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Volumn 192, Issue 21, 2010, Pages 5852-5853

Complete genome sequence of the representative γ- hexachlorocyclohexane-degrading bacterium Sphingobium japonicum UT26

Author keywords

[No Author keywords available]

Indexed keywords

LINDANE; INSECTICIDE;

EID: 78049378552     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.00961-10     Document Type: Article
Times cited : (61)

References (17)
  • 1
    • 34147132825 scopus 로고    scopus 로고
    • Identifying bacterial genes and endosymbiont DNA with Glimmer
    • Delcher, A. L., K. A. Bratke, E. C. Powers, and S. L. Salzberg. 2007. Identifying bacterial genes and endosymbiont DNA with Glimmer. Bioinformatics 23:673-679.
    • (2007) Bioinformatics , vol.23 , pp. 673-679
    • Delcher, A.L.1    Bratke, K.A.2    Powers, E.C.3    Salzberg, S.L.4
  • 2
    • 13244265506 scopus 로고    scopus 로고
    • Identification and characterization of genes involved in the downstream degradation pathway of γ-hexachlorocyclohexane in Sphingomonas paucimobilis UT26
    • Endo, R., M. Kamakura, K. Miyauchi, M. Fukuda, Y. Ohtsubo, M. Tsuda, and Y. Nagata. 2005. Identification and characterization of genes involved in the downstream degradation pathway of γ-hexachlorocyclohexane in Sphingomonas paucimobilis UT26. J. Bacteriol. 187:847-853.
    • (2005) J. Bacteriol. , vol.187 , pp. 847-853
    • Endo, R.1    Kamakura, M.2    Miyauchi, K.3    Fukuda, M.4    Ohtsubo, Y.5    Tsuda, M.6    Nagata, Y.7
  • 3
    • 34248336571 scopus 로고    scopus 로고
    • Identification and characterization of genes encoding a putative ABC-type transporter essential for utilization of γ-hexachlorocyclohaxane in Sphingobium japonicum UT26
    • DOI 10.1128/JB.01883-06
    • Endo, R., Y. Ohtsubo, M. Tsuda, and Y. Nagata. 2007. Identification and characterization of genes encoding a putative ABC-type transporter essential for utilization of γ-hexachlorocyclohexane in Sphingobium japonicum UT26. J. Bacteriol. 189:3712-3720. (Pubitemid 46740168)
    • (2007) Journal of Bacteriology , vol.189 , Issue.10 , pp. 3712-3720
    • Endo, R.1    Ohtsubo, Y.2    Tsuda, M.3    Nagata, Y.4
  • 4
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • Ewing, B., L. Hillier, M. C. Wendl, and P. Green. 1998. Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res. 8:175-185.
    • (1998) Genome Res. , vol.8 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 5
    • 0031978181 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. II. Error probabilities
    • Ewing, B., and P. Green. 1998. Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res. 8:186-194.
    • (1998) Genome Res. , vol.8 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 6
    • 4544371669 scopus 로고    scopus 로고
    • Determination of the core of a minimal bacterial gene set
    • Gil, R., F. J. Silva, J. Pereto, and A. Moya. 2004. Determination of the core of a minimal bacterial gene set. Microbiol. Mol. Biol. Rev. 68:518-537.
    • (2004) Microbiol. Mol. Biol. Rev. , vol.68 , pp. 518-537
    • Gil, R.1    Silva, F.J.2    Pereto, J.3    Moya, A.4
  • 7
    • 0031955116 scopus 로고    scopus 로고
    • Consed: A graphical tool for sequence finishing
    • Gordon, D., C. Abajian, and P. Green. 1998. Consed: a graphical tool for sequence finishing. Genome Res. 8:195-202. (Pubitemid 28177231)
    • (1998) Genome Research , vol.8 , Issue.3 , pp. 195-202
    • Gordon, D.1    Abajian, C.2    Green, P.3
  • 8
    • 0000396578 scopus 로고
    • Dehydrochlorination of γ-hexachlorocyclohexane (γ-BHC) by γ-BHC-assimilating Pseudomonas paucimobilis
    • Imai, R., Y. Nagata, K. Senoo, H. Wada, M. Fukuda, M. Takagi, and K. Yano. 1989. Dehydrochlorination of γ-hexachlorocyclohexane (γ-BHC) by γ-BHC-assimilating Pseudomonas paucimobilis. Agric. Biol. Chem. 53:2015-2017.
