Evolutionary response of Caragana (Fabaceae) to Qinghai-Tibetan Plateau uplift and Asian interior aridification

Plant Systematics and Evolution

Volumn 288, Issue 3-4, 2010, Pages 191-199

  Zhang, Ming Li ^a,b   Fritsch, Peter W ^c  

^a XINJIANG INSTITUTE OF ECOLOGY AND GEOGRAPHY   (China)

^b INSTITUTE OF BOTANY   (China)

^c CALIFORNIA ACADEMY OF SCIENCES   (United States)

Author keywords

Biogeography; Caragana; Himalayan motion; Molecular phylogenetic dating; Qinghai Tibetan Plateau uplift

Indexed keywords

CARAGANA; FABACEAE;

EID: 78049435063     PISSN: 03782697     EISSN: 16156110     Source Type: Journal    
DOI: 10.1007/s00606-010-0324-z     Document Type: Article

References (64)

1. An ZS, Kutzbach JE, Prell WL, Port SC (2001) Evolution of Asian monsoons and phased uplift of the Himalaya-Tibetan plateau since Late Miocene times. Nature 411: 62-66.
2. 4 grasses and savanna-adapted ungulates. Global Change Biol 15: 2397-2417.
3. 4 ecosystems as an indicator of global ecological change in the late Miocene. Nature 361: 344-345.
4. Cerling TE, Harris JM, MacFadden BJ, Leakey MG, Quade J, Eisenmann V, Ehleringer JR (1997) Global vegetation change through the Miocene/Pliocene boundary. Nature 389: 153-189.
5. Chen SY, Xia T, Wang YJ, Liu JQ, Chen SL (2005) Molecular systematics and biogeography of Crawfurdia, Metagentiana and Tripterospermum (Gentianaceae) based on nuclear ribosomal and plastid DNA sequences. Ann Bot 96: 413-424.
6. Chen SY, Wu GL, Zhang DJ, Gao QB, Duan YZ, Zhang FQ, Chen SL (2008) Potential refugium on the Qinghai-Tibet Plateau revealed by the chloroplast DNA phylogeography of the alpine species Metagentiana striata (Gentianaceae). Bot J Linn Soc 157: 125-140.
7. Cheng HB, Powell C, An ZS, Zhou J, Dong GR (2000) Pliocene uplift of the northern Tibetan Plateau. Geology 28: 715-718.
8. 4 photosynthesis in grasses. Curr Biol 18: 37-43.
9. Coleman M, Hodges K (1995) Evidence for Tibetan Plateau uplift before 14 Myr age from new minimum estimate for east-west extension. Nature 374: 49-52.
10. Cowman PF, Bellwood DR, Herwerden L (2009) Dating the evolutionary origins of wrasse lineages (Labridae) and the rise of trophic novelty on coral reefs. Mol Phylogen Evol 52: 621-631.
11. Drummond AJ, Rambaut A (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7: 214.
12. Guo ZT, Ruddiman WF, Hao QZ, Wu HB, Qiao YS, Zhu RX, Peng SZ, Wei JJ, Yuan BY, Liu TS (2002) Onset of Asian desertification by 22 Myr ago inferred from loess deposits in China. Nature 416: 159-163.
13. Guo XG, He SP, Zhang YG (2005) Phylogeny and biogeography of Chinese sisorid catfishes re-examined using mitochondrial cytochrome b and 16S rRNA gene sequences. Mol Phylogen Evol 35: 344-362.
14. Guo ZT, Sun B, Zhang ZS, Peng SZ, Xiao GQ, Ge JY, Hao QZ, Qiao YS, Liang MY, Liu JF, Yin QZ, Wei JJ (2008) A major reorganization of Asian climate by the early Miocene. Climate Past 4: 153-174.
15. Harrison TM, Coplend P, Kidd WSF, Yin A (1992) Raising Tibet. Science 255: 1663-1670.
16. Knapp M, Stöckler K, Havell D, Delsuc F, Sebastiani F, Lockhart PJ (2005) Relaxed molecular clock provides evidence for long-distance dispersal of Nothofagus (southern beech). Plos Biol 3: 0038-0043.
17. Komarov VL (1908) Generis Caragana monographia. Acta Horti Petrop 29: 179-388.
18. Komarov VL (1947) VL Komarov Opera selecta. Academic Science URSS, Moscow, pp 159-342.
19. Lavin M, Herendeen PS, Wojciechowski MF (2005) Evolutionary rates analysis of Leguminosae implicates a rapid diversification of lineages during the Tertiary. Syst Biol 54: 575-594.
