origin of sulfate respiration
    • Wagner M., Rogers A.J., Flax J.L., Brusseau G.A., Stahl D.A. Phylogeny of dissimilatory sulfite reductase supports an early origin of sulfate respiration. J Bacteriol 1998, 180:2975-2982.
    • (1998) J Bacteriol , vol.180 , pp. 2975-2982
    • Wagner, M.1    Rogers, A.J.2    Flax, J.L.3    Brusseau, G.A.4    Stahl, D.A.5
  • 38
    • 33746778517 scopus 로고    scopus 로고
    • A comparison of stable-isotope probing of DNA and phospholipid fatty acids to study prokaryote functional diversity in sulfate-reducing marine sediment
    • Webster G., Watt L.C., Rinna J., Fry J.C., Evershed R.P., Parkes R.J., et al. A comparison of stable-isotope probing of DNA and phospholipid fatty acids to study prokaryote functional diversity in sulfate-reducing marine sediment. Environ Microbiol 2006, 8:1575-1589.
    • (2006) Environ Microbiol , vol.8 , pp. 1575-1589
    • Webster, G.1    Watt, L.C.2    Rinna, J.3    Fry, J.C.4    Evershed, R.P.5    Parkes, R.J.6
  • 39
    • 0022171226 scopus 로고
    • An evaluation of wet chemical methods for quantifying sulfur fractions in freshwater wetland peat
    • Wieder R.K., Lang G.E., Granus V.A. An evaluation of wet chemical methods for quantifying sulfur fractions in freshwater wetland peat. Limnol Oceanogr 1985, 30:1109-1115.
    • (1985) Limnol Oceanogr , vol.30 , pp. 1109-1115
    • Wieder, R.K.1    Lang, G.E.2    Granus, V.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.