    • (1989) Agric. Biol. Chem. , vol.53 , pp. 2015-2017
    • Imai, R.1    Nagata, Y.2    Senoo, K.3    Wada, H.4    Fukuda, M.5    Takagi, M.6    Yano, K.7
  • 10
    • 0036211214 scopus 로고    scopus 로고
    • Cloning and characterization of linR, involved in regulation of the downstream pathway for γ-hexachlorocyclohexane degradation in Sphingomonas paucimobilis UT26
    • DOI 10.1128/AEM.68.4.1803-1807.2002
    • Miyauchi, K., H. S. Lee, M. Fukuda, M. Takagi, and Y. Nagata. 2002. Cloning and characterization of linR, involved in regulation of the downstream pathway for γ-hexachlorocyclohexane degradation in Sphingomonas paucimobilis UT26. Appl. Environ. Microbiol. 68:1803-1807. (Pubitemid 34279988)
    • (2002) Applied and Environmental Microbiology , vol.68 , Issue.4 , pp. 1803-1807
    • Miyauchi, K.1    Lee, H.-S.2    Fukuda, M.3    Takagi, M.4    Nagata, Y.5
  • 11
    • 0027598830 scopus 로고
    • Isolation and characterization of Tn5-induced mutants of Pseudomonas paucimobilis UT26 defective in gamma-hexachlorocyclohexane dehydrochlorinase (LinA)
    • Nagata, Y., R. Imai, A. Sakai, M. Fukuda, K. Yano, and M. Takagi. 1993. Isolation and characterization of Tn5-induced mutants of Pseudomonas paucimobilis UT26 defective in gamma-hexachlorocyclohexane dehydrochlorinase (LinA). Biosci. Biotechnol. Biochem. 57:703-709.
    • (1993) Biosci. Biotechnol. Biochem. , vol.57 , pp. 703-709
    • Nagata, Y.1    Imai, R.2    Sakai, A.3    Fukuda, M.4    Yano, K.5    Takagi, M.6
  • 12
    • 34548312340 scopus 로고    scopus 로고
    • Aerobic degradation of lindane (γ-hexachlorocyclohexane) in bacteria and its biochemical and molecular basis
    • Nagata, Y., R. Endo, M. Ito, Y. Ohtsubo, and M. Tsuda. 2007. Aerobic degradation of lindane (γ-hexachlorocyclohexane) in bacteria and its biochemical and molecular basis. Appl. Microbiol. Biotechnol. 76:741-752.
    • (2007) Appl. Microbiol. Biotechnol. , vol.76 , pp. 741-752
    • Nagata, Y.1    Endo, R.2    Ito, M.3    Ohtsubo, Y.4    Tsuda, M.5
  • 13
    • 52649124812 scopus 로고    scopus 로고
    • Genome-Matcher: A graphical user interface for DNA sequence comparison
    • Ohtsubo, Y., W. Ikeda-Ohtsubo, Y. Nagata, and M. Tsuda. 2008. Genome-Matcher: a graphical user interface for DNA sequence comparison. BMC Bioinformatics 9:376.
    • (2008) BMC Bioinformatics , vol.9 , pp. 376
    • Ohtsubo, Y.1    Ikeda-Ohtsubo, W.2    Nagata, Y.3    Tsuda, M.4
  • 14
    • 18044372094 scopus 로고    scopus 로고
    • Biodegradation of hexachlorocyclohexane (HCH) by microorganisms
    • Phillips, T. M., A. G. Seech, H. Lee, and J. T. Trevors. 2005. Biodegradation of hexachlorocyclohexane (HCH) by microorganisms. Biodegradation 16:363-392.
    • (2005) Biodegradation , vol.16 , pp. 363-392
    • Phillips, T.M.1    Seech, A.G.2    Lee, H.3    Trevors, J.T.4
  • 15
    • 33644854755 scopus 로고    scopus 로고
    • Sequence analysis of three plasmids harboured in Rhodococcus erythropolis strain PR4
    • Sekine, M., S. Tanikawa, S. Omata, et al. 2006. Sequence analysis of three plasmids harboured in Rhodococcus erythropolis strain PR4. Environ. Microbiol. 8:334-346.
    • (2006) Environ. Microbiol. , vol.8 , pp. 334-346
    • Sekine, M.1    Tanikawa, S.2    Omata, S.3
  • 16
    • 0002174737 scopus 로고
    • Isolation and identification of an aerobic γ-HCH-decomposing bacterium from soil
    • Senoo, K., and H. Wada. 1989. Isolation and identification of an aerobic γ-HCH-decomposing bacterium from soil. Soil Sci. Plant Nutr. 35:79-87.
    • (1989) Soil Sci. Plant Nutr. , vol.35 , pp. 79-87
    • Senoo, K.1    Wada, H.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.