20. Lewis GP, Schrire BD, Mackinder BA, Lock M (eds) (2005) Legumes of the world. Royal Botanic Gardens, Kew.
21. Li JJ, Fang XM (1998) Research on the uplift of the Qinghai-Xizang Plateau and environmental changes. Chin Sci Bull 43: 1569-1574.
22. Liu JQ, Gao TG, Chen ZD, Lu AM (2002) Molecular phylogeny and biogeography of the Qinghai-Tibet Plateau endemic Nannoglottis (Asteraceae). Mol Phylogen Evol 23: 307-325.
23. Liu JQ, Wang YJ, Wang AL, Hedeaki O, Abbott R (2006) Radiation and diversification within the Ligularia-Cremanthodium-Parasenecio complex (Asteraceae) triggered by uplift of the Qinghai-Tibetan Plateau. Mol Phylogen Evol 38: 31-49.
24. Lock JM (2005) Tribe Hedysareae. In: Lewis G, Schrire B, MacKinder B, Lock M (eds) Legumes of the world. Royal Botanic Gardens, Kew, pp 489-495.
25. Meng LH, Yang R, Abbott RJ, Miehe G, Liu JQ (2007) Mitochondrial and chloroplast phylogeography of Picea crassifolia Kom. (Pinaceae) in the Qinghai-Tibetan Plateau and adjacent highlands. Mol Ecol 16: 4128-4137.
26. Molnar P, England P, Martiod J (1993) Mantle dynamics, uplift of the Tibetan Plateau and the Indian monsoon development. Rev Geophy 34: 357-396.
27. Moore RJ (1968) Chromosome numbers and phylogeny in Caragana (Leguminosae). Can J Bot 46: 1513-1522.
28. Nie ZL, Wen J, Azuma H, Qiu YL, Sun H, Meng Y, Sun WB, Zimmer EA (2008) Phylogenetic and biogeographic complexity of Magnoliaceae in the Northern Hemisphere inferred from three nuclear data sets. Mol Phylogen Evol 48: 1027-1040.
29. Night JE, Reed DL (2009) Multigene analysis of phylogenetic relationships and divergence times of primate sucking lice (Phthiraptera: Anoplura). Mol Phylogen Evol 50: 376-390.
30. Nylander JA (2004) MrModeltest ver 2. Program distributed by the author. Evolutionary Biology Centre, Uppsala University, Uppsala.
31. Peng ZG, Ho SYW, Zhang YG, He SP (2006) Uplift of the Tibetan plateau: evidence from divergence times of glyptosternoid catfishes. Mol Phylogen Evol 39: 568-572.
32. Posada D, Crandall KA (1998) Modeltest: testing the model of DNA substitution. Bioinfor 14: 17-818.
33. Qu YH, Ericson PGP, Lei FM, Li SH (2005) Postglacial colonization of the Tibetan plateau inferred from the matrilineal genetic structure of the endemic red-necked snow finch, Pyrgilauda ruficollis. Mol Ecol 6: 1767-1781.
34. 4 grasses in the Late Miocene of Northern Pakistan: evidence from stable isotopes in paleosols. Palaeogeo Palaeoclima Palaeoecol 115: 91-116.
35. Quade J, Cerling TE, Bowman JR (1989) Development of Asian monsoon revealed by marked ecological shift during the latest Miocene in northern Pakistan. Nature 342: 163-165.
36. Renner SS (2005) Relaxed molecular clocks for dating historical plant dispersal events. Trend Plant Sci 10: 550-558.
37. Renner SR, Grimm GW, Schneewei GM, Stuessy TF, Ricklefs RE (2008) Rooting and dating maples (Acer) with an uncorrelated-rates molecular clock: implications for North American/Asian disjunctions. Syst Biol 57: 795-808.
38. Sanchir C (1979) Genus Caragana Lam., systematics, geography, phylogeny and economic significance in study on flora and vegetation of P. R. Mongolia, vol 1. Academic Press, Ulan Bator.
39. Sanderson MJ (2002) Estimating absolute rates of molecular evolution and divergence times: a penalized likelihood approach. Mol Biol Evol 19: 101-109.
40. Shi YF, Tang MC, Ma YZ (1998) The relation of second rising in Qinghai-Xizang Plateau and Asia Monsoon. Sci China D 28: 263-271.
41. Shi YF, Li JJ, Li BY et al (1999) Uplift of the Qinghai-Xizang (Tibetan) Plateau and East Asia environmental change during late Cenozoic. Acta Geogr Sin 54: 10-21.
42. Spicer RA, Harris NBW, Widdowson M et al (2003) Constant elevation of southern Tibet over the past 15 million years. Nature 421: 622-624.
43. Tao JR (1992) The Tertiary vegetation and flora and floristic regions in China. Acta Phytotax Sin 31: 25-43.
44. Verboom GA, Archibald JK, Bakker FT et al (2009) Origin and diversification of the Greater Cape flora: ancient species repository, hot-bed of recent radiation, or both? Mol Phylogen Evol 51: 44-53.
45. 4 photosynthesis. Global Change Biol 14: 2963-2977.
46. Wang AL, Yang MH, Liu JQ (2005) Molecular phylogeny, recent radiation and evolution of gross morphology of the Rhubarb genus Rheum (Polygonaceae) inferred from chloroplast DNA trnL-F sequences. Ann Bot 96: 489-498.
47. Wang YJ, Li XJ, Hao G, Liu JQ (2004) Molecular phylogeny and biogeography of Androsace (Primulaceae) and the convergent evolution of cushion morphology. Acta Phytotax Sin 42: 481-499.
48. Wang YJ, Liu JQ, Miehe G (2007) Phylogenetic origins of the Himalayan endemic Dolomiaea, Diplazoptilon and Xanthopappus (Asteraceae: Cardueae) based on three DNA regions. Ann Bot 99: 311-322.
49. Wang YJ, Susanna A, von Raab-Straube E, Milne M, Liu JQ (2009a) Island-like radiation of Saussurea (Asteraceae: Cardueae) triggered by uplifts of the Qinghai-Tibetan Plateau. Biol J Linn Soc 97: 893-903.
50. Wang LY, Abbott R, Zheng W, Cheng P, Wang YJ, Liu JQ (2009b) History and evolution of alpine plants endemic to the Qinghai-Tibetan Plateau: Aconitum gymnandrum (Ranunculaceae). Mol Ecol 18: 709-721.
51. Welch JJ, Bromham L (2005) Molecular dating when rates vary. Trend Ecol Evol 20: 320-327.
52. Wilson GDF, Humphrey CL, Colgan DJ, Gray K, Johnson RN (2009) Monsoon influenced speciation patterns in a species flock of Eophreatoicus Nicholls (Isopoda; Crustacea). Mol Phylogen Evol 51: 349-364.
53. Wojciechowski MF (2005) Astragalus (Fabaceae): a molecular phylogenetic perspective. Brittonia 57: 382-396.
54. Zhang ML (1997a) The geographic distribution of the genus Caragana in Qinghai-Xizang Plateau and Himalayas. Acta Phytotax Sin 35: 136-147.
55. Zhang ML (1997b) A reconstructing phylogeny in Caragana (Fabaceae). Acta Bot Yunnan 19: 331-341.
56. Zhang ML (1998) A preliminary analytic biogeography in Caragana (Fabaceae). Acta Bot Yunnan 20: 1-11.
57. Zhang ML (2004) Ancestral area analysis of the genus Caragara (Leguminosae). Acta Bot Sin 46: 253-258.
58. Zhang ML (2005) A dispersal and vicariance analysis of the genus Caragana Fabr. J Integ Pl Biol 47: 897-904.
59. Zhang Q, Chiang TY, George M, Liu JQ, Abbott RJ (2005) Phylogeography of the Qinghai-Tibetan Plateau endemic Juniperus przewalskii (Cupressaceae) inferred from chloroplast DNA sequence variation. Mol Ecol 14: 3513-3524.
60. Zhang P, Papenfuss TJ, Wake MH, Qu LH, Wake DB (2008) Phylogeny and biogeography of the family Salamandridae (Amphibia: Caudata) inferred from complete mitochondrial genomes. Mol Phylogen Evol 49: 586-597.
61. Zhang ML, Fritsch PW, Cruz BC (2009a) Phylogeny of Caragana (Fabaceae) based on DNA sequence data from rbcL, trnS-trnG, and ITS. Mol Phylogen Evol 50: 547-559.
62. Zhang XL, Wang XJ, Ge XJ, Yuan YM, Yang HL, Liu JQ (2009b) Molecular phylogeny and biogeography of Gentiana sect. Cruciata (Gentianaceae) based on four chloroplast DNA data sets. Taxon 58: 862-870.
63. Zhao YZ (1993) Taxonomic study of the genus Caragana from China. Acta Sci Nat Univ NeiMong 24: 631-653.
64. Zhong DL, Ding L (1996) The uplifting process and mechanism of Qinghai-Xizang (Tibet) Plateau. Sci China D 26: 289-